Web crawling and mRNA sequencing analyze mechanisms of photobiomodulation

Abstract Background Photobiomodulation (PBM) is praised as a promising physical therapy, which has many advantages, such as noninvasive, painless. However, the mechanisms are not fully elucidated. Methods Using web crawling, mRNA sequence and bioinformatics analysis to select genes, functional annotation, and mechanisms. The expressions of inflammatory cytokines were measured using RT-qPCR. Results A total of 146 human genes and 57 pathways were identified about PBM. The 630nm LED-stimulated-MH7A cells were sequenced for further analyzing the mechanism of PBM. 2950 differentially expressed genes were identified, and the gene ontology term enrichment analysis and Kyoto encyclopedia of genes and genomes pathway analysis were performed to better understand functions and pathways. The 12 pathways were matched with the KEGG results of PBM and MH7A cells. A protein-protein interaction network was performed among genes in 12 pathways, and 10 outstanding proteins were identified. Importantly, the 9 genes were predicted with potential research value.And we also demonstrated that expression of inflammatory factors (IL-6, IL-1β, IL-8, and MMP-3) was reduced; meanwhile, the expression of anti-inflammatory factor IL-10 was promoted after 630nm LED. In conclusion, using web crawling, bioinformatics analysis, and mRNA sequence, we obtained 9 key genes and 10 important pathways about PBM. Importantly, we demonstrated the anti-inflammatory effect of 630nm LED red light by RT-qPCR.

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Ulinastatin Activated The ERK5/Mer Signaling Pathway To Promote Macrophage Efferocytosis And Ameliorate Lung Inflammation

10.21203/rs.3.rs-1091035/v1 ◽

2021 ◽

Author(s):

Jinju Li ◽

Rongge Shao ◽

Qiuwen Xie ◽

XueKe Du

Keyword(s):

Lung Injury ◽

Signaling Pathway ◽

Lung Inflammation ◽

Raw264.7 Cells ◽

Inflammatory Factors ◽

Inflammatory Factor ◽

Dependent Manner ◽

Anti Inflammatory

Abstract Purpose:Ulinastatin (UTI) is an endogenous protease inhibitor with potent anti-inflammatory, antioxidant and organ protective effects. The inhibitor has been reported to ameliorate inflammatory lung injury but precise mechanisms remain unclear. Methods: An in vivo model of lung injury has been constructed by intratracheal infusion of lipopolysaccharide (LPS). The number of neutrophils and the phagocytosis of apoptotic neutrophils were observed by Diff- Quick method. Lung injury was observed by HE staining .BALF cells were counted by hemocytometer and concentrations of protein plus inflammatory factors were measured with a BCA test kit. During in vitro experiments, RAW264.7 cells were pretreated with UTI (1000 and 5000U/ mL), stained with CellTrackerTM Green B0DIPYTM and HL60 cells added with UV-induced apoptosis and PKH26 Red staining. The expression of ERK5\Mer related proteins was detected by western blot and immunofluorescence.Results: An in vivo model of lung injury has been constructed by intratracheal infusion of lipopolysaccharide (LPS). UTI treatment enhanced the phagocytotic effect of mouse alveolar macrophages on neutrophils, alleviated lung lesions, decreased the pro-inflammatory factor and total protein content of BALF and increased levels of anti-inflammatory factors. in vitro experiments ，UTI enhanced the phagocytosis of apoptotic bodies by RAW264.7 cells in a dose-dependent manner. Increased expression levels of ERK5 and Mer by UTI were shown by Western blotting and immunofluorescence.Conclusions: UTI mediated the activation of the ERK5/Mer signaling pathway, enhanced phagocytosis of neutrophils by macrophages and improved lung inflammation. The current study indicates potential new clinical approaches for accelerating the recovery from lung inflammation.

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PTPN2 Downregulation Is Associated with Albuminuria and Vitamin D Receptor Deficiency in Type 2 Diabetes Mellitus

Journal of Diabetes Research ◽

10.1155/2018/3984797 ◽

2018 ◽

Vol 2018 ◽

pp. 1-9 ◽

Cited By ~ 3

Author(s):

Li Zheng ◽

Wei Zhang ◽

Aimei Li ◽

Yan Liu ◽

Bin Yi ◽

...

Keyword(s):

Diabetes Mellitus ◽

Type 2 Diabetes ◽

Vitamin D ◽

Type 2 Diabetes Mellitus ◽

Vitamin D Receptor ◽

High Glucose ◽

Inflammatory Factors ◽

Inflammatory Factor ◽

Anti Inflammatory

Objective. Inflammation plays a major role in albuminuria in type 2 diabetes mellitus (T2DM). Our previous studies have shown that the expression of vitamin D receptor (VDR) is downregulated in T2DM which is closely associated with the severity of albuminuria. In this study, we investigated the expression of anti-inflammatory cytokine protein tyrosine phosphatase nonreceptor type 2 (PTPN2) in T2DM and explored its relationship to albuminuria and VDR. Methods. 101 T2DM patients were divided into three groups based on urinary albumin-to-creatinine ratio (uACR): normal albuminuria (uACR < 30 mg/g, n=29), microalbuminuria (30 mg/g ≤ uACR < 300 mg/g, n=34), and macroalbuminuria (uACR ≥ 300 mg/g, n=38). Thirty healthy individuals were included as controls. Serum was analyzed for PTPN2 and IL-6 expression, and peripheral blood mononuclear cells (PBMCs) were analyzed for PTPN2 and VDR expression. THP-1 cells were incubated with high glucose and further treated with or without paricalcitol, a vitamin D analog. The levels of PTPN2, VDR, IL-6, TNFα, and MCP-1 were analyzed. In addition, anti-inflammatory activities of PTPN2 were further explored in THP-1 cells stimulated with high glucose after PTPN2 silencing or overexpression. Results. PTPN2 expression was downregulated in T2DM with the lowest level observed in macroalbuminuria patients. PTPN2 level positively correlated with VDR but negatively correlated with uACR and IL-6. When stimulated with high glucose, there was an increase in inflammatory factors and a decrease in PTPN2 expression. Treatment with paricalcitol reversed these effects. However, paricalcitol failed to exert anti-inflammatory effects in the setting of PTPN2 knockdown. Thus, low levels of PTPN2 aggravated glucose-stimulated inflammation, while high levels of PTPN2 reduced it. Conclusion. PTPN2, an anti-inflammatory factor regulated by VDR, was reduced in T2DM CKD stages 1-2. Taken together, our results suggest that therapeutic strategies that enhance PTPN2 may be beneficial for controlling inflammation in T2DM.

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A Practical Strategy for Exploring the Pharmacological Mechanism of Luteolin Against COVID-19/Asthma Comorbidity: Findings of System Pharmacology and Bioinformatics Analysis

Frontiers in Immunology ◽

10.3389/fimmu.2021.769011 ◽

2022 ◽

Vol 12 ◽

Author(s):

Yi-Zi Xie ◽

Chen-Wen Peng ◽

Zu-Qing Su ◽

Hui-Ting Huang ◽

Xiao-Hong Liu ◽

...

Keyword(s):

Physicochemical Properties ◽

Molecular Mechanisms ◽

Bioinformatics Analysis ◽

Biological Activities ◽

Interaction Network ◽

Enrichment Analysis ◽

World Health ◽

Drug Candidate ◽

Potential Threat ◽

System Pharmacology

Asthma patients may increase their susceptibility to SARS-CoV-2 infection and the poor prognosis of coronavirus disease 2019 (COVID-19). However, anti-COVID-19/asthma comorbidity approaches are restricted on condition. Existing evidence indicates that luteolin has antiviral, anti-inflammatory, and immune regulation capabilities. We aimed to evaluate the possibility of luteolin evolving into an ideal drug and explore the underlying molecular mechanisms of luteolin against COVID-19/asthma comorbidity. We used system pharmacology and bioinformatics analysis to assess the physicochemical properties and biological activities of luteolin and further analyze the binding activities, targets, biological functions, and mechanisms of luteolin against COVID-19/asthma comorbidity. We found that luteolin may exert ideal physicochemical properties and bioactivity, and molecular docking analysis confirmed that luteolin performed effective binding activities in COVID-19/asthma comorbidity. Furthermore, a protein–protein interaction network of 538 common targets between drug and disease was constructed and 264 hub targets were obtained. Then, the top 6 hub targets of luteolin against COVID-19/asthma comorbidity were identified, namely, TP53, AKT1, ALB, IL-6, TNF, and VEGFA. Furthermore, the enrichment analysis suggested that luteolin may exert effects on virus defense, regulation of inflammation, cell growth and cell replication, and immune responses, reducing oxidative stress and regulating blood circulation through the Toll-like receptor; MAPK, TNF, AGE/RAGE, EGFR, ErbB, HIF-1, and PI3K–AKT signaling pathways; PD-L1 expression; and PD-1 checkpoint pathway in cancer. The possible “dangerous liaison” between COVID-19 and asthma is still a potential threat to world health. This research is the first to explore whether luteolin could evolve into a drug candidate for COVID-19/asthma comorbidity. This study indicated that luteolin with superior drug likeness and bioactivity has great potential to be used for treating COVID-19/asthma comorbidity, but the predicted results still need to be rigorously verified by experiments.

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Biodata Mining-based Elucidation of Mechanisms of Hesperetin as a Candidate for Atherosclerosis

10.21203/rs.3.rs-83163/v1 ◽

2020 ◽

Author(s):

Lianzhou Huang ◽

Zexiu Huang ◽

Yuanqiu Chen ◽

Xin Jin ◽

Ji Xiao ◽

...

Keyword(s):

Active Ingredient ◽

Molecular Mechanisms ◽

Fluid Shear Stress ◽

Biological Activities ◽

Interaction Network ◽

Enrichment Analysis ◽

Network Pharmacology ◽

Citrus Aurantium ◽

Wide Range ◽

Anti Inflammatory

Abstract BackgroundHesperetin, an active ingredient derived from Citrus × aurantium L., possesses a wide range of biological activities, including anti-inflammatory, anti-oxidation, and anti-cancer activity. Notably, hesperetin has been proposed as a candidate for atherosclerosis owing to the lipid-regulating and anti-inflammatory effect, while the underlying mechanisms remains obscure.ResultsIn our present study, the pharmacological and molecular properties of hesperetin were first evaluated to determine the druggability of hesperetin. Subsequently, 53 hesperetin-atherosclerosis crossover targets were collected to establish the protein-protein interaction network. The result of Gene Ontology enrichment analysis indicated that the crossover targets were involved in the regulation of lipid metabolism and inflammatory response. Moreover, the Kyoto Encyclopedia of Genes and Genomes pathway analyses demonstrated that the crossover targets were highly correlated with the pathogenesis of atherosclerosis, such as fluid shear stress and atherosclerosis pathway and the TNF signaling pathway. Finally, an entire hesperetin-target-pathway network was constructed to provide a systematic overview of the pharmacological mechanisms of action of hesperetin against atherosclerosis.ConclusionsThe pharmacological mechanisms of actions of hesperetin against atherosclerosis was unveiled based on biodata mining from the public database and the bioinformatics data analysis-based strategy in this study, contributing to a deeper understanding of the molecular mechanisms of hesperetin in the treatment of atherosclerosis. Based on the results of network pharmacology analysis, we can conclude that hesperetin is surely an excellent candidate for atherosclerosis. We believe our work would be beneficial for further research and development of hesperetin as a natural active ingredient derived from Citrus × aurantium L. for the treatment of atherosclerosis.

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Identification of a Transcription Factor-microRNA-Gene Coregulation Network in Meningioma through a Bioinformatic Analysis

BioMed Research International ◽

10.1155/2020/6353814 ◽

2020 ◽

Vol 2020 ◽

pp. 1-13

Author(s):

Juan Wang ◽

Yan Liang ◽

Hui Yang ◽

Jian-Huang Wu

Keyword(s):

Transcription Factor ◽

Transcription Factors ◽

Differentially Expressed Genes ◽

Mirna Gene ◽

Control Sample ◽

Interaction Network ◽

Enrichment Analysis ◽

Differentially Expressed ◽

Pathway Enrichment Analysis ◽

Ontology Term

Background. Meningioma is a prevalent type of brain tumor. However, the initiation and progression mechanisms involved in the meningioma are mostly unknown. This study aimed at exploring the potential transcription factors/micro(mi)RNAs/genes and biological pathways associated with meningioma. Methods. mRNA expressions from GSE88720, GSE43290, and GSE54934 datasets, containing data from 83 meningioma samples and eight control samples, along with miRNA expression dataset GSE88721, which had 14 meningioma samples and one control sample, were integrated analyzed. The bioinformatics approaches were used for identifying differentially expressed genes and miRNAs, as well as predicting transcription factor targets related to the differentially expressed genes. The approaches were also used for gene ontology term analysis and biological pathway enrichment analysis, construction, and analysis of protein-protein interaction network, and transcription factor-miRNA-gene coregulation network construction. Results. Fifty-six upregulated and 179 downregulated genes were identified. Thirty transcription factors able to target the differentially expressed genes were predicted and selected based on public databases. One hundred seventeen overlapping genes were identified from the differentially expressed genes and the miRNAs predicted by miRWalk. Furthermore, NF-κB/IL6, PTGS2, MYC/hsa-miR-574-5p, hsa-miR-26b-5p, hsa-miR-335-5p, and hsa-miR-98-5p, which are involved in the transcription factor-miRNA-mRNA coregulation network, were found to be associated with meningioma. Conclusion. The bioinformatics analysis identified several potential molecules and relevant pathways that may represent critical mechanisms involved in the progression and development of meningioma. This work provides new insights into meningioma pathogenesis and treatments.

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Oral delivery of Lactobacillus paracasei via microcapsule modulates gut health and intestinal microbiota

10.21203/rs.3.rs-885593/v1 ◽

2021 ◽

Author(s):

Ishwari Gyawali ◽

Guilian Zhou ◽

Guli Xu ◽

Yuxian Zeng ◽

Jincheng Li ◽

...

Keyword(s):

Gene Expression ◽

Oral Delivery ◽

Intestinal Barrier ◽

Significant Loss ◽

Lactobacillus Paracasei ◽

Inflammatory Factors ◽

Inflammatory Factor ◽

Gut Health ◽

Crypt Depth ◽

Anti Inflammatory

Abstract Background: The beneficial impact of probiotics on host health is impaired due to the significant loss of survivability during gastric transit, small intestinal enzymes, and bile acids. Encapsulation helps to preserve the probiotics species from severe environmental factors. This study investigated the effects of oral delivery of probiotics via microcapsule on different parameters of gut health. Methods: Lactobacillus paracasei, highly sensitive probiotic species to gastric acid, was encapsulated with novel encapsulating material, polyacrylate resin, to get a microcapsule. C57BL/6 male mice were equally divided into three groups; supplementing basal feed, a mixture of encapsulating material and Lactobacillus paracasei, and encapsulated Lactobacillus paracasei (microcapsule) for four weeks. Fecal moisture percentage was measured regularly, which was elevated in the encapsulated group, but not in the mixed group. Based on this data, mice from control and encapsulated groups were sacrificed to study the different parameters of gut health. Results: Compared to control, encapsulated probiotics increased villi height, the ratio of villi height to crypt depth, and decreased crypt depth. Simultaneously, the tight junction proteins were upregulated on encapsulated group showing enhancement of intestinal barrier functions. The level of SigA and mucin increased along with gene expression of MUC-2 but, albumin level was decreased. In addition, we found a rise in the relative gene expression of anti-inflammatory factor (IL-10) and decreased pro-inflammatory factors (IL-1β, IL-6, IL-8, and TNF-α). Meanwhile, microbiota metabolites, fecal LPS and TMAO were downregulated while SCFA and lactate were upraised compared to control. Furthermore, GSH-Px and TAOC level were increased and MDA was decreased. Microbiota analysis revealed the proportion of firmicutes was higher at the phylum level on an encapsulated group, while Lactobacillus was elevated at the genus level. We also found a remarkable increase in the population of Lactobacillus murinus at the species level. In summary, the oral delivery of probiotics via microcapsule effectively improves the animals' gut health by improving morphology, barrier function, anti-inflammatory action, antioxidant ability and modulating gut microbiota.

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Dimethyl itaconate attenuates CFA-induced inflammatory pain via NLRP3/ IL-1β signaling pathway

10.21203/rs.3.rs-1050454/v1 ◽

2021 ◽

Author(s):

Jiaqi Lin ◽

Jinxuan Ren ◽

Bin Zhu ◽

Yi Dai ◽

Dave Schwinn Gao ◽

...

Keyword(s):

Spinal Cord ◽

Signaling Pathway ◽

Nlrp3 Inflammasome ◽

Inflammatory Pain ◽

Thermal Hyperalgesia ◽

Inflammatory Factors ◽

Vehicle Group ◽

Inflammatory Factor ◽

Anti Inflammatory ◽

Dimethyl Itaconate

Abstract Background Itaconate plays potent anti-inflammatory effects and has gradually been discovered as a promising drug candidate for treating inflammatory diseases. However, its roles and underlying mechanism on pain remain unknown. Methods In the current work, we investigated the effects and mechanisms of dimethyl itaconate (DI, a derivative of itaconate) in a mouse model of complete Freund's adjuvant (CFA)-induced inflammatory pain. Male/Female C57 BL/6 mice were randomly divided into five groups: a vehicle group, an CFA group ,an CFA+PBS group and an CFA + DI(10mg /d and 20 mg/d) group.DI was performed for 11 consecutive days after CFA models were established.Paw withdrawal frequencies and paw withdrawal latencies were used to Behavioral Tests. The activation of macrophages and microglia, the level of proinflammatory cytokine production, the number of M1/M2 macrophages were evaluated .The possible involvement of the NLRP3/ IL-1β signaling pathway was also investigated. Results DI significantly reduced mechanical allodynia and thermal hyperalgesia, decreased peripheral inflammatory cell infiltration and the expression of pro-inflammatory factors IL-1β and TNF-α, and upregulated anti-inflammatory factor IL-10. Interestingly, DI promoted macrophages at the inflammatory site polarization from M1 into M2 type. Additionally, DI inhibited activation of macrophages in dorsal root ganglion (DRG) and microglia in the spinal cord, exhibiting reduced expressions of pro-inflammatory cytokines. Mechanismly, DI exerts the analgesic action primarily via inhibiting the activation of NLRP3 inflammasome complex and the release of IL-1β in derived and resident macrophages in the hind paw, DRG and spinal cord. Conclusion DI could alleviate the pain-like behavior of CFA mice by inhibiting the infiltration of plantar inflammatory cells and macrophages activation in DRG and microglia in the spinal cord. The analgesic behavior of itaconate was related to the inhibition of NLRP3 inflammasome. This study suggested possible evidence for prospective itaconate utilization in the management of inflammatory pain for the first time.

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An Shen Ding Zhi Ling Alleviates Symptoms of Attention Deficit Hyperactivity Disorder via Anti-Inflammatory Effects in Spontaneous Hypertensive Rats

Frontiers in Pharmacology ◽

10.3389/fphar.2020.617581 ◽

2021 ◽

Vol 11 ◽

Author(s):

Yuchen Song ◽

Haixia Yuan ◽

Tianyi Chen ◽

Manqi Lu ◽

Shuang Lei ◽

...

Keyword(s):

Attention Deficit Hyperactivity Disorder ◽

Attention Deficit ◽

Mitogen Activated Protein Kinase ◽

Inflammatory Factors ◽

Morris Water Maze Test ◽

Inflammatory Factor ◽

Hypertensive Rats ◽

Hyperactivity Disorder ◽

Adhd Treatment ◽

Anti Inflammatory

Attention deficit hyperactivity disorder (ADHD) is a childhood-onset chronic neurobehavioral disorder, with multiple genetic and environmental risk factors. Chronic inflammation may be critical for the progression of ADHD. An Shen Ding Zhi Ling (ASDZL) decoction, a traditional Chinese medicine prescription, is clinically used in ADHD treatment. In this study, we investigated the effects and underlying anti-inflammatory mechanisms of ASDZL in young spontaneously hypertensive rats (SHRs), a widely used model of ADHD. SHRs were divided into the SHR model group (vehicle), atomoxetine group (4.56 mg/kg/day) and ASDZL group (21.25 g/kg/day), and orally administered for four weeks. Wistar Kyoto rats were used as controls (vehicle). We found that ASDZL significantly controlled hyperactivity and impulsivity, and improved spatial memory of SHRs in the open field test and Morris water maze test. ASDZL reduced the pro-inflammatory factors interleukin (IL)-1β, IL-4, IL-6, tumor necrosis factor (TNF)-α and monocyte chemoattractant protein (MCP)-1 and increased anti-inflammatory factor IL-10 in SHRs, and decreased the activation of microglia, astrocytes and mast cells in the prefrontal cortex (PFC) and hippocampus. Furthermore, the results indicated that ASDZL inhibited the neuroinflammatory response by protecting the integrity of the blood-brain barrier and suppressing the mitogen-activated protein kinase (MAPK) and nuclear factor (NF)-κB signaling pathways of SHRs. In conclusion, these findings revealed that ASDZL attenuated ADHD symptoms in SHRs by reducing neuroinflammation.

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Identification of CDC25C as a Potential Biomarker in Hepatocellular Carcinoma Using Bioinformatics Analysis

Technology in Cancer Research & Treatment ◽

10.1177/1533033820967474 ◽

2020 ◽

Vol 19 ◽

pp. 153303382096747

Author(s):

Ruifeng Xun ◽

Hougen Lu ◽

Xianwang Wang

Keyword(s):

Hepatocellular Carcinoma ◽

Bioinformatics Analysis ◽

Disease Free Survival ◽

Interaction Network ◽

Enrichment Analysis ◽

Normal Liver ◽

High Rate ◽

Specific Gene ◽

Ppi Networks ◽

Potential Biomarker

Hepatocellular carcinoma (HCC) is the most aggressive type of gastrointestinal tumor, with a high rate of mortality. However, identifying biomarkers for the treatment of HCC remains to be developed. We aimed to determine whether cell division cycle 25C (CDC25C) could be used as a novel diagnostic and therapeutic biomarker in HCC. Expression of CDC25C in HCC was analyzed by using GEPIA (Gene Expression Profiling Interactive Analysis) and UALCAN databases. GEPIA and CBioPortal databases were applied to analyze patients’survival and CDC25C mutations, respectively. PPI (Protein-Protein Interaction) network was further built by STRING (Search Tool for the Retrieval of Interacting Genes) and Metascape Web portals. To the best of our knowledge, the novel observations identified in the present study reveal that the expression of CDC25C in HCC was significantly enhanced when compare to that in normal liver tissues (P < 0.001). A higher CDC25C expression resulted in a remarkably shorter disease free survival as well as overall survival. Moreover, the expression of CDC25C in HCC was related to HCC patients’grade and race, but not gender. The expression levels of CDC25C elevated gradually from stage 1 to 3 but decreased in stage 4. The specific gene mutations V41A, L87 H, N222 K and X309-splice of CDC25C occurred in HCC samples and these unique mutations were not detected in any other tumor tissues. Finally, PPI networks and GO enrichment analysis suggested that CDC25C might be associated with cell cycle and p53 signaling pathway. Taken together, bioinformatics analysis revealed that CDC25C might be a potential diagnostic predictor for HCC.

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Bioinformatics Analysis and Identification of Potential Biomarkers in Gastric Cancer

10.21203/rs.3.rs-111288/v1 ◽

2020 ◽

Author(s):

Jingdi Yang ◽

Bo Peng ◽

Xianzheng Qin ◽

Tian Zhou

Keyword(s):

Gene Expression ◽

Gastric Cancer ◽

Differentially Expressed Genes ◽

Bioinformatics Analysis ◽

Interaction Network ◽

Enrichment Analysis ◽

Differentially Expressed ◽

Hub Genes ◽

Protein Protein Interaction ◽

Protein Protein Interaction Network

Abstract Background: Although the morbidity and mortality of gastric cancer are declining, gastric cancer is still one of the most common causes of death. Early detection of gastric cancer is of great help to improve the survival rate, but the existing biomarkers are not sensitive to diagnose early gastric cancer. The aim of this study is to identify the novel biomarkers for gastric cancer.Methods: Three gene expression profiles (GSE27342, GSE63089, GSE33335) were downloaded from Gene Expression Omnibus database to select differentially expressed genes. Then, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analysis were performed to explore the biological functions of differentially expressed genes. Cytoscape was utilized to construct protein-protein interaction network and hub genes were analyzed by plugin cytoHubba of Cytoscape. Furthermore, Gene Expression Profiling Interactive Analysis and Kaplan-Meier plotter were used to verify the identified hub genes.Results: 35 overlapping differentially expressed genes were screened from gene expression datasets, which consisted of 11 up-regulated genes and 24 down-regulated genes. Gene Ontology functional enrichment analysis revealed that differentially expressed genes were significantly enriched in digestion, regulation of biological quality, response to hormone and steroid hormone, and homeostatic process. Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed differentially expressed genes were enriched in the secretion of gastric acid and collecting duct acid, leukocyte transendothelial migration and ECM-receptor interaction. According to protein-protein interaction network, 10 hub genes were identified by Maximal Clique Centrality method.Conclusion: By using bioinformatics analysis, COL1A1, BGN, THY1, TFF2 and SST were identified as the potential biomarkers for early detection of gastric cancer.

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