Cost Effective Acoustic Monitoring of Bird Species

Author(s):  
Ciira wa Maina
2019 ◽  
Vol 6 (1) ◽  
Author(s):  
René Oswaldo Silva-Castillo ◽  
Samuel Flores-Ceballos ◽  
Adriana Margarita Ducoing-Watty ◽  
Ricardo Itzcóatl Maldonado-Reséndiz

Ocular diseases are sub-diagnosed in bird species, partly because of limited diagnostic methods and lack of reference data. Placement of Schirmer tear test strips in the bottom of the conjunctival sac of birds for tear flow measurement can prove to be difficult, whereas paper tips commonly used for dental procedures may be easier to use, due to a more adequate size and shape. Hence, the aim of this study was to assess and compare tear flow values, using ABC Dental® # 30 color paper tips and TearFloTM Test strips in Red-lored Parrots (Amazona autumnalis) (n = 26). Captive birds of undetermined sex were housed in groups under similar environmental conditions and fed the same diet. All animals were deemed healthy through remote and physical examinations. Average tear flow values of 0.6365 ± 0.032 cm/min and 0.5942 ± 0.032 cm/min were obtained with the Schirmer strips test and the endodontic tips respectively. Lack of difference in observed values between measurement techniques (p = 0.3629) indicates that endodontic tips may be a good alternative for tear flow assessment in Red-lored parrots. In addition, endodontic tips are more cost effective and may be less invasive. This study stresses the need to establish species specific ophthalmic reference values for clinical practice in birds, since differences have been reported even in specimens within the same genus.Figure 1. Measurement of tear flow in Red-lored parrots using TearFloTM Test Strips


2012 ◽  
Vol 39 (6) ◽  
pp. 469 ◽  
Author(s):  
Joanne M. Hoare ◽  
Adrian Monks ◽  
Colin F. J. O'Donnell

Context Many conservation decisions rely on the assumption that multiple populations will respond similarly to management. However, few attempts have been made to evaluate correlated population responses to management or to identify traits that could be used to predict correlations. These assumptions are central to the use of the ‘population indicator-species concept’ (the idea that population trends of one species can be used as an index of trends in other species) for measuring the effects of key ecological drivers. Aims We investigated correlations among bird population trends in a mixed podocarp–hardwood forest in New Zealand in which introduced mammalian pests are controlled. We analysed trends in the abundance of 18 bird species (primarily passerines) over a 10-year period, using data from 5-min bird counts. Methods We used a Bayesian modelling approach to identify short-term correlations in population trends among species and to investigate whether ecological traits can be used to predict these correlated trends. Key results Population increases were detected in 9 of the 18 bird species over the 10-year period of the study. Population trends were correlated for 10% of species pairs (of which 81% were positive correlations). Correlations among seven of the nine species that increased in abundance were always positive; these species form a potential indicator pool. However, traits were not useful for predicting correlated population trends. Conclusions Bird species affected by a shared ecological driver (predation) can exhibit correlated population trends when introduced predators are controlled, but correlations cannot be predicted by similarity in ecological traits. Implications We advocate for testing consistency of correlations at multiple sites so as to validate the evidence-based use of the population indicator-species concept as a cost-effective alternative to monitoring whole communities.


Author(s):  
Hanna Pamula ◽  
Agnieszka Pocha ◽  
Maciej Klaczynski

Every year billions of birds migrate between their breeding and wintering areas. As birds are an important indicator in nature conservation, migratory bird studies have been conducted for many decades, mostly by bird-ringing programmes and direct observation. However, most birds migrate at night, and therefore much information about their migration is lost. Novel methods have been developed to overcome this difficulty; including thermal imaging, radar, geolocation techniques, and acoustic recognition of bird calls. Many bird species are detected by their characteristic sounds. This method of identification occurs more often than by direct observation, and therefore recordings are widely used in avian research. The commonly used approach is to record the birds automatically, and to manually study the bird sounds in the recordings afterwards (Furnas and Callas 2015, Frommolt 2017). However, the tagging of recordings is a tedious and time-consuming process that requires expert knowledge, and, as a result, automatic detection of flight calls is in high demand. The first experiments towards this used energy thresholds or template matching (Bardeli et al. 2010, Towsey et al. 2012), and later on the machine and deep learning methods were applied (Stowell et al. 2018). Nevertheless, not many studies have focused specifically on night flight calls (Salamon et al. 2016, Lostanlen et al. 2018). Such acoustic monitoring could complement daytime avian research, especially when the field recording station is close to the bird-ringing station, as it is in our project. In this study, we present the initial results of a long-term bird audio monitoring project using automatic methods for bird detection. Passive acoustic recorders were deployed at a narrow spit between a lake and the Baltic sea in Dąbkowice, West Pomeranian Voivodeship, Poland . We recorded bird calls nightly from sunset till sunrise during the passerine autumn migration for 3 seasons. As a result, we collected over 3000 hours of recordings each season. We annotated a subset of over 50 hours, from different nights with various weather conditions. As avian flight calls are sporadic and short, we created a balanced set for training - recordings were divided into partially overlapping 500-ms clips, and we retained all clips containing calls and created about the same number of clips without bird sounds. Different signal representations were then examined (e.g. mel-spectrograms and multitaper). Afterwards, various convolutional neural networks were checked and their performance was compared using the area under the receiver operating characteristic curve (AUC) measure. Moreover, an initial attempt was made to take advantage of the transfer learning from image classification models. The results obtained by the deep learning methods are promising (AUC exceeding 80%), but higher bird detection accuracy is still needed. For a chosen bird species – Song thrush (Turdus philomelos) – we observed a correlation between calls recorded at night and birds caught in the nets during the day. This fact, as well as the promising results from the detection of calls from long-term recordings, indicate that acoustic monitoring of nocturnal birds has great potential and could be used to supplement the research of the phenomenon of seasonal bird migration.


Author(s):  
David J. X. TAN ◽  
Ding Li YONG ◽  
Bing Wen LOW ◽  
Alan OWYONG ◽  
Alfred CHIA

Although urban spaces are increasingly recognised as viable habitats for wildlife, cities remain a major source of anthropogenic mortality for wild birds. While the sources of urban avian mortalities have been well documented in North America, these phenomena remain poorly studied in Southeast Asia, especially for resident species. Here we present the first summary of non-migratory urban bird mortalities for the heavily urbanised island of Singapore. We conducted a citizen science study using print and social media outreach to encourage members of the public to report their observations of dead birds between November 2013 and October 2017, and collected a total of 362 mortality records across 65 resident bird species and five mortality sources. Our results show that a diverse array of bird species is directly impacted by anthropogenic sources of mortality, although mortalities stemming from roadkill and cat predation are likely to be undersampled. We also find that forest-edge frugivores such as the Pink-necked Green Pigeon are likely to be especially vulnerable to building collisions. Our study shows that despite its limitations, opportunistic sampling using citizen science can generate large amounts of ecological data at relatively low cost, and serve as a cost-effective complement to standardised survey methodologies.


2016 ◽  
Author(s):  
Ciira wa Maina ◽  
David Muchiri ◽  
Peter Njoroge

AbstractWith the increasing need to effectively monitor a growing number of ecosystems of interest due to risks posed to these ecosystems by human activity and climate change, novel approaches to biodiversity monitoring are needed. In this work we demonstrate the application of low cost acoustic recorders based on the Raspberry Pi microprocessor to biodiversity monitoring. The recorders are capable of capturing audio recordings from which we can compute acoustic indices of biodiversity and identify bird species of interest. We compare the acoustic indices of biodiversity and results of point counts aimed at determining bird species presence and find that the acoustic complexity index has a significant positive correlation to point count results. In addition, we show that the presence of the Hartlaub’s Turaco, a ubiquitous species in montane forests in Kenya with a distinct call, can be automatically determined using recordings obtained using our setup. Montane species are of interest for long-term automatic monitoring since they are particularly vulnerable to the effects of climate change. Our system is able to deal with the large amounts of data generated by the acoustic recorders. The automatic screening of approximately five hours of recordings for presence of the Hartlaub’s Turaco call is achieved in approximately three minutes representing a large time saving that makes use of audio recordings for species identification feasible.


2011 ◽  
Vol 22 (1) ◽  
pp. 94-105 ◽  
Author(s):  
CATHERINE A. LINDELL ◽  
REBECCA J. COLE ◽  
KAREN D. HOLL ◽  
RAKAN A. ZAHAWI

SummaryTropical land cover change has negatively affected numerous migratory bird populations. Forest restoration can augment migrant wintering habitat. However, almost no information exists about factors that influence migrant use of tropical restoration sites. We sampled migrant birds in young restoration sites in Costa Rica from February 2006 to April 2008 to determine how vegetation height, planting design, season, and landscape forest cover influenced capture rates of four declining species. We also documented total numbers of migratory species and individuals captured in each planting design treatment; each site had a control treatment where seedlings were not planted, an island treatment where seedlings were planted in patches, and a plantation treatment where seedlings were planted to cover the entire area. Sites varied in landscape forest cover within 500 m buffers. Three out of four focal species were captured significantly more often in plantation treatments than island or control treatments. Two of the four species showed seasonal patterns and one species was captured more often in high-vegetation sites. Greater numbers of species and individuals were captured in plantation treatments compared to island and control treatments. The plantation planting design increased migrant use more quickly than the island planting design. When resources are available, we recommend planting plantation-style to rapidly increase the value of restoration sites to a range of species, particularly those that use woody vegetation. When resources are more limited, planting islands may be a cost-effective, although not as ecologically effective, alternative that supports a diversity of migrant species compared to unplanted controls.


Author(s):  
Charles A Muirhead

All river dolphin species are in decline as a direct result of intensified anthropogenic activity along river systems. In South America, the size and geographical complexity of their range pose a challenge to status assessment. Passive acoustic monitoring offers a cost-effective, scalable, and readily standardized method for determining species distribution and can augment the spatiotemporal coverage of visual survey efforts currently underway. A passive acoustic survey of dolphin presence was conducted in two areas of the Amazon River subject to different degrees of human use; the inland port city Iquitos and the Pacaya-Samiria National Reserve, in Peru. Surveys were based on acoustic detection of biosonar activity. Recorders were distributed at 17 sites along 61 linear km of river habitat for durations of 46 to 148 h. Dolphin presence was 45% lower near the city than in the reserve. This study demonstrates the efficacy of acoustic monitoring as a method for testing dolphin redistribution and/or decline hypotheses in the context of anthropogenic development. The methods are applicable to continuous future monitoring and status assessment of river dolphins in South America as well as in Asia.


2012 ◽  
Vol 141 (5) ◽  
pp. 1050-1060 ◽  
Author(s):  
C. U. R. SCHOENE ◽  
C. STAUBACH ◽  
C. GRUND ◽  
A. GLOBIG ◽  
M. KRAMER ◽  
...  

SUMMARYPrevalence monitoring of avian influenza in wild bird populations is important to estimate risks for the occurrence of potentially zoonotic and economically disastrous outbreaks of highly pathogenic avian influenza virus (AIV) in poultry worldwide. A targeted, cost-effective monitoring method for AIV in wild birds was developed, which is based on monitoring results for AIV in Germany and information on the distribution and abundance of wild bird species in selected habitat types. Spatial data were combined with virological and outbreak data for the period of 1 January 2006 to 31 December 2010. Using Germany as an example, we identified 11 indicator species. By concentrating monitoring efforts on these species in spatially confined locations, we propose a targeted and more cost-effective risk-based AIV monitoring approach that can be adapted universally for the identification of wild bird indicator species worldwide with the perspective of reducing sample sizes (and costs) without impairing the validity of the results.


Oryx ◽  
2017 ◽  
Vol 54 (1) ◽  
pp. 62-73 ◽  
Author(s):  
S.R. Wotton ◽  
M.A. Eaton ◽  
D. Sheehan ◽  
F. Barasa Munyekenye ◽  
I.J. Burfield ◽  
...  

AbstractBiodiversity indicators are essential for monitoring the impacts of pressures on the state of nature, determining the effectiveness of policy responses, and tracking progress towards biodiversity targets and sustainable development goals. Indicators based on trends in the abundance of birds are widely used for these purposes in Europe and have been identified as priorities for development elsewhere. To facilitate this we established bird population monitoring schemes in three African countries, based on citizen science approaches used in Europe, aiming to monitor population trends in common and widespread species. We recorded > 500 bird species from c. 450 2-km transects in Botswana, > 750 species from c. 120 transects in Uganda, and > 630 species from c. 90 transects in Kenya. Provisional Wild Bird Indices indicate a strong increase in bird populations in Botswana and a small decrease in Uganda. We also provide comparisons between trends of habitat generalists and specialists, of birds within and outside protected areas, and between Afro-Palearctic migrants and resident birds. Challenges encountered included recruiting, training and retaining volunteer surveyors, and securing long-term funding. However, we show that with technical support and modest investment (c. USD 30,000 per scheme per year), meaningful biodiversity indicators can be generated and used in African countries. Sustained resourcing for the existing schemes, and replication elsewhere, would be a cost-effective way to improve our understanding of biodiversity trends globally, and measure progress towards environmental goals.


2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Xiao Huang ◽  
Yanyan Zhao ◽  
Yang Liu

AbstractThe Beijing Swift (Apus apus pekinensis) is a typical cavity-nesting bird that often nests inside holes and crevices in old architectures. Direct observation of their breeding behaviour is challenging and their breeding ecology is thus poorly studied. In this study, we analysed light-level geolocation data collected from six Beijing Swifts for the first time. Our results showed that geolocators can make comprehensive inference of their incubation period and behaviour. As a cost-effective and non-invasive method, geolocators can not only facilitate discovering migration routes, but also can be widely applied in the study of avian reproductive behaviour, especially in cavity-nesting bird species. We further discussed the characteristics and merits of this method and compared with other conventional nest-monitoring methods in recording birds.


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