scholarly journals Molecular Diversity of Chlorpyrifos Degrading Bacteria Isolated from Apple Orchard Soils of Himachal Pradesh

2021 ◽  
Author(s):  
Anish Kumar Sharma ◽  
Jyotsana Pandit ◽  
Khyati Harkhani
Keyword(s):  
Molecular Diversity ◽  
Enrichment Culture ◽  
Biochemical Properties ◽  
Culture Technique ◽  
Apple Orchard ◽  
Bacterial Isolates ◽  
Degrading Bacteria ◽  
Pure Cultures ◽  
High Concentrations ◽  
Orchard Soils

A total of seventy-two bacterial isolates were obtained employing enrichment culture technique from apple orchard soils contaminated with chlorpyrifos. Pure cultures of bacterial isolates were obtained using streak plate method on mineral salt medium. Bacterial isolates were characterized on the basis of morphology, culture and biochemical properties. Six bacterial isolates exhibited high extracellular organophosphorus hydrolase activity along with high tolerance towards high concentrations of chlorpyrifos. Genomic DNA extraction from bacterial isolates was done with phenol/chloroform method. Molecular Diversity of six chlorpyrifos degrading bacterial isolates was done employing RAPD-PCR technique by using 25 decamer primers, where amplification was showed by only 20 primers. A total of 337 amplified bands and 64 unique bands ranging in size from 100 to 4900bps were produced after RAPD analysis. The similarity coefficient estimated by Jaccard’s coefficient for these bacterial isolates was found to range between 31 to 64 percent.

scholarly journals Physical and Biochemical Properties of Apple Orchard Soils of Different Productivities

2015 ◽  
Vol 05 (07) ◽  
pp. 149-156 ◽  
Author(s):  
Takamitsu Kai ◽  
Masaki Mukai ◽  
Kiwako S. Araki ◽  
Dinesh Adhikari ◽  
Motoki Kubo
Keyword(s):  
Biochemical Properties ◽  
Apple Orchard ◽  
Orchard Soils

scholarly journals Microbial degradation of polyethylene (PE)

2009 ◽  
Vol 27 (1) ◽  
pp. 66 ◽  
Author(s):  
Kiran Kumari ◽  
R. C. Aanad ◽  
Neeru Narula
Keyword(s):  
Degradation Rate ◽  
Enrichment Culture ◽  
Culture Technique ◽  
Bacterial Activity ◽  
Low Density Polyethylene ◽  
Co2 Evolution ◽  
Bacterial Isolates ◽  
Gram Negative ◽  
Soil Burial ◽  
Compost Treatment

Thirty two bacterial isolates were obtained from soil by soil burial method followed by enrichment culture technique in film culturing (FC) media. Bacterial isolates differing in morphology were selected, purified and maintained at 4°C. Thirty % of these isolates were found to be Gram negative and 50% showed positive starch hydrolysis test and were screened for their ability to degrade Low Density Polyethylene (untreated, UV and heat strips) in film culturing media and percent weight loss of polyethylene after 4th week was determined. Among various isolates, highest degradation was by Is 3, Is 22 and Is 31 to the range of 25–27%, of UV treated polyethylene strips. High temperature (40°C), was found to enhance degradation rate of polyethylene more effectively by 24–28% compared to low temperature at 30°C (18–21%). Degradation of treated polyethylene strips (UV, heat steam) was up to 4% by compost treatment as studied by using CO2 evolution, an estimation tool to analyze % degradation. Bacterial activity was also affected by various environmental factors like sunlight, temperature, oxygen etc.

scholarly journals Screening for Urease-Producing Bacteria from Limestone Caves of Sarawak

2016 ◽  
Vol 6 (1) ◽  
pp. 37-45 ◽  
Author(s):  
Armstrong Ighodalo Omoregie ◽  
Nurnajwani Senian ◽  
Phua Ye Li ◽  
Ngu Lock Hei ◽  
Dominic Ong Ek Leong ◽  
...  
Keyword(s):  
Chemical Reaction ◽  
Urease Activity ◽  
Enrichment Culture ◽  
Culture Technique ◽  
Bacterial Isolates ◽  
Bacterial Strains ◽  
Calcite Precipitation ◽  
Microbially Induced Calcite Precipitation ◽  
Key Enzyme ◽  
Urease Production

Urease is a key enzyme in the chemical reaction of microorganism and has been found to be associated withcalcification, which is essential in microbially induced calcite precipitation (MICP) process. Three bacterialisolates (designated as LPB19, TSB31 and TSB12) were among twenty-eight bacteria that were isolated fromsamples collected from Sarawak limestone caves using the enrichment culture technique. Isolates LPB19, TSB31and TSB12 were selected based on their quick urease production when compared to other isolates. Phenotypiccharacteristics indicate all three bacterial strains are gram-positive, rod-shaped, motile, catalase and oxidasepositive. Urease activity of the bacterial isolates were measured through changes in conductivity in the absence ofcalcium ions. The bacterial isolates (LPB19, TSB12 and TSB31) showed urease activity of 16.14, 12.45 and 11.41mM urea hydrolysed/min respectively. The current work suggested that these isolates serves as constitutiveproducers of urease, potentially useful in inducing calcite precipitates.

scholarly journals Anaerobic Biotransformation of High Concentrations of Chloroform by an Enrichment Culture and Two Bacterial Isolates

2010 ◽  
Vol 76 (19) ◽  
pp. 6463-6469 ◽  
Author(s):  
Huifeng Shan ◽  
Harry D. Kurtz ◽  
Nadia Mykytczuk ◽  
Jack T. Trevors ◽  
David L. Freedman
Keyword(s):  
Enrichment Culture ◽  
Vitamin B ◽  
Bacterial Isolates ◽  
Mineral Salts ◽  
Corn Syrup ◽  
Contaminant Source ◽  
Molar Basis ◽  
Anaerobic Biotransformation ◽  
End Products ◽  
High Concentrations

ABSTRACT A fermentative enrichment culture (designated DHM-1) was developed that is capable of cometabolically biotransforming high concentrations of chloroform (CF) to nontoxic end products. Two Pantoea spp. were isolated from DHM-1 that also possess this dechlorination capability. Following acclimation to increasing levels of CF, corn syrup-grown DHM-1 was able to transform over 500 mg/liter CF in the presence of vitamin B12 (approximately 3% of CF on a molar basis) at a rate as high as 22 mg/liter/day in a mineral salts medium. CO, CO2, and organic acids were the predominant biodegradation products, suggesting that hydrolytic reactions predominate during CF transformation. DHM-1 was capable of growing on corn syrup in the presence of high concentrations of CF (as may be present near contaminant source zones in groundwater), which makes it a promising culture for bioaugmentation. Strains DHM-1B and DHM-1T transform CF at rates similar to that of the DHM-1 enrichment culture. The ability of these strains to grow in the presence of high concentrations of CF appears to be related to alteration of membrane fluidity or homeoviscous and homeophasic adaptation.

scholarly journals Characterizations of novel pesticide-degrading bacterial strains from industrial wastes found in the industrial cities of Pakistan and their biodegradation potential

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e12211
Author(s):  
Noreen Asim ◽  
Mahreen Hassan ◽  
Farheen Shafique ◽  
Maham Ali ◽  
Hina Nayab ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Enrichment Culture ◽  
Culture Technique ◽  
Industrial Wastes ◽  
Bacterial Strains ◽  
Isolation And Identification ◽  
16S Rrna Analysis ◽  
Degrading Bacteria ◽  
Considerable Degradation ◽  
Different Strains

Background Lack of infrastructure for disposal of effluents in industries leads to severe pollution of natural resources in developing countries. These pollutants accompanied by solid waste are equally hazardous to biological growth. Natural attenuation of these pollutants was evidenced that involved degradation by native microbial communities. The current study encompasses the isolation of pesticide-degrading bacteria from the vicinity of pesticide manufacturing industries. Methods The isolation and identification of biodegrading microbes was done. An enrichment culture technique was used to isolate the selected pesticide-degrading bacteria from industrial waste. Results Around 20 different strains were isolated, among which six isolates showed significant pesticide biodegrading activity. After 16S rRNA analysis, two isolated bacteria were identified as Acinetobacter baumannii (5B) and Acidothiobacillus ferroxidans, and the remaining four were identified as different strains of Pseudomonas aeruginosa (1A, 2B, 3C, 4D). Phylogenetic analysis confirmed their evolution from a common ancestor. All strains showed distinctive degradation ability up to 36 hours. The Pseudomonas aeruginosa strains 1A and 4D showed highest degradation percentage of about 80% for DDT, and P. aeruginosa strain 3C showed highest degradation percentage, i.e., 78% for aldrin whilst in the case of malathion, A. baumannii and A. ferroxidans have shown considerable degradation percentages of 53% and 54%, respectively. Overall, the degradation trend showed that all the selected strains can utilize the given pesticides as sole carbon energy sources even at a concentration of 50 mg/mL. Conclusion This study provided strong evidence for utilizing these strains to remove persistent residual pesticide; thus, it gives potential for soil treatment and restoration.

scholarly journals Isolation and Molecular Characterization of Pesticide Degrading Bacteria in Polluted Soil

2020 ◽  
Author(s):  
Kehinde Sowunmi ◽  
Suliat Morenike Shoga ◽  
Oluwabukola Mabel Adewunmi ◽  
Adewale Felix Oriyomi ◽  
Lukman Sowunmi
Keyword(s):  
Enrichment Culture ◽  
Lethal Effect ◽  
Living System ◽  
Culture Technique ◽  
Bacterial Strains ◽  
High Concentration ◽  
Degrading Bacteria ◽  
Quality Check ◽  
Pure Bacterial Cultures

AbstractPesticides are the substances for preventing, destroying, repelling any pest. Due to bulk handling or accidental release, they are accumulated in soil which leads to occasional entry into ecosystem that shows lethal effect on living system. An enrichment culture technique was used to isolate bacterial strains from organophosphate soil degrading high concentration of the selected pesticides. Five pure bacterial cultures were isolated. All five isolates were characterized on the basis of molecular and biochemical features like biodegradation test and substrate specificity, phosphate solubilization and screened for pesticide residue, pH, and extraction of DNA, quantity and quality check and salt tolerance. The organophosphate isolates were also tested for quantitative production. The screening of pesticide tolerance was done at for fungicides and insecticides.

Biodegradation of organophosphorus Pollutants by Soil Bacteria: Biochemical Aspects and Unsolved Problems

2020 ◽  
Vol 36 (4) ◽  
pp. 126-135
Author(s):  
T.V. Shushkova ◽  
D.O. Epiktetov ◽  
S.V. Tarlachkov ◽  
I.T. Ermakova ◽  
A.A. Leontievskii
Keyword(s):  
Genome Sequencing ◽  
Soil Bacteria ◽  
Activity Regulation ◽  
Bacterial Isolates ◽  
Bacterial Strains ◽  
Russian Science ◽  
Degrading Bacteria ◽  
Phosphorus Source ◽  
Glyphosate Herbicide ◽  
Enzymatic Pathways

The degradation of persistent organophosphorus pollutants have been studied in 6 soil bacterial isolates and in 3 bacterial strains adapted for utilization of glyphosate herbicide (GP) under laboratory conditions. Significant differences in the uptake of organophosphonates were found in taxonomically close strains possessing similar enzymatic pathways of catabolism of these compounds, which indicates the existence of unknown mechanisms of activity regulation of these enzymes. The effect of adaptation for GP utilization as a sole phosphorus source on assimilation rates of several other phosphonates was observed in studied bacteria. The newly found efficient stains provided up to 56% of GP decomposition after application to the soil in the laboratory. The unresolved problems of microbial GP metabolism and the trends for further research on the creation of reliable biologicals capable of decomposing organophosphonates in the environment are discussed. organophosphonates, glyphosate, biodegradation, bioremediation, C-P lyase, phosphonatase, degrading bacteria Investigation of phosphonatase and genome sequencing were supported by Russian Science Foundation Grant no. 18-074-00021.

scholarly journals The Sustainable Production of a Novel Laccase from Wheat Bran by Bordetella sp. JWO16: Toward a Total Environment

Catalysts ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 677
Author(s):  
John Onolame Unuofin
Keyword(s):  
Wheat Bran ◽  
Contaminated Soils ◽  
Residual Activity ◽  
Dye Decolorization ◽  
Fermentation Medium ◽  
Biochemical Properties ◽  
Synthetic Dyes ◽  
High Concentrations ◽  
Capital Intensive ◽  
Agroindustrial Residue

Laccase is increasingly adopted in diverse industrial and environmental applications, due to its readily accessible requirements for efficient catalytic synthesis and biotransformation of chemicals. However, it is perceived that its industrial production might incur some unfavorable overhead, which leads to expensive market products, and the corresponding negative environmental feedback, due to the use of capital-intensive and precarious chemicals. To this end, this study was designed to evaluate the performance indicators of the valorization of wheat bran by a novel Jb1b laccase and its subsequent application in waste minimization and water management, on a laboratory scale. Optimal Jb1b laccase was produced in submerged fermentation medium containing wheat bran, an agroindustrial residue, through response surface methodology (RSM) algorithm, and was applied in dye decolorization and denim bioscouring, respectively. Results showed that the resultant enzyme manifested unique biochemical properties, such as enhanced tolerance at certain physicochemical conditions, with a residual activity of at least ca. 76%. Furthermore, phenomenally high concentrations of synthetic dyes (0.2% w v−1) were decolorized over 56 h, and a 6 h mediator-supported simultaneous denim bleaching and decolorization of wash effluent was observed. The sustainability of the production and application processes were inferred from the reusability of the fermentation sludge as a potential biofertilizer, with subsequent prospects for the biostimulation and bioaugmentation of contaminated soils, whereas the decolorized water could be adopted for other uses, amongst which horticulture and forestry are typical examples. These phenomena therefore authenticate the favorable environmental feedbacks and overhead realized in this present study.

scholarly journals Broad diversity of bacteria degrading 17ß-estradiol-3-sulfate isolated from river sediment and biofilm at a wastewater treatment plant discharge

2021 ◽  
Author(s):  
Tamara Mainetti ◽  
Marilena Palmisano ◽  
Fabio Rezzonico ◽  
Blaž Stres ◽  
Susanne Kern ◽  
...  
Keyword(s):  
Wastewater Treatment ◽  
River Sediment ◽  
Wastewater Treatment Plants ◽  
Treatment Plant ◽  
Aquatic Environments ◽  
Bacterial Isolates ◽  
Degrading Bacteria ◽  
17Β Estradiol ◽  
Aquatic Wildlife ◽  
Harmful Effects

AbstractConjugated estrogens, such as 17β-estradiol-3-sulfate (E2-3S), can be released into aquatic environments through wastewater treatment plants (WWTP). There, they are microbiologically degraded into free estrogens, which can have harmful effects on aquatic wildlife. Here, the degradation of E2-3S in environmental samples taken upstream, downstream and at the effluent of a WWTP was assessed. Sediment and biofilm samples were enriched for E2-3S-degrading microorganisms, yielding a broad diversity of bacterial isolates, including known and novel degraders of estrogens. Since E2-3S-degrading bacteria were also isolated in the sample upstream of the WWTP, the WWTP does not influence the ability of the microbial community to degrade E2-3S.

Isolation and Characterization of Cellulose Degrading Bacteria of Termite Gut from North Eastern Region of India

2016 ◽  
Vol 5 (6) ◽  
pp. 283-290
Author(s):  
Sonika Sharma ◽  
Soumya Chatterjee ◽  
Sibnarayan Datta ◽  
Rajesh Kumar Prasad ◽  
Angkita Sharma ◽  
...  
Keyword(s):  
Agar Plate ◽  
Bacterial Consortium ◽  
Cellulase Production ◽  
Eastern Region ◽  
Bacterial Isolates ◽  
Carbohydrate Utilization ◽  
North East ◽  
Isolation And Characterization ◽  
Degrading Bacteria ◽  
Termite Gut

A study was conducted to screen and isolate cellulase producing bacteria of termite gut from North east region of India. A total of 27 culturable bacterial isolates were screened for cellulase production. Out of the 27 bacterial isolates 11 showed zone of clearance on CMC agar media on staining with 1% Congo red, suggesting potential cellulose degrading activity. The maximum hydrolysis capacities (HC value) on CMC agar plate was found within the range of 3.6 to 40mm. The morphological characterization and gram staining of the positive isolates indicated that 3 isolates were positively stained rods and others were negative cocci. All the cellulase positive isolates were also tested for carbohydrate utilization with maltose, dextrose and fructose, to which all the 11 isolates responded positively. Further, based on the amplification and sequencing of the 16S rRNA genetic region, isolates were identified as member of the genus Bacillus, Paenibacillus and Staphylococcus. The degrading potential of these bacteria were assessed by developing bacterial consortium and efficient degradation was reported after seven days of incubation with different cellulose source like rice, cotton and rice husk.

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