scholarly journals Worm-Based Microfluidic Biosensor for Real-Time Assessment of the Metastatic Status

Cancers ◽  
2021 ◽  
Vol 13 (4) ◽  
pp. 873 ◽  
Author(s):  
Jing Zhang ◽  
Song Lin Chua ◽  
Bee Luan Khoo

Background: Metastasis is a complex process that affects patient treatment and survival. To routinely monitor cancer plasticity and guide treatment strategies, it is highly desired to provide information about metastatic status in real-time. Here, we proposed a worm-based (WB) microfluidic biosensor to rapidly monitor biochemical cues related to metastasis in a well-defined environment. Compared to conventional biomarker-based methods, the WB biosensor allowed high throughput screening under low cost, requiring only visual quantification of outputs; Methods: Caenorhabditis elegans were placed in the WB biosensor and exposed to samples conditioned with cancer cell clusters. The chemotactic preference of these worms was observed under discontinuous imaging to minimize the impact on physiological activity; Results: A chemotaxis index (CI) was defined to standardize the quantitative assessment from the WB biosensor, where moderate (3.24–6.5) and high (>6.5) CI levels reflected increased metastasis risk and presence of metastasis, respectively. We demonstrated that the secreted metabolite glutamate was a chemorepellent, and larger clusters associated with increased metastatic potential also enhanced CI levels; Conclusions: Overall, this study provided a proof of concept for the WB biosensors in assessing metastasis status, with the potential to evaluate patient-derived cancer clusters for routine management.

2020 ◽  
Vol 90 (3) ◽  
pp. 30502
Author(s):  
Alessandro Fantoni ◽  
João Costa ◽  
Paulo Lourenço ◽  
Manuela Vieira

Amorphous silicon PECVD photonic integrated devices are promising candidates for low cost sensing applications. This manuscript reports a simulation analysis about the impact on the overall efficiency caused by the lithography imperfections in the deposition process. The tolerance to the fabrication defects of a photonic sensor based on surface plasmonic resonance is analysed. The simulations are performed with FDTD and BPM algorithms. The device is a plasmonic interferometer composed by an a-Si:H waveguide covered by a thin gold layer. The sensing analysis is performed by equally splitting the input light into two arms, allowing the sensor to be calibrated by its reference arm. Two different 1 × 2 power splitter configurations are presented: a directional coupler and a multimode interference splitter. The waveguide sidewall roughness is considered as the major negative effect caused by deposition imperfections. The simulation results show that plasmonic effects can be excited in the interferometric waveguide structure, allowing a sensing device with enough sensitivity to support the functioning of a bio sensor for high throughput screening. In addition, the good tolerance to the waveguide wall roughness, points out the PECVD deposition technique as reliable method for the overall sensor system to be produced in a low-cost system. The large area deposition of photonics structures, allowed by the PECVD method, can be explored to design a multiplexed system for analysis of multiple biomarkers to further increase the tolerance to fabrication defects.


Sensors ◽  
2021 ◽  
Vol 21 (14) ◽  
pp. 4637
Author(s):  
Huixin Zong ◽  
Peter Brimblecombe ◽  
Li Sun ◽  
Peng Wei ◽  
Kin-Fai Ho ◽  
...  

Sensor technology has enabled the development of portable low-cost monitoring kits that might supplement many applications in conventional monitoring stations. Despite the sensitivity of electrochemical gas sensors to environmental change, they are increasingly important in monitoring polluted microenvironments. The performance of a compact diffusion-based Personal Exposure Kit (PEK) was assessed for real-time gaseous pollutant measurement (CO, O3, and NO2) under typical environmental conditions encountered in the subtropical city of Hong Kong. A dynamic baseline tracking method and a range of calibration protocols to address system performance were explored under practical scenarios to assess the performance of the PEK in reducing the impact of rapid changes in the ambient environment in personal exposure assessment applications. The results show that the accuracy and stability of the ppb level gas measurement is enhanced even in heterogeneous environments, thus avoiding the need for data post-processing with mathematical algorithms, such as multi-linear regression. This establishes the potential for use in personal exposure monitoring, which has been difficult in the past, and for reporting more accurate and reliable data in real-time to support personal exposure assessment and portable air quality monitoring applications.


2011 ◽  
Vol 2011 ◽  
pp. 1-13 ◽  
Author(s):  
Katrin Schlie ◽  
Jaeline E. Spowart ◽  
Luke R. K. Hughson ◽  
Katelin N. Townsend ◽  
Julian J. Lum

Hypoxia is a signature feature of growing tumors. This cellular state creates an inhospitable condition that impedes the growth and function of all cells within the immediate and surrounding tumor microenvironment. To adapt to hypoxia, cells activate autophagy and undergo a metabolic shift increasing the cellular dependency on anaerobic metabolism. Autophagy upregulation in cancer cells liberates nutrients, decreases the buildup of reactive oxygen species, and aids in the clearance of misfolded proteins. Together, these features impart a survival advantage for cancer cells in the tumor microenvironment. This observation has led to intense research efforts focused on developing autophagy-modulating drugs for cancer patient treatment. However, other cells that infiltrate the tumor environment such as immune cells also encounter hypoxia likely resulting in hypoxia-induced autophagy. In light of the fact that autophagy is crucial for immune cell proliferation as well as their effector functions such as antigen presentation and T cell-mediated killing of tumor cells, anticancer treatment strategies based on autophagy modulation will need to consider the impact of autophagy on the immune system.


2021 ◽  
Author(s):  
Tomasz Hadas ◽  
Grzegorz Marut ◽  
Jan Kapłon ◽  
Witold Rohm

<p>The dynamics of water vapor distribution in the troposphere, measured with Global Navigation Satellite Systems (GNSS), is a subject of weather research and climate studies. With GNSS, remote sensing of the troposphere in Europe is performed continuously and operationally under the E-GVAP (http://egvap.dmi.dk/) program with more than 2000 permanent stations. These data are one of the assimilation system component of mesoscale weather prediction models (10 km scale) for many nations across Europe. However, advancing precise local forecasts for severe weather requires high resolution models and observing system.   Further densification of the tracking network, e.g. in urban or mountain areas, will be costly when considering geodetic-grade equipment. However, the rapid development of GNSS-based applications results in a dynamic release of mass-market GNSS receivers. It has been demonstrated that post-processing of GPS-data from a dual-frequency low-cost receiver allows retrieving ZTD with high accuracy. Although low-cost receivers are a promising solution to the problem of densifying GNSS networks for water vapor monitoring, there are still some technological limitations and they require further development and calibration.</p><p>We have developed a low-cost GNSS station, dedicated to real-time GNSS meteorology, which provides GPS, GLONASS and Galileo dual-frequency observations either in RINEX v3.04 format or via RTCM v3.3 stream, with either Ethernet or GSM data transmission. The first two units are deployed in a close vicinity of permanent station WROC, which belongs to the International GNSS Service (IGS) network. Therefore, we compare results from real-time and near real-time processing of GNSS observations from a low-cost unit with IGS Final products. We also investigate the impact of replacing a standard patch antenna with an inexpensive survey-grade antenna. Finally, we deploy a local network of low-cost receivers in and around the city of Wroclaw, Poland, in order to analyze the dynamics of troposphere delay at a very high spatial resolution.</p><p>As a measure of accuracy, we use the standard deviation of ZTD differences between estimated ZTD and IGS Final product. For the near real-time mode, that accuracy is 5 mm and 6 mm, for single- (L1) and dual-frequency (L1/L5,E5b) solution, respectively. Lower accuracy of the dual-frequency relative solution we justify by the missing antenna phase center correction model for L5 and E5b frequencies. With the real-time Precise Point Positioning technique, we estimate ZTD with the accuracy of 7.5 – 8.6 mm. After antenna replacement, the accuracy is improved almost by a factor of 2 (to 4.1 mm), which is close to the 3.1 mm accuracy which we obtain in real-time using data from the WROC station.</p>


2020 ◽  
Author(s):  
Rebecca Tanzer-Gruener ◽  
Jiayu Li ◽  
s. rose eilenberg ◽  
Allen Robinson ◽  
Albert Presto

Modifiable sources of air pollution such as traffic, cooking, and electricity generation emissions can be modulated either by changing activity levels or source intensity. Although air pollution regulations typically target reducing emission factors rather than altering activity, the COVID-19 related closures offered a novel opportunity to observe and quantify the impact of activity levels of modifiable factors on ambient air pollution in real-time. We use data from a network of twenty-seven low-cost Real-time Affordable Multi-Pollutant (RAMP) sensor packages deployed throughout urban and suburban Pittsburgh along with data from EPA regulatory monitors. The RAMP locations were divided into four site groups based on land use (High Traffic, Urban Residential, Suburban Residential, and Industrial). Concentrations of PM2.5, CO, and NO2 following the COVID-related closures at each site group were compared to measurements from “business as usual” periods in March 2019 and 2020. Overall, PM2.5 concentrations decreased across the domain by 3 μg/m3. Intra-day variabilities of the pollutants were computed to attribute pollutant enhancements to specific emission sources (i.e. traffic and industrial emissions). There was no significant change in the industrial related intra-day variability of PM2.5 at the Industrial sites following the COVID-related closures. The morning rush hour induced CO and NO2 concentrations at the High Traffic sites were reduced by 57% and 43%, respectively, which is consistent with the observed reduction in commuter traffic (~50%). The morning rush hour PM2.5 enhancement from traffic emissions fell from ~1.5 μg/m3 to ~0 μg/m3 across all site groups. This translates to a reduction of 0.125 μg/m3 in the daily average PM2.5 concentration. If PM2.5 National Ambient Air Quality Standards (NAAQS) are tightened these calculations shed light on to what extent reductions in traffic related emissions are able to aid in meeting more stringent regulations.


2020 ◽  
Author(s):  
Rebecca Tanzer-Gruener ◽  
Jiayu Li ◽  
s. rose eilenberg ◽  
Allen Robinson ◽  
Albert Presto

Modifiable sources of air pollution such as traffic, cooking, and electricity generation emissions can be modulated either by changing activity levels or source intensity. Although air pollution regulations typically target reducing emission factors rather than altering activity, the COVID-19 related closures offered a novel opportunity to observe and quantify the impact of activity levels of modifiable factors on ambient air pollution in real-time. We use data from a network of twenty-seven low-cost Real-time Affordable Multi-Pollutant (RAMP) sensor packages deployed throughout urban and suburban Pittsburgh along with data from EPA regulatory monitors. The RAMP locations were divided into four site groups based on land use (High Traffic, Urban Residential, Suburban Residential, and Industrial). Concentrations of PM2.5, CO, and NO2 following the COVID-related closures at each site group were compared to measurements from “business as usual” periods in March 2019 and 2020. Overall, PM2.5 concentrations decreased across the domain by 3 μg/m3. Intra-day variabilities of the pollutants were computed to attribute pollutant enhancements to specific emission sources (i.e. traffic and industrial emissions). There was no significant change in the industrial related intra-day variability of PM2.5 at the Industrial sites following the COVID-related closures. The morning rush hour induced CO and NO2 concentrations at the High Traffic sites were reduced by 57% and 43%, respectively, which is consistent with the observed reduction in commuter traffic (~50%). The morning rush hour PM2.5 enhancement from traffic emissions fell from ~1.5 μg/m3 to ~0 μg/m3 across all site groups. This translates to a reduction of 0.125 μg/m3 in the daily average PM2.5 concentration. If PM2.5 National Ambient Air Quality Standards (NAAQS) are tightened these calculations shed light on to what extent reductions in traffic related emissions are able to aid in meeting more stringent regulations.


2015 ◽  
Vol 6 (1) ◽  
pp. 3-22 ◽  
Author(s):  
G. Schmidtke

Abstract. In the physics of the upper atmosphere the solar extreme ultraviolet (EUV) radiation plays a dominant role controlling most of the thermospheric/ionospheric (T/I) processes. Since this part of the solar spectrum is absorbed in the thermosphere, platforms to measure the EUV fluxes became only available with the development of rockets reaching altitude levels exceeding 80 km. With the availability of V2 rockets used in space research, recording of EUV spectra started in 1946 using photographic films. The development of pointing devices to accurately orient the spectrographs toward the sun initiated intense activities in solar–terrestrial research. The application of photoelectric recording technology enabled the scientists placing EUV spectrometers aboard satellites observing qualitatively strong variability of the solar EUV irradiance on short-, medium-, and long-term scales. However, as more measurements were performed more radiometric EUV data diverged due to the inherent degradation of the EUV instruments with time. Also, continuous recording of the EUV energy input to the T/I system was not achieved. It is only at the end of the last century that there was progress made in solving the serious problem of degradation enabling to monitore solar EUV fluxes with sufficient radiometric accuracy. The data sets available allow composing the data available to the first set of EUV data covering a period of 11 years for the first time. Based on the sophisticated instrumentation verified in space, future EUV measurements of the solar spectral irradiance (SSI) are promising accuracy levels of about 5% and less. With added low-cost equipment, real-time measurements will allow providing data needed in ionospheric modeling, e.g., for correcting propagation delays of navigation signals from space to earth. Adding EUV airglow and auroral emission monitoring by airglow cameras, the impact of space weather on the terrestrial T/I system can be studied with a spectral terrestrial irradiance camera (STI-Cam) and also be used investigating real-time space weather effects and deriving more detailed correction procedures for the evaluation of Global Navigation Satellite System (GNSS) signals. Progress in physics goes with achieving higher accuracy in measurements. This review historically guides the reader on the ways of exploring the impact of the variable solar radiation in the extreme ultraviolet spectral region on our upper atmosphere in the altitude regime from 80 to 1000 km.


2018 ◽  
Vol 146 (1) ◽  
pp. 199-211 ◽  
Author(s):  
Will McCarty ◽  
Mohar Chattopadhyay ◽  
Austin Conaty

Abstract The Rapid Scatterometer (RapidScat) was built as a low-cost follow-on to the QuikSCAT mission. It flew on the International Space Station (ISS) and provided data from 3 October 2014 to 20 August 2016. These data allowed for the retrieval of surface wind vectors derived from surface roughness estimates measured from multiple coincident azimuth angles. These measurements were unique to the historical scatterometer record in that the ISS flies in a low inclination, non-sun-synchronous orbit. Scatterometry-derived wind vectors have been routinely assimilated in both forward processing and reanalysis systems run at the Global Modeling and Assimilation Office (GMAO). As the RapidScat retrievals were made available in near–real time, they were assimilated in the forward processing system, and the methods to assimilate and evaluate these retrievals are described. Time series of data statistics are presented first for the near-real-time data assimilated in GMAO forward processing. Second, the full data products provided by the RapidScat team are compared passively to the MERRA-2 reanalysis. Both sets of results show that the root-mean-square (RMS) difference of the observations and the GMAO model background fields increased over the course of the data record. Furthermore, the observations and the backgrounds are shown to be biased for both the zonal and meridional wind components. The retrievals are shown to have had a net forecast error reduction via the forecast sensitivity observation impact (FSOI) metric, which is a quantification of 24-h forecast error reduction, though the impact became neutral as the signal-to-noise ratio of the instrument decreased over its lifespan.


2014 ◽  
Vol 660 ◽  
pp. 983-987
Author(s):  
Aftab Ahmed ◽  
Khalid Hasnan ◽  
Badrul Aisham ◽  
Qadir Bakhsh

Every industry, organization or individual needs to be minimize their expenditure, time and fatigue and maximize their profit in supply chain. These goals can be achieved through automation by using Radio Frequency Identification (RFID) and Zigbee wireless communication technologies, which is easily available in the market. Basically RFID technology is used for automatically tracking, locating or identifying the entities. It can easily integrate with low cost low power consumption Xbee (Zigbee) device, which is used to increase the communication range by large number of node deployment. RFID-Xbee network integrates with Laboratory Virtual Instrument Engineering Workbench (LabVIEW) Graphical User Interface (GUI), which gives real time information of supply chain at single control panel. The integrated communication model proves the near field inductive coupling and can be used in supermarket for item pricing, office automation, security system, and car parking. This system confirms the concept of real-time locating system (RTLS) in an indoor environment. The impact of RFID and Xbee network communication model enhance the read range of RFID reader, so that out of range items can be tracked easily without additional RFID readers. The benefit of this system is to maximize profit, reduce human intervention and minimize waste.


BMC Cancer ◽  
2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Yoo Young Dominique Lee ◽  
Doan Trang Nguyen ◽  
Trevor Moodie ◽  
Ricky O’Brien ◽  
Anne McMaster ◽  
...  

Abstract Background Stereotactic Ablative Body Radiotherapy (SABR) is a non-invasive treatment which allows delivery of an ablative radiation dose with high accuracy and precision. SABR is an established treatment for both primary and secondary liver malignancies, and technological advances have improved its efficacy and safety. Respiratory motion management to reduce tumour motion and image guidance to achieve targeting accuracy are crucial elements of liver SABR. This phase II multi-institutional TROG 17.03 study, Liver Ablative Radiotherapy using Kilovoltage intrafraction monitoring (LARK), aims to investigate and assess the dosimetric impact of the KIM real-time image guidance technology. KIM utilises standard linear accelerator equipment and therefore has the potential to be a widely available real-time image guidance technology for liver SABR. Methods Forty-six patients with either hepatocellular carcinoma or oligometastatic disease to the liver suitable for and treated with SABR using Kilovoltage Intrafraction Monitoring (KIM) guidance will be included in the study. The dosimetric impact will be assessed by quantifying accumulated patient dose distribution with or without the KIM intervention. The patient treatment outcomes of local control, toxicity and quality of life will be measured. Discussion Liver SABR is a highly effective treatment, but precise dose delivery is challenging due to organ motion. Currently, there is a lack of widely available options for performing real-time tumour localisation to assist with accurate delivery of liver SABR. This study will provide an assessment of the impact of KIM as a potential solution for real-time image guidance in liver SABR. Trial registration This trial was registered on December 7th 2016 on ClinicalTrials.gov under the trial-ID NCT02984566.


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