scholarly journals Evaluation of LandscapeDNDC Model Predictions of CO2 and N2O Fluxes from an Oak Forest in SE England

Forests ◽  
2021 ◽  
Vol 12 (11) ◽  
pp. 1517
Author(s):  
Shirley M. Cade ◽  
Kevin C. Clemitshaw ◽  
Saúl Molina-Herrera ◽  
Rüdiger Grote ◽  
Edwin Haas ◽  
...  

Process-based biogeochemical models are valuable tools to evaluate impacts of environmental or management changes on the greenhouse gas (GHG) balance of forest ecosystems. We evaluated LandscapeDNDC, a process-based model developed to simulate carbon (C), nitrogen (N) and water cycling at ecosystem and regional scales, against eddy covariance and soil chamber measurements of CO2 and N2O fluxes in an 80-year-old deciduous oak forest. We compared two LandscapeDNDC vegetation modules: PSIM (Physiological Simulation Model), which includes the understorey explicitly, and PnET (Photosynthesis–Evapotranspiration Model), which does not. Species parameters for both modules were adjusted to match local measurements. LandscapeDNDC was able to reproduce daily micro-climatic conditions, which serve as input for the vegetation modules. The PSIM and PnET modules reproduced mean annual net CO2 uptake to within 1% and 15% of the measured values by balancing gains and losses in seasonal patterns with respect to measurements, although inter-annual variations were not well reproduced. The PSIM module indicated that the understorey contributed up to 21% to CO2 fluxes. Mean annual soil CO2 fluxes were underestimated by 32% using PnET and overestimated by 26% with PSIM; both modules simulated annual soil N2O fluxes within the measured range but with less interannual variation. Including stand structure information improved the model, but further improvements are required for the model to predict forest GHG balances and their inter-annual variability following climatic or management changes.

2013 ◽  
Vol 10 (11) ◽  
pp. 7035-7052 ◽  
Author(s):  
V. V. S. S. Sarma ◽  
A. Lenton ◽  
R. M. Law ◽  
N. Metzl ◽  
P. K. Patra ◽  
...  

Abstract. The Indian Ocean (44° S–30° N) plays an important role in the global carbon cycle, yet it remains one of the most poorly sampled ocean regions. Several approaches have been used to estimate net sea–air CO2 fluxes in this region: interpolated observations, ocean biogeochemical models, atmospheric and ocean inversions. As part of the RECCAP (REgional Carbon Cycle Assessment and Processes) project, we combine these different approaches to quantify and assess the magnitude and variability in Indian Ocean sea–air CO2 fluxes between 1990 and 2009. Using all of the models and inversions, the median annual mean sea–air CO2 uptake of −0.37 ± 0.06 PgC yr−1 is consistent with the −0.24 ± 0.12 PgC yr−1 calculated from observations. The fluxes from the southern Indian Ocean (18–44° S; −0.43 ± 0.07 PgC yr−1 are similar in magnitude to the annual uptake for the entire Indian Ocean. All models capture the observed pattern of fluxes in the Indian Ocean with the following exceptions: underestimation of upwelling fluxes in the northwestern region (off Oman and Somalia), overestimation in the northeastern region (Bay of Bengal) and underestimation of the CO2 sink in the subtropical convergence zone. These differences were mainly driven by lack of atmospheric CO2 data in atmospheric inversions, and poor simulation of monsoonal currents and freshwater discharge in ocean biogeochemical models. Overall, the models and inversions do capture the phase of the observed seasonality for the entire Indian Ocean but overestimate the magnitude. The predicted sea–air CO2 fluxes by ocean biogeochemical models (OBGMs) respond to seasonal variability with strong phase lags with reference to climatological CO2 flux, whereas the atmospheric inversions predicted an order of magnitude higher seasonal flux than OBGMs. The simulated interannual variability by the OBGMs is weaker than that found by atmospheric inversions. Prediction of such weak interannual variability in CO2 fluxes by atmospheric inversions was mainly caused by a lack of atmospheric data in the Indian Ocean. The OBGM models suggest a small strengthening of the sink over the period 1990–2009 of −0.01 PgC decade−1. This is inconsistent with the observations in the southwestern Indian Ocean that shows the growth rate of oceanic pCO2 was faster than the observed atmospheric CO2 growth, a finding attributed to the trend of the Southern Annular Mode (SAM) during the 1990s.


2013 ◽  
Vol 10 (7) ◽  
pp. 10759-10810
Author(s):  
V. V. S. S. Sarma ◽  
A. Lenton ◽  
R. Law ◽  
N. Metzl ◽  
P. K. Patra ◽  
...  

Abstract. The Indian Ocean (44° S–30° N) plays an important role in the global carbon cycle, yet remains one of the most poorly sampled ocean regions. Several approaches have been used to estimate net sea–air CO2 fluxes in this region: interpolated observations, ocean biogeochemical models, atmospheric and ocean inversions. As part of the RECCAP (REgional Carbon Cycle Assessment and Processes) project, we combine these different approaches to quantify and assess the magnitude and variability in Indian Ocean sea–air CO2 fluxes between 1990 and 2009. Using all of the models and inversions, the median annual mean sea–air CO2 uptake of −0.37 ± 0.06 Pg C yr–1, is consistent with the −0.24 ± 0.12 Pg C yr–1 calculated from observations. The fluxes from the Southern Indian Ocean (18° S–44° S; −0.43 ± 0.07 Pg C yr–1) are similar in magnitude to the annual uptake for the entire Indian Ocean. All models capture the observed pattern of fluxes in the Indian Ocean with the following exceptions: underestimation of upwelling fluxes in the northwestern region (off Oman and Somalia), over estimation in the northeastern region (Bay of Bengal) and underestimation of the CO2 sink in the subtropical convergence zone. These differences were mainly driven by a lack of atmospheric CO2 data in atmospheric inversions, and poor simulation of monsoonal currents and freshwater discharge in ocean biogeochemical models. Overall, the models and inversions do capture the phase of the observed seasonality for the entire Indian Ocean but over estimate the magnitude. The predicted sea–air CO2 fluxes by Ocean BioGeochemical Models (OBGM) respond to seasonal variability with strong phase lags with reference to climatological CO2 flux, whereas the atmospheric inversions predict an order of magnitude higher seasonal flux than OBGMs. The simulated interannual variability by the OBGMs is weaker than atmospheric inversions. Prediction of such weak interannual variability in CO2 fluxes by atmospheric inversions was mainly caused by lack of atmospheric data in the Indian Ocean. The OBGM models suggest a small strengthening of the sink over the period 1990–2009 of −0.01 Pg C decade–1. This is inconsistent with the observations in the southwest Indian Ocean that shows the growth rate of oceanic pCO2 was faster than the observed atmospheric CO2 growth, a finding attributed to the trend of the Southern Annual Mode (SAM) during the 1990s.


2007 ◽  
Vol 4 (6) ◽  
pp. 1005-1025 ◽  
Author(s):  
L. Kutzbach ◽  
J. Schneider ◽  
T. Sachs ◽  
M. Giebels ◽  
H. Nykänen ◽  
...  

Abstract. Closed (non-steady state) chambers are widely used for quantifying carbon dioxide (CO2) fluxes between soils or low-stature canopies and the atmosphere. It is well recognised that covering a soil or vegetation by a closed chamber inherently disturbs the natural CO2 fluxes by altering the concentration gradients between the soil, the vegetation and the overlying air. Thus, the driving factors of CO2 fluxes are not constant during the closed chamber experiment, and no linear increase or decrease of CO2 concentration over time within the chamber headspace can be expected. Nevertheless, linear regression has been applied for calculating CO2 fluxes in many recent, partly influential, studies. This approach has been justified by keeping the closure time short and assuming the concentration change over time to be in the linear range. Here, we test if the application of linear regression is really appropriate for estimating CO2 fluxes using closed chambers over short closure times and if the application of nonlinear regression is necessary. We developed a nonlinear exponential regression model from diffusion and photosynthesis theory. This exponential model was tested with four different datasets of CO2 flux measurements (total number: 1764) conducted at three peatlands sites in Finland and a tundra site in Siberia. Thorough analyses of residuals demonstrated that linear regression was frequently not appropriate for the determination of CO2 fluxes by closed-chamber methods, even if closure times were kept short. The developed exponential model was well suited for nonlinear regression of the concentration over time c(t) evolution in the chamber headspace and estimation of the initial CO2 fluxes at closure time for the majority of experiments. However, a rather large percentage of the exponential regression functions showed curvatures not consistent with the theoretical model which is considered to be caused by violations of the underlying model assumptions. Especially the effects of turbulence and pressure disturbances by the chamber deployment are suspected to have caused unexplainable curvatures. CO2 flux estimates by linear regression can be as low as 40% of the flux estimates of exponential regression for closure times of only two minutes. The degree of underestimation increased with increasing CO2 flux strength and was dependent on soil and vegetation conditions which can disturb not only the quantitative but also the qualitative evaluation of CO2 flux dynamics. The underestimation effect by linear regression was observed to be different for CO2 uptake and release situations which can lead to stronger bias in the daily, seasonal and annual CO2 balances than in the individual fluxes. To avoid serious bias of CO2 flux estimates based on closed chamber experiments, we suggest further tests using published datasets and recommend the use of nonlinear regression models for future closed chamber studies.


Author(s):  
Cássia B. Machado ◽  
José R. de S. Lima ◽  
Antonio C. D. Antonino ◽  
Eduardo S. de Souza ◽  
Rodolfo M. S. Souza ◽  
...  

ABSTRACT Studies that investigate the relationships between CO2 fluxes and evapotranspiration (ET) are important for predicting how agricultural ecosystems will respond to climate changes. However, none was made on the maize-grass intercropping system in Brazil. The aim of this study was to determine the ET and CO2 fluxes in a signal grass pasture intercropped with maize, in São João, Pernambuco, Brazil, in a drought year. Furthermore, the soil water storage (SWS) and leaf area index (LAI) were determined. The latent heat flux was the main consumer of the available energy and the daily and seasonal ET and CO2 variations were mainly controlled by rainfall, through the changes in soil water content and consequently in SWS. The agroecosystem acted as an atmospheric carbon source, during drier periods and lower LAI, and as an atmospheric carbon sink, during wetter periods and higher LAI values. In a dry year, the intercropping sequestered 2.9 t C ha-1, which was equivalent to 8.0 kg C ha-1 d-1. This study showed strong seasonal fluctuations in maize-grass intercropping CO2 fluxes, due to seasonality of rainfall, and that this agroecosystem is vulnerable to low SWS, with significant reduction in CO2 uptake during these periods.


2021 ◽  
Author(s):  
Mathias Neumann ◽  
Hubert Hasenauer

Abstract Competition for resources (light, water, nutrients, etc.) limits the size and abundance of alive trees a site can support. This carrying capacity determines the potential carbon sequestration in alive trees as well as the maximum growing stock. Lower stocking through thinning can change growth and mortality. We were interested in the relations between stand structure, increment and mortality using a long-unmanaged oak-hornbeam forest near Vienna, Austria, as case study. We expected lower increment for heavy thinned compared to unmanaged stands. We tested the thinning response using three permanent growth plots, whereas two were thinned (50% and 70% basal area removed) and one remained unmanaged. We calculated stand structure (basal area, stem density, diameter distribution) and increment and mortality of single trees. The heavy thinned stand had over ten years similar increment as the moderate thinned and unthinned stands. Basal area of the unthinned stand remained constant and stem density decreased due to competition-related mortality. The studied oak-hornbeam stands responded well even to late and heavy thinning suggesting a broad “plateau” of stocking and increment for these forest types. Lower stem density for thinned stands lead to much larger tree increment of single trees, compared to the unthinned reference. The findings of this study need verification for other soil and climatic conditions.


2021 ◽  
Vol 42 ◽  
pp. e70549
Author(s):  
Jordi Bou ◽  
Lluís Vilar

The sessile oak forests found on the northeast of the Iberian Peninsula are ascribed to the Lathyro-Quercetumpetraeae association and play a key role in understanding the ecology of this habitat, as this region represents its xeric limit. For this reason, we analysed the biodiversity patterns and current conservation status of the sessile oak forests in the region. To do so, we collected Braun-Blanquet inventories of 34 plots randomly distributed throughout the sessile oak forests. The results showed a relationship between the climatic conditions and the biodiversity variables. While the richness of the community increased with decreasing temperatures, the characteristic species found within the community decreased at these same temperatures. This result was due to the presence of most companion species in the cool zones at high elevations.Sessile oaks are found close to other communities, such as silver birches and Scot pine forests.On the other hand, in the warm areas at low elevations, the sessile oak community was more established, with plants typical of this type of forest. These slightly warmer zones with sessile oaks are very important in terms of conservation and more vulnerable to climate change and the thermophilization of the community, as has been studied. As such, protecting and managing these forests is key to conserving this community. Nevertheless, as current protection measures do not safeguard most of these forests, it is essential to define a conservation strategy to preserve them. Using the conservation status, we have established criteria to improve the conservation strategy for sessile oak forest on the NE Iberian Peninsula.


2020 ◽  
Vol 47 (1) ◽  
pp. 1-9
Author(s):  
Milan Barna ◽  
Angel Ferezliev ◽  
Hristo Tsakov ◽  
Ivan Mihál

AbstractWe investigated the current health condition (defoliation), state of natural regeneration, and mycoflora and phytopathogen-caused attacks in Scots pine forests (Pinus sylvestris L.) planted in the 1960s in areas affected by wind disturbances in the West Rhodope Mountains in Bulgaria. Some damage types (resin outflow and anthropogenic damage) were present to a low extent in the research plots (S – Selishte and PK – Pobit Kamak). Some were missing completely (damage by deer and other animals, the presence of lignicolous fungi and abiotic damage). The most important results of this study were the following: i) the occurrence of the bark beetle pest Tomicus minor Hartig (Coleoptera, Scolytinae) was recorded on average in 4.6 (S) and 2.3 (PK) of fallen shoots under the tree crown within 1 m diameter around the stem; ii) significant damage to tree crowns due to the loss of assimilation organs in Scots pine trees (28% – S and 39% – PK, respectively) was several times higher than that recorded in Norway spruce (Picea abies L.) (10%); iii) tree species composition resulting from natural regeneration showed 95–100% proportion of Norway spruce despite the predominance of Scots pine in the maternal stand. These observations might provide evidence of unsuitable environmental conditions in the studied localities for pine forests on the southern range of the natural P. sylvestris occurrence. Forest management in similar ecological and climatic conditions should aim at significant diversification of the forest stand structure by utilizing tree species suitable for the given ecosystems.


2020 ◽  
Author(s):  
Mercedes Ibañez ◽  
Núria Altimir ◽  
Àngela Ribas ◽  
Werner Eugster ◽  
Maria-Teresa Sebastià

Abstract. Forage systems are the major land use, and provide essential resources for animal feeding. Assessing the influence of forage species on net ecosystem CO2 exchange (NEE) is key to develop management strategies that can help to mitigate climate change, while optimizing productivity of these systems. However, little is known about the effect of forage species on CO2 exchange fluxes and net biome production (NBP), considering: species ecophysiological responses; growth and fallow periods separately; and the management associated with the particular sown species. Our study assesses the influence of cereal monocultures vs. cereal legume mixtures on (1) ecosystem scale CO2 fluxes, for the whole crop season and separately for the two periods of growth and fallow; (2) potential sensitivities of CO2 exchange related to short-term variations in light, temperature and soil water content; and (3) NBP during the growth period; this being the first long term (seven years) ecosystem scale CO2 fluxes dataset of an intensively managed forage system in the Pyrenees region. Our results provide strong evidence that cereal-legume mixtures lead to higher net CO2 uptake than cereal monocultures, as a result of higher gross CO2 uptake, while respiratory fluxes did not significantly increase. Also, management associated with cereal legume mixtures favoured vegetation voluntary regrowth during the fallow period, which was decisive for the cumulative net CO2 uptake of the entire crop season. All cereal legume mixtures and some cereal monocultures had a negative NBP (net gain of C) during the growth period, indicating C input to the system, besides the yield. Overall, cereal legume mixtures enhanced net CO2 sink capacity of the forage system, while ensuring productivity and forage quality.


2013 ◽  
Vol 10 (3) ◽  
pp. 2145-2158 ◽  
Author(s):  
J. G. Barr ◽  
V. Engel ◽  
J. D. Fuentes ◽  
D. O. Fuller ◽  
H. Kwon

Abstract. Despite the importance of mangrove ecosystems in the global carbon budget, the relationships between environmental drivers and carbon dynamics in these forests remain poorly understood. This limited understanding is partly a result of the challenges associated with in situ flux studies. Tower-based CO2 eddy covariance (EC) systems are installed in only a few mangrove forests worldwide, and the longest EC record from the Florida Everglades contains less than 9 years of observations. A primary goal of the present study was to develop a methodology to estimate canopy-scale photosynthetic light use efficiency in this forest. These tower-based observations represent a basis for associating CO2 fluxes with canopy light use properties, and thus provide the means for utilizing satellite-based reflectance data for larger scale investigations. We present a model for mangrove canopy light use efficiency utilizing the enhanced green vegetation index (EVI) derived from the Moderate Resolution Imaging Spectroradiometer (MODIS) that is capable of predicting changes in mangrove forest CO2 fluxes caused by a hurricane disturbance and changes in regional environmental conditions, including temperature and salinity. Model parameters are solved for in a Bayesian framework. The model structure requires estimates of ecosystem respiration (RE), and we present the first ever tower-based estimates of mangrove forest RE derived from nighttime CO2 fluxes. Our investigation is also the first to show the effects of salinity on mangrove forest CO2 uptake, which declines 5% per each 10 parts per thousand (ppt) increase in salinity. Light use efficiency in this forest declines with increasing daily photosynthetic active radiation, which is an important departure from the assumption of constant light use efficiency typically applied in satellite-driven models. The model developed here provides a framework for estimating CO2 uptake by these forests from reflectance data and information about environmental conditions.


mSystems ◽  
2019 ◽  
Vol 4 (6) ◽  
Author(s):  
Adrienne B. Narrowe ◽  
Mikayla A. Borton ◽  
David W. Hoyt ◽  
Garrett J. Smith ◽  
Rebecca A. Daly ◽  
...  

ABSTRACT Wetland soils are one of the largest natural contributors to the emission of methane, a potent greenhouse gas. Currently, microbial contributions to methane emissions from these systems emphasize the roles of acetoclastic and hydrogenotrophic methanogens, while less frequently considering methyl-group substrates (e.g., methanol and methylamines). Here, we integrated laboratory and field experiments to explore the potential for methylotrophic methanogenesis in Old Woman Creek (OWC), a temperate freshwater wetland located in Ohio, USA. We first demonstrated the capacity for methylotrophic methanogenesis in these soils using laboratory soil microcosms amended with trimethylamine. However, subsequent field porewater nuclear magnetic resonance (NMR) analyses to identify methanogenic substrates failed to detect evidence for methylamine compounds in soil porewaters, instead noting the presence of the methylotrophic substrate methanol. Accordingly, our wetland soil-derived metatranscriptomic data indicated that methanol utilization by the Methanomassiliicoccaceae was the likely source of methylotrophic methanogenesis. Methanomassiliicoccaceae relative contributions to mcrA transcripts nearly doubled with depth, accounting for up to 8% of the mcrA transcripts in 25-cm-deep soils. Longitudinal 16S rRNA amplicon and mcrA gene surveys demonstrated that Methanomassiliicoccaceae were stably present over 2 years across lateral and depth gradients in this wetland. Meta-analysis of 16S rRNA sequences similar (>99%) to OWC Methanomassiliicoccaceae in public databases revealed a global distribution, with a high representation in terrestrial soils and sediments. Together, our results demonstrate that methylotrophic methanogenesis likely contributes to methane flux from climatically relevant wetland soils. IMPORTANCE Understanding the sources and controls on microbial methane production from wetland soils is critical to global methane emission predictions, particularly in light of changing climatic conditions. Current biogeochemical models of methanogenesis consider only acetoclastic and hydrogenotrophic sources and exclude methylotrophic methanogenesis, potentially underestimating microbial contributions to methane flux. Our multi-omic results demonstrated that methylotrophic methanogens of the family Methanomassiliicoccaceae were present and active in a freshwater wetland, with metatranscripts indicating that methanol, not methylamines, was the likely substrate under the conditions measured here. However, laboratory experiments indicated the potential for other methanogens to become enriched in response to trimethylamine, revealing the reservoir of methylotrophic methanogenesis potential residing in these soils. Collectively, our approach used coupled field and laboratory investigations to illuminate metabolisms influencing the terrestrial microbial methane cycle, thereby offering direction for increased realism in predictive process-oriented models of methane flux in wetland soils.


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