scholarly journals Transcriptome Analysis of the Fruit of Two Strawberry Cultivars “Sunnyberry” and “Kingsberry” That Show Different Susceptibility to Botrytis cinerea after Harvest

2021 ◽  
Vol 22 (4) ◽  
pp. 1518
Author(s):  
Kyuweon Lee ◽  
Jeong Gu Lee ◽  
Kyeonglim Min ◽  
Jeong Hee Choi ◽  
Sooyeon Lim ◽  
...  
Keyword(s):  
Gene Expression ◽  
Botrytis Cinerea ◽  
Transcriptome Analysis ◽  
Defense Responses ◽  
Relative Difference ◽  
Gray Mold ◽  
Response Patterns ◽  
Pathogenesis Related ◽  
Related Proteins ◽  
Strawberry Cultivars

Gray mold (Botrytis cinerea) is a fungal plant pathogen causing postharvest decay in strawberry fruit. Here, we conducted a comparative transcriptome analysis to identify differences in gene expression between the immature-green (IG) and mature-red (MR) stages of the “Sunnyberry” (gray mold-resistant) and “Kingsberry” (gray mold susceptible) strawberry cultivars. Most of the genes involved in lignin and alkane-type wax biosynthesis were relatively upregulated in “Sunnyberry”. However, pathogenesis-related proteins encoding R- and antioxidant-related genes were comparatively upregulated in “Kingsberry”. Analysis of gene expression and physiological traits in the presence and absence of B. cinerea inoculation revealed that the defense response patterns significantly differed between IG and MR rather than the cultivars. “Kingsberry” showed higher antioxidant induction at IG and upregulated hemicellulose-strengthening and R genes at MR. Hence, “Sunnyberry” and “Kingsberry” differed mainly in terms of the expression levels of the genes forming cuticle, wax, and lignin and controlling the defense responses. These discrepancies might explain the relative difference between these strawberry cultivars in terms of their postharvest responses to B. cinerea.

scholarly journals The Sesquiterpene Botrydial Produced by Botrytis cinerea Induces the Hypersensitive Response on Plant Tissues and Its Action Is Modulated by Salicylic Acid and Jasmonic Acid Signaling

2011 ◽  
Vol 24 (8) ◽  
pp. 888-896 ◽  
Author(s):  
Franco Rubén Rossi ◽  
Andrés Gárriz ◽  
María Marina ◽  
Fernando Matías Romero ◽  
María Elisa Gonzalez ◽  
...  
Keyword(s):  
Salicylic Acid ◽  
Jasmonic Acid ◽  
Botrytis Cinerea ◽  
Hypersensitive Response ◽  
Defense Responses ◽  
Callose Deposition ◽  
Pathogenesis Related ◽  
Host Signaling ◽  
Related Proteins ◽  
Ja Signaling

Botrytis cinerea, as a necrotrophic fungus, kills host tissues and feeds on the remains. This fungus is able to induce the hypersensitive response (HR) on its hosts, thus taking advantage on the host's defense machinery for generating necrotic tissues. However, the identity of HR effectors produced by B. cinerea is not clear. The aim of this work was to determine whether botrydial, a phytotoxic sesquiterpene produced by B. cinerea, is able to induce the HR on plant hosts, using Arabidopsis thaliana as a model. Botrydial induced the expression of the HR marker HSR3, callose deposition, and the accumulation of reactive oxygen species and phenolic compounds. Botrydial also induced the expression of PR1 and PDF1.2, two pathogenesis-related proteins involved in defense responses regulated by salicylic acid (SA) and jasmonic acid (JA), respectively. A. thaliana and tobacco plants defective in SA signaling were more resistant to botrydial than wild-type plants, as opposed to A. thaliana plants defective in JA signaling, which were more sensitive. It can be concluded that botrydial induces the HR on its hosts and its effects are modulated by host signaling pathways mediated by SA and JA.

scholarly journals A Faster and a Stronger Defense Response: One of the Key Elements in Grapevine Explaining Its Lower Level of Susceptibility to Esca?

2013 ◽  
Vol 103 (10) ◽  
pp. 1028-1034 ◽  
Author(s):  
Carole Lambert ◽  
Ian Li Kim Khiook ◽  
Sylvia Lucas ◽  
Nadège Télef-Micouleau ◽  
Jean-Michel Mérillon ◽  
...  
Keyword(s):  
Defense Response ◽  
Defense Mechanisms ◽  
Defense Responses ◽  
Cabernet Sauvignon ◽  
Susceptible Cultivar ◽  
Pathogenesis Related ◽  
Leaf Level ◽  
Plant Pathogen Interaction ◽  
Related Proteins ◽  
Stilbene Compounds

Wood diseases like Esca are among the most damaging afflictions in grapevine. The defense mechanisms in this plant–pathogen interaction are not well understood. As some grapevine cultivars have been observed to be less susceptible to Esca than others, understanding the factors involved in this potentially stronger defense response can be of great interest. To lift part of this veil, we elicited Vitis vinifera plants of two cultivars less susceptible to Esca (‘Merlot’ and ‘Carignan’) and of one susceptible cultivar (‘Cabernet Sauvignon’), and monitored their defense responses at the leaf level. Our model of elicitation consisted in grapevine cuttings absorbing a culture filtrate of one causal agent of Esca, Phaemoniella chlamydospora. This model might reflect the early events occurring in Esca-affected grapevines. The two least susceptible cultivars showed an earlier and stronger defense response than the susceptible one, particularly with regard to induction of the PAL and STS genes, and a higher accumulation of stilbene compounds and some pathogenesis-related proteins.

scholarly journals Patterns of Gene Expression Upon Infection of Soybean Plants by Phytophthora sojae

2004 ◽  
Vol 17 (10) ◽  
pp. 1051-1062 ◽  
Author(s):  
Pat Moy ◽  
Dinah Qutob ◽  
B. Patrick Chapman ◽  
Ian Atkinson ◽  
Mark Gijzen
Keyword(s):  
Gene Expression ◽  
Time Course ◽  
Phytophthora Sojae ◽  
Gene Microarray ◽  
Pathogenesis Related ◽  
Soybean Plants ◽  
Related Proteins ◽  
Phytoalexin Biosynthesis ◽  
Host Tissues ◽  
Mixed Samples

To investigate patterns of gene expression in soybean (Glycine max) and Phytophthora sojae during an infection time course, we constructed a 4,896-gene microarray of host and pathogen cDNA transcripts. Analysis of rRNA from soybean and P. sojae was used to estimate the ratio of host and pathogen RNA present in mixed samples. Large changes in this ratio occurred between 12 and 24 h after infection, reflecting the rapid growth and proliferation of the pathogen within host tissues. From the microarray analysis, soybean genes that were identified as strongly upregulated during infection included those encoding enzymes of phytoalexin biosynthesis and defense and pathogenesis-related proteins. Expression of these genes generally peaked at 24 h after infection. Selected lipoxygenases and peroxidases were among the most strongly downregulated soybean genes during the course of infection. The number of pathogen genes expressed during infection reached a maximum at 24 h. The results show that it is possible to use a single microarray to simultaneously probe gene expression in two interacting organisms. The patterns of gene expression we observed in soybean and P. sojae support the hypothesis that the pathogen transits from biotrophy to necrotrophy between 12 and 24 h after infection.

scholarly journals Molecular Insights into Defense Responses of Vietnamese Maize Varieties to Fusarium verticillioides Isolates

2021 ◽  
Vol 7 (9) ◽  
pp. 724
Author(s):  
Trang Minh Tran ◽  
Maarten Ameye ◽  
Sofie Landschoot ◽  
Frank Devlieghere ◽  
Sarah De Saeger ◽  
...  
Keyword(s):  
Expression Profiles ◽  
Fusarium Verticillioides ◽  
Gene Expression Profiles ◽  
Defense Responses ◽  
Ear Rot ◽  
In Planta ◽  
Resistant Lines ◽  
Maize Varieties ◽  
Pathogenesis Related ◽  
Related Proteins

Fusarium ear rot (FER) caused by Fusarium verticillioides is one of the main fungal diseases in maize worldwide. To develop a pathogen-tailored FER resistant maize line for local implementation, insights into the virulence variability of a residing F. verticillioides population are crucial for developing customized maize varieties, but remain unexplored. Moreover, little information is currently available on the involvement of the archetypal defense pathways in the F. verticillioides–maize interaction using local isolates and germplasm, respectively. Therefore, this study aims to fill these knowledge gaps. We used a collection of 12 F. verticillioides isolates randomly gathered from diseased maize fields in the Vietnamese central highlands. To assess the plant’s defense responses against the pathogens, two of the most important maize hybrid genotypes grown in this agro-ecological zone, lines CP888 and Bt/GT NK7328, were used. Based on two assays, a germination and an in-planta assay, we found that line CP888 was more susceptible to the F. verticillioides isolates when compared to line Bt/GT NK7328. Using the most aggressive isolate, we monitored disease severity and gene expression profiles related to biosynthesis pathways of salicylic acid (SA), jasmonic acid (JA), abscisic acid (ABA), benzoxazinoids (BXs), and pathogenesis-related proteins (PRs). As a result, a stronger induction of SA, JA, ABA, BXs, and PRs synthesizing genes might be linked to the higher resistance of line Bt/GT NK7328 compared to the susceptible line CP888. All these findings could supply valuable knowledge in the selection of suitable FER resistant lines against the local F. verticllioides population and in the development of new FER resistant germplasms.

scholarly journals Priming of Defense Systems and Upregulation of MYC2 and JAZ1 Genes after Botrytis cinerea Inoculation in Methyl Jasmonate-Treated Strawberry Fruits

Plants ◽  
2020 ◽  
Vol 9 (4) ◽  
pp. 447 ◽  
Author(s):  
Felipe Valenzuela-Riffo ◽  
Paz E. Zúñiga ◽  
Luis Morales-Quintana ◽  
Mauricio Lolas ◽  
Marcela Cáceres ◽  
...  
Keyword(s):  
Methyl Jasmonate ◽  
Botrytis Cinerea ◽  
Defense Responses ◽  
Gray Mold ◽  
The Past ◽  
Defense Systems ◽  
Meja Treatment ◽  
Fruit Development And Ripening ◽  
Genes Encoding ◽  
And Control

Several attempts have been made to study the effects of methyl jasmonate (MeJA) on plants in the past years. However, the comparative effects of the number and phenological time of MeJA applications on the activation of defense systems is currently unknown in strawberries. In the present research, we performed three field treatments during strawberry (Fragaria × ananassa ‘Camarosa’) fruit development and ripening which consisted of differential MeJA applications at flowering (M3), and the large green (M2 and M3) and red ripe (M1, M2, and M3) fruit stages. We also checked changes in gene expression related to plant defense against Botrytis cinerea inoculation post-harvest. In M3 treatment, we observed an upregulation of the anthocyanin and lignin contents and the defense-related genes, encoding for chitinases, β-1,3-glucanases and polygalacturonase-inhibiting proteins, after harvest (0 hpi), along with the jasmonate signaling-related genes FaMYC2 and FaJAZ1 at 48 h after B. cinerea inoculation (48 hpi) during postharvest storage. Although we did not find differences in gray mold incidence between the MeJA treatments and control, these results suggest that preharvest MeJA treatment from the flowering stage onwards (M3) primes defense responses mediated by the upregulation of different defense-related genes and retains the upregulation of MYC2 and JAZ1 at 48 hpi.

scholarly journals Hop stunt viroid: Effect on Host (Humulus lupulus) Transcriptome and Its Interactions With Hop Powdery Mildew (Podospheara macularis)

2017 ◽  
Vol 30 (10) ◽  
pp. 842-851 ◽  
Author(s):  
Madhu Kappagantu ◽  
Jeff M. Bullock ◽  
Mark E. Nelson ◽  
Kenneth C. Eastwell
Keyword(s):  
Powdery Mildew ◽  
Transcriptome Analysis ◽  
Plant Pathogens ◽  
Polymerase Chain Reaction Analysis ◽  
Defense Responses ◽  
Pr Genes ◽  
Stunt Viroid ◽  
Hop Stunt Viroid ◽  
Pathogenesis Related ◽  
Host Metabolism

Viroids are the smallest known plant pathogens that exploit host systems for their replication and cause diseases in many hosts. In this study, the host response of hop plants to Hop stunt viroid (HSVd) infection was studied through transcriptome analysis. RNA sequence analysis of hop leaves infected with HSVd revealed dynamic changes in hop gene expression. Defense-related genes and genes involved in lipid and terpenoid metabolism are the major categories that showed differential expression due to HSVd infection. Additionally, the effect of HSVd on development of hop powdery mildew (Podospheara macularis) (HPM) was studied. Transcriptome analysis followed by quantitative reverse transcription-polymerase chain reaction analysis showed that transcript levels of pathogenesis-related (PR) genes such as PR protein 1, chitinase, and thaumatin-like protein genes are induced in leaves infected with HPM alone. The response in these genes to HPM is significantly down-regulated in leaves with HSVd-HPM mixed infection. These results confirm that HSVd alters host metabolism, physiology, and plant defense responses. Nevertheless, in detached leaf assays, HPM consistently expanded faster on HSVd-negative leaves relative to HSVd-positive leaves. Although HSVd infection suppresses elements associated with the host immunity response, infection by HSVd is antagonistic to HPM infection of hops.

Defense responses in tomato landrace and wild genotypes to early blight pathogenAlternaria solaniinfection and accumulation of pathogenesis-related proteins

2011 ◽  
Vol 44 (12) ◽  
pp. 1147-1164 ◽  
Author(s):  
Abida Puthenpeedikal Salim ◽  
Krishnaveni Saminaidu ◽  
Murugan Marimuthu ◽  
Yasodha Perumal ◽  
Velazhahan Rethinasamy ◽  
...  
Keyword(s):  
Early Blight ◽  
Defense Responses ◽  
Pathogenesis Related Proteins ◽  
Pathogenesis Related ◽  
Related Proteins ◽  
Tomato Landrace

scholarly journals Transcriptome Profiling of Botrytis cinerea Conidial Germination Reveals Upregulation of Infection-Related Genes during the Prepenetration Stage

2013 ◽  
Vol 12 (4) ◽  
pp. 614-626 ◽  
Author(s):  
Michaela Leroch ◽  
Astrid Kleber ◽  
Evelyn Silva ◽  
Tina Coenen ◽  
Dieter Koppenhöfer ◽  
...  
Keyword(s):  
Gene Expression ◽  
Botrytis Cinerea ◽  
Transcriptome Profiling ◽  
Gray Mold ◽  
Secretory Proteins ◽  
Global Changes ◽  
Lytic Enzymes ◽  
Chitin Deacetylase ◽  
Specific Expression ◽  
Content Type

ABSTRACTBotrytis cinereacauses gray mold on a great number of host plants. Infection is initiated by airborne conidia that invade the host tissue, often by penetration of intact epidermal cells. To mimic the surface properties of natural plant surfaces, conidia were incubated on apple wax-coated surfaces, resulting in rapid germination and appressorium formation. Global changes in gene expression were analyzed by microarray hybridization between conidia incubated for 0 h (dormant), 1 h (pregermination), 2.5 h (postgermination), 4 h (appressoria), and 15 h (early mycelium). Considerable changes were observed, in particular between 0 h and 1 h. Genes induced during germination were enriched in those genes encoding secreted proteins, including lytic enzymes. Comparison of wild-type and a nonpathogenic MAP kinase mutant (bmp1) revealed marked differences in germination-related gene expression, in particular related to secretory proteins. Using promoter-GFP reporter strains, we detected a strictly germination-specific expression pattern of a putative chitin deacetylase gene (cda1). In contrast, a cutinase gene (cutB) was found to be expressed only in the presence of plant lipids, in a developmentally less stringent pattern. We also identified a coregulated gene cluster possibly involved in secondary metabolite synthesis which was found to be controlled by a transcription factor also encoded in this cluster. Our data demonstrate that early conidial development inB. cinereais accompanied by rapid shifts in gene expression that prepare the fungus for germ tube outgrowth and host cell invasion.

scholarly journals Induce the plant resistance to pathogen infection

2014 ◽  
Vol 20 (1-2) ◽  
Author(s):  
A. Ezzat ◽  
Z. Szabó ◽  
J. Nyéki
Keyword(s):  
Gene Expression ◽  
Salicylic Acid ◽  
Systemic Acquired Resistance ◽  
Induced Defense ◽  
Acquired Resistance ◽  
Vital Role ◽  
Signal Molecule ◽  
Pathogenesis Related ◽  
Related Proteins ◽  
Direct Toxicity

Systemic acquired resistance (SAR) is a mechanism of induced defense that confers long-lasting protection against a broad spectrum of microorganisms. Salicylic acid (SA) is the signal molecule which is required for induce SAR and is associated with accumulation of pathogenesis-related proteins, which are thought to contribute to resistance. SA paly vital role in some related resistance gene expression in plant cell which have direct or indirect effect on pathogen growth as SA has direct toxicity for pathogen and in the same time has stimulation effect for some enzyme related to reduce the oxidative burst.

scholarly journals Gene Expression Analysis of Induced Plum Pox Virus Resistance in Peach (Prunus Persica) by Almond (P. Dulcis) Grafting

2021 ◽  
Author(s):  
Manuel Rubio ◽  
Pedro Martínez-García ◽  
Nikbakht-Dehkordi Azam ◽  
Angela Prudencio ◽  
Eva Gómez ◽  
...  
Keyword(s):  
Gene Expression ◽  
Transcription Initiation ◽  
Prunus Persica ◽  
Initiation Factor ◽  
Induced Response ◽  
Plum Pox Virus ◽  
Sources Of Resistance ◽  
Transcription Initiation Factor ◽  
Pathogenesis Related ◽  
Related Proteins

Abstract No natural sources of resistance to Plum pox virus (PPV, sharka disease) have been identified in peach. However, previous studies have demonstrated that grafting ‘Garrigues’ almond onto ‘GF305’ peach seedlings heavily infected with PPV can progressively reduce disease symptoms and virus accumulation. Furthermore, grafting ‘Garrigues’ onto ‘GF305’ has completely prevented virus infection. This study aims to analyse the rewiring of gene expression associated with this resistance to PPV transmitted by grafting through phloem using RNA-Seq and RTqPCR analysis. A total of 18 candidate genes were differentially expressed after grafting ‘Garrigues’ almond onto healthy ‘GF305’ peach. Among the up-regulated genes, a HEN1 homolog stands out, which, together with the differential expression of RDR- and DCL2-homologs in some of the conditions assayed, suggests that the RNA silencing machinery is activated by PPV infection and can contribute to the resistance induced by ‘Garrigues’ almond. Glucan endo -1,3-Beta D-Glucosidase could be also relevant for the ‘Garrigues’-induced response, since its expression is much higher in ‘Garrigues’ than in ‘GF305’. We also discuss the potential relevance of the following in PPV infection and ‘Garrigues’-induced resistance: several pathogenesis-related proteins, No apical meristem proteins, the transcription initiation factor TFIIB, the Speckle-type POZ protein and a number of proteins involved in phytohormone signalling.

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