scholarly journals Molecular Evolution of Calcium Signaling and Transport in Plant Adaptation to Abiotic Stress

2021 ◽  
Vol 22 (22) ◽  
pp. 12308
Author(s):  
Tao Tong ◽  
Qi Li ◽  
Wei Jiang ◽  
Guang Chen ◽  
Dawei Xue ◽  
...  
Keyword(s):  
Abiotic Stress ◽  
Calcium Signaling ◽  
Stress Responses ◽  
Evolutionary Biology ◽  
Regulatory Networks ◽  
Cascade Reactions ◽  
Future Research ◽  
Spatiotemporal Pattern ◽  
Green Plants ◽  
Signaling Components

Adaptation to unfavorable abiotic stresses is one of the key processes in the evolution of plants. Calcium (Ca2+) signaling is characterized by the spatiotemporal pattern of Ca2+ distribution and the activities of multi-domain proteins in integrating environmental stimuli and cellular responses, which are crucial early events in abiotic stress responses in plants. However, a comprehensive summary and explanation for evolutionary and functional synergies in Ca2+ signaling remains elusive in green plants. We review mechanisms of Ca2+ membrane transporters and intracellular Ca2+ sensors with evolutionary imprinting and structural clues. These may provide molecular and bioinformatics insights for the functional analysis of some non-model species in the evolutionarily important green plant lineages. We summarize the chronological order, spatial location, and characteristics of Ca2+ functional proteins. Furthermore, we highlight the integral functions of calcium-signaling components in various nodes of the Ca2+ signaling pathway through conserved or variant evolutionary processes. These ultimately bridge the Ca2+ cascade reactions into regulatory networks, particularly in the hormonal signaling pathways. In summary, this review provides new perspectives towards a better understanding of the evolution, interaction and integration of Ca2+ signaling components in green plants, which is likely to benefit future research in agriculture, evolutionary biology, ecology and the environment.

‘Omics’ analyses of regulatory networks in plant abiotic stress responses

2010 ◽  
Vol 13 (2) ◽  
pp. 132-138 ◽  
Author(s):  
Kaoru Urano ◽  
Yukio Kurihara ◽  
Motoaki Seki ◽  
Kazuo Shinozaki
Keyword(s):  
Abiotic Stress ◽  
Stress Responses ◽  
Regulatory Networks ◽  
Plant Abiotic Stress

scholarly journals The Biological Significance and Regulatory Mechanism of c-Myc Binding Protein 1 (MBP-1)

2018 ◽  
Vol 19 (12) ◽  
pp. 3868 ◽  
Author(s):  
Zijin Liu ◽  
Aileen Zhang ◽  
Lamei Zheng ◽  
Abou-Fadel Johnathan ◽  
Jun Zhang ◽  
...  
Keyword(s):  
Abiotic Stress ◽  
Stress Responses ◽  
Crop Yields ◽  
Current Knowledge ◽  
Binding Protein ◽  
Biological Significance ◽  
Future Research ◽  
Cervical Cancer Cells ◽  
Integral Role ◽  
Environmental Responses

Alternatively translated from the ENO gene and expressed in an array of vertebrate and plant tissues, c-Myc binding protein 1 (MBP-1) participates in the regulation of growth in organisms, their development and their environmental responses. As a transcriptional repressor of multiple proto-oncogenes, vertebrate MBP-1 interacts with other cellular factors to attenuate the proliferation and metastasis of lung, breast, esophageal, gastric, bone, prostrate, colorectal, and cervical cancer cells. Due to its tumor-suppressive property, MBP-1 and its downstream targets have been investigated as potential prognostic markers and therapeutic targets for various cancers. In plants, MBP-1 plays an integral role in regulating growth and development, fertility and abiotic stress responses. A better understanding of the functions and regulatory factors of MBP-1 in plants may advance current efforts to maximize plant resistance against drought, high salinity, low temperature, and oxidative stress, thus optimizing land use and crop yields. In this review article, we summarize the research advances in biological functions and mechanistic pathways underlying MBP-1, describe our current knowledge of the ENO product and propose future research directions on vertebrate health as well as plant growth, development and abiotic stress responses.

scholarly journals Transcription factors involved in abiotic stress responses in Maize (Zea mays L.) and their roles in enhanced productivity in the post genomics era

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7211 ◽  
Author(s):  
Roy Njoroge Kimotho ◽  
Elamin Hafiz Baillo ◽  
Zhengbin Zhang
Keyword(s):  
Zea Mays ◽  
Transcription Factors ◽  
Abiotic Stress ◽  
Stress Responses ◽  
Abiotic Stresses ◽  
Regulatory Networks ◽  
Target Genes ◽  
High Efficiency ◽  
Animal Feed ◽  
Direct Consequence

Background Maize (Zea mays L.) is a principal cereal crop cultivated worldwide for human food, animal feed, and more recently as a source of biofuel. However, as a direct consequence of water insufficiency and climate change, frequent occurrences of both biotic and abiotic stresses have been reported in various regions around the world, and recently, this has become a constant threat in increasing global maize yields. Plants respond to abiotic stresses by utilizing the activities of transcription factors (TFs), which are families of genes coding for specific TF proteins. TF target genes form a regulon that is involved in the repression/activation of genes associated with abiotic stress responses. Therefore, it is of utmost importance to have a systematic study on each TF family, the downstream target genes they regulate, and the specific TF genes involved in multiple abiotic stress responses in maize and other staple crops. Method In this review, the main TF families, the specific TF genes and their regulons that are involved in abiotic stress regulation will be briefly discussed. Great emphasis will be given on maize abiotic stress improvement throughout this review, although other examples from different plants like rice, Arabidopsis, wheat, and barley will be used. Results We have described in detail the main TF families in maize that take part in abiotic stress responses together with their regulons. Furthermore, we have also briefly described the utilization of high-efficiency technologies in the study and characterization of TFs involved in the abiotic stress regulatory networks in plants with an emphasis on increasing maize production. Examples of these technologies include next-generation sequencing, microarray analysis, machine learning, and RNA-Seq. Conclusion In conclusion, it is expected that all the information provided in this review will in time contribute to the use of TF genes in the research, breeding, and development of new abiotic stress tolerant maize cultivars.

scholarly journals Physiological and Transcriptomic Analysis Reveals Distorted Ion Homeostasis and Responses in the Freshwater Plant Spirodela polyrhiza L. under Salt Stress

Genes ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 743 ◽  
Author(s):  
Fu ◽  
Ding ◽  
Sun ◽  
Zhang
Keyword(s):  
Salt Stress ◽  
Abiotic Stress ◽  
Stress Responses ◽  
Regulatory Networks ◽  
Starch Content ◽  
Ion Homeostasis ◽  
Atp Synthesis ◽  
Light Reaction ◽  
Salt Stress Response ◽  
Spirodela Polyrhiza

Duckweeds are a family of freshwater angiosperms with morphology reduced to fronds and propagation by vegetative budding. Unlike other angiosperm plants such as Arabidopsis and rice that have physical barriers between their photosynthetic organs and soils, the photosynthetic organs of duckweeds face directly to their nutrient suppliers (waters), therefore, their responses to salinity may be distinct. In this research, we found that the duckweed Spirodela polyrhiza L. accumulated high content of sodium and reduced potassium and calcium contents in large amounts under salt stress. Fresh weight, Rubisco and AGPase activities, and starch content were significantly decreaseded in the first day but recovered gradually in the following days and accumulated more starch than control from Day 3 to Day 5 when treated with 100 mM and 150 mM NaCl. A total of 2156 differentially expressed genes were identified. Overall, the genes related to ethylene metabolism, major CHO degradation, lipid degradation, N-metabolism, secondary metabolism of flavonoids, and abiotic stress were significantly increased, while those involved in cell cycle and organization, cell wall, mitochondrial electron transport of ATP synthesis, light reaction of photosynthesis, auxin metabolism, and tetrapyrrole synthesis were greatly inhibited. Moreover, salt stress also significantly influenced the expression of transcription factors that are mainly involved in abiotic stress and cell differentiation. However, most of the osmosensing calcium antiporters (OSCA) and the potassium inward channels were downregulated, Na+/H+ antiporters (SOS1 and NHX) and a Na+/Ca2+ exchanger were slightly upregulated, but most of them did not respond significantly to salt stress. These results indicated that the ion homeostasis was strongly disturbed. Finally, the shared and distinct regulatory networks of salt stress responses between duckweeds and other plants were intensively discussed. Taken together, these findings provide novel insights into the underlying mechanisms of salt stress response in duckweeds, and can be served as a useful foundation for salt tolerance improvement of duckweeds for the application in salinity conditions.

scholarly journals Toward understanding transcriptional regulatory networks in abiotic stress responses and tolerance in rice

Rice ◽  
2012 ◽  
Vol 5 (1) ◽  
pp. 6 ◽  
Author(s):  
Daisuke Todaka ◽  
Kazuo Nakashima ◽  
Kazuo Shinozaki ◽  
Kazuko Yamaguchi-Shinozaki
Keyword(s):  
Abiotic Stress ◽  
Stress Responses ◽  
Regulatory Networks ◽  
Transcriptional Regulatory Networks ◽  
Transcriptional Regulatory

scholarly journals Small DNA Methylation, Big Player in Plant Abiotic Stress Responses and Memory

2020 ◽  
Vol 11 ◽  
Author(s):  
Junzhong Liu ◽  
Zuhua He
Keyword(s):  
Dna Methylation ◽  
Abiotic Stress ◽  
Stress Responses ◽  
Abiotic Stresses ◽  
Genome Stability ◽  
Plant Stress ◽  
Epigenetic Inheritance ◽  
Future Research ◽  
Epigenetic Mark ◽  
Plant Responses

DNA methylation is a conserved epigenetic mark that plays important roles in maintaining genome stability and regulating gene expression. As sessile organisms, plants have evolved sophisticated regulatory systems to endure or respond to diverse adverse abiotic environmental challenges, i.e., abiotic stresses, such as extreme temperatures (cold and heat), drought and salinity. Plant stress responses are often accompanied by changes in chromatin modifications at diverse responsive loci, such as 5-methylcytosine (5mC) and N6-methyladenine (6mA) DNA methylation. Some abiotic stress responses are memorized for several hours or days through mitotic cell divisions and quickly reset to baseline levels after normal conditions are restored, which is referred to as somatic memory. In some cases, stress-induced chromatin marks are meiotically heritable and can impart the memory of stress exposure from parent plants to at least the next stress-free offspring generation through the mechanisms of transgenerational epigenetic inheritance, which may offer the descendants the potential to be adaptive for better fitness. In this review, we briefly summarize recent achievements regarding the establishment, maintenance and reset of DNA methylation, and highlight the diverse roles of DNA methylation in plant responses to abiotic stresses. Further, we discuss the potential role of DNA methylation in abiotic stress-induced somatic memory and transgenerational inheritance. Future research directions are proposed to develop stress-tolerant engineered crops to reduce the negative effects of abiotic stresses.

scholarly journals Biotic and Abiotic Stress Responses in Crop Plants

Agronomy ◽  
2018 ◽  
Vol 8 (11) ◽  
pp. 267 ◽  
Author(s):  
Thomas Dresselhaus ◽  
Ralph Hückelhoven
Keyword(s):  
Abiotic Stress ◽  
Stress Responses ◽  
Physiological Stress ◽  
Crop Plants ◽  
Future Research ◽  
Special Issue ◽  
Biotic And Abiotic Stress ◽  
Biotic And Abiotic Stresses ◽  
Breeding Programs

Agricultural productivity depends on increasingly extreme weather phenomena, and the use of germplasm that has to be continuously improved by plant breeders to become tolerant to various biotic and abiotic stresses. Molecular plant biologists try to understand the mechanisms associated with stress responses and provide knowledge that could be used in breeding programs. To provide a partial overview about our current understanding about molecular and physiological stress responses, and how this knowledge can be used in agriculture, we have edited a special issue on “Biotic and Abiotic Stress Responses in Crop Plants”. Contributions are from different fields including heat stress responses, stress responses during drought and salinity, as well as during flooding, and resistance and susceptibility to pathogenetic stresses and about the role of plant functional metabolites in biotic stress responses. Future research demand in particular areas of crop stress physiology is discussed, as well as the importance of translational research and investigations directly in elite crop plants and in the genetic resources available for breeding.

scholarly journals Get Together: The Interaction between Melatonin and Salicylic Acid as a Strategy to Improve Plant Stress Tolerance

Agronomy ◽  
2020 ◽  
Vol 10 (10) ◽  
pp. 1486
Author(s):  
Alfonso Albacete
Keyword(s):  
Salicylic Acid ◽  
Abiotic Stress ◽  
Stress Tolerance ◽  
Stress Responses ◽  
Abiotic Stress Tolerance ◽  
Plant Stress ◽  
Future Research ◽  
Biotic And Abiotic Stress ◽  
Plant Stress Responses ◽  
Action Model

Both melatonin and salicylic acid (SA) have been demonstrated to play multiple functions in plant physiological processes and biotic and abiotic stress responses. So far, these regulatory molecules have been separately studied despite sharing a common biosynthetic precursor and their similar physiological actions and stress regulation signals. The review published in Agronomy by Hernández-Ruiz and Arnao entitled “Relationship of melatonin and salicylic acid in biotic/abiotic stress responses” highlights the coincidences and similarities of both regulatory molecules via a thorough literature search and proposes an action model for their interaction in plant stress responses. Despite the undeniable interest and potential impact of this view, it has been focused only on coincident regulatory aspects of SA and melatonin, and the antioxidant-mediated model of interaction that has been proposed is rather speculative and needs to be mechanistically demonstrated. Nevertheless, the mentioned review leads to future research on the melatonin-SA crosstalk to improve biotic and abiotic stress tolerance, which is of utmost importance to ensure food production in the actual age of pandemics and for the upcoming climate crisis scenario.

Homology, Genes, and Evolutionary Innovation

2014 ◽  
Author(s):  
Günter P. Wagner
Keyword(s):  
Evolutionary Biology ◽  
Regulatory Networks ◽  
Biological Diversity ◽  
Cell Types ◽  
Origin And Evolution ◽  
Major Transitions ◽  
Form And Function ◽  
Historical Continuity ◽  
Evolutionary Innovation ◽  
Character Identity

Homology—a similar trait shared by different species and derived from common ancestry, such as a seal's fin and a bird's wing—is one of the most fundamental yet challenging concepts in evolutionary biology. This book provides the first mechanistically based theory of what homology is and how it arises in evolution. The book argues that homology, or character identity, can be explained through the historical continuity of character identity networks—that is, the gene regulatory networks that enable differential gene expression. It shows how character identity is independent of the form and function of the character itself because the same network can activate different effector genes and thus control the development of different shapes, sizes, and qualities of the character. Demonstrating how this theoretical model can provide a foundation for understanding the evolutionary origin of novel characters, the book applies it to the origin and evolution of specific systems, such as cell types; skin, hair, and feathers; limbs and digits; and flowers. The first major synthesis of homology to be published in decades, this book reveals how a mechanistically based theory can serve as a unifying concept for any branch of science concerned with the structure and development of organisms, and how it can help explain major transitions in evolution and broad patterns of biological diversity.

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