scholarly journals Coral Reef Image Classifications with Hybrid Methods

There are several organisms on oceans. Among the organisms coral reefs are the one with 800 species. Classifying coral is a difficult task. Scientist classify the coral organism and put in to groups based on their characteristics. There are several machine learning algorithms are implemented to analyzer and classify the coral species. The main aim of this work is to effectively use handcrafted features with deep features for classifying the coral classes. Here the state of art feature descriptors such as Local Binary Pattern, Local Arc Pattern and Improved Webbers Binary Code are proposed to extract the features of coral. The results which obtained can be further improved by combining these local descriptors with convolution neural network .The feature extracted by above methods are classified using KNN and Random Forest. Experiments with these methods are conducted using EILAT dataset. The Experimental results obtained by these methods demonstrate the effectiveness and robustness of our proposed method.

Author(s):  
Michael Fortunato ◽  
Connor W. Coley ◽  
Brian Barnes ◽  
Klavs F. Jensen

This work presents efforts to augment the performance of data-driven machine learning algorithms for reaction template recommendation used in computer-aided synthesis planning software. Often, machine learning models designed to perform the task of prioritizing reaction templates or molecular transformations are focused on reporting high accuracy metrics for the one-to-one mapping of product molecules in reaction databases to the template extracted from the recorded reaction. The available templates that get selected for inclusion in these machine learning models have been previously limited to those that appear frequently in the reaction databases and exclude potentially useful transformations. By augmenting open-access datasets of organic reactions with artificially calculated template applicability and pretraining a template relevance neural network on this augmented applicability dataset, we report an increase in the template applicability recall and an increase in the diversity of predicted precursors. The augmentation and pretraining effectively teaches the neural network an increased set of templates that could theoretically lead to successful reactions for a given target. Even on a small dataset of well curated reactions, the data augmentation and pretraining methods resulted in an increase in top-1 accuracy, especially for rare templates, indicating these strategies can be very useful for small datasets.


2017 ◽  
Vol 12 (3) ◽  
pp. 193-202 ◽  
Author(s):  
Zhiyuan Xia ◽  
Aiqun Li ◽  
Jianhui Li ◽  
Maojun Duan

Two hybrid model updating methods by integration of Gaussian mutation particle swarm optimization method, Latin Hypercube Sampling technique and meta models of Kriging and Back-Propagation Neural Network respectively were proposed, and the methods make the convergence speed of the model updating process faster and the Finite Element Model more adequate. Through the application of the hybrid methods to model updating process of a self-anchored suspension bridge in-service with extra-width, which showed great necessity considering the ambient vibration test results, the comparison of the two proposed methods was made. The results indicate that frequency differences between test and modified model were narrowed compared to results between test and original model after model updating using both methods as all the values are less than 6%, which is 25%−40% initially. Furthermore, the Model Assurance Criteria increase a little illustrating that more agreeable mode shapes are obtained as all of the Model Assurance Criteria are over 0.86. The particular advancements indicate that a relatively more adequate Finite Element Model is yielded with high efficiency without losing accuracy by both methods. However, the comparison among the two hybrid methods shows that the one with Back-Propagation Neural Network meta model is better than the one with Kriging meta model as the frequency differences of the former are mostly under 5%, but the latter ones are not. Furthermore, the former has higher efficiency than the other as the convergence speed of the former is faster. Thus, the hybrid method, within Gaussian mutation particle swarm optimization method and Back-Propagation Neural Network meta model, is more suitable for model updating of engineering applications with large-scale, multi-dimensional parameter structures involving implicit performance functions.


2020 ◽  
Author(s):  
Michael Fortunato ◽  
Connor W. Coley ◽  
Brian Barnes ◽  
Klavs F. Jensen

This work presents efforts to augment the performance of data-driven machine learning algorithms for reaction template recommendation used in computer-aided synthesis planning software. Often, machine learning models designed to perform the task of prioritizing reaction templates or molecular transformations are focused on reporting high accuracy metrics for the one-to-one mapping of product molecules in reaction databases to the template extracted from the recorded reaction. The available templates that get selected for inclusion in these machine learning models have been previously limited to those that appear frequently in the reaction databases and exclude potentially useful transformations. By augmenting open-access datasets of organic reactions with artificially calculated template applicability and pretraining a template relevance neural network on this augmented applicability dataset, we report an increase in the template applicability recall and an increase in the diversity of predicted precursors. The augmentation and pretraining effectively teaches the neural network an increased set of templates that could theoretically lead to successful reactions for a given target. Even on a small dataset of well curated reactions, the data augmentation and pretraining methods resulted in an increase in top-1 accuracy, especially for rare templates, indicating these strategies can be very useful for small datasets.


2020 ◽  
pp. 1-11
Author(s):  
Wenjuan Ma ◽  
Xuesi Zhao ◽  
Yuxiu Guo

The application of artificial intelligence and machine learning algorithms in education reform is an inevitable trend of teaching development. In order to improve the teaching intelligence, this paper builds an auxiliary teaching system based on computer artificial intelligence and neural network based on the traditional teaching model. Moreover, in this paper, the optimization strategy is adopted in the TLBO algorithm to reduce the running time of the algorithm, and the extracurricular learning mechanism is introduced to increase the adjustable parameters, which is conducive to the algorithm jumping out of the local optimum. In addition, in this paper, the crowding factor in the fish school algorithm is used to define the degree or restraint of teachers’ control over students. At the same time, students in the crowded range gather near the teacher, and some students who are difficult to restrain perform the following behavior to follow the top students. Finally, this study builds a model based on actual needs, and designs a control experiment to verify the system performance. The results show that the system constructed in this paper has good performance and can provide a theoretical reference for related research.


2020 ◽  
Vol 23 (4) ◽  
pp. 274-284 ◽  
Author(s):  
Jingang Che ◽  
Lei Chen ◽  
Zi-Han Guo ◽  
Shuaiqun Wang ◽  
Aorigele

Background: Identification of drug-target interaction is essential in drug discovery. It is beneficial to predict unexpected therapeutic or adverse side effects of drugs. To date, several computational methods have been proposed to predict drug-target interactions because they are prompt and low-cost compared with traditional wet experiments. Methods: In this study, we investigated this problem in a different way. According to KEGG, drugs were classified into several groups based on their target proteins. A multi-label classification model was presented to assign drugs into correct target groups. To make full use of the known drug properties, five networks were constructed, each of which represented drug associations in one property. A powerful network embedding method, Mashup, was adopted to extract drug features from above-mentioned networks, based on which several machine learning algorithms, including RAndom k-labELsets (RAKEL) algorithm, Label Powerset (LP) algorithm and Support Vector Machine (SVM), were used to build the classification model. Results and Conclusion: Tenfold cross-validation yielded the accuracy of 0.839, exact match of 0.816 and hamming loss of 0.037, indicating good performance of the model. The contribution of each network was also analyzed. Furthermore, the network model with multiple networks was found to be superior to the one with a single network and classic model, indicating the superiority of the proposed model.


2020 ◽  
Vol 14 ◽  
Author(s):  
Lahari Tipirneni ◽  
Rizwan Patan

Abstract:: Millions of deaths all over the world are caused by breast cancer every year. It has become the most common type of cancer in women. Early detection will help in better prognosis and increases the chance of survival. Automating the classification using Computer-Aided Diagnosis (CAD) systems can make the diagnosis less prone to errors. Multi class classification and Binary classification of breast cancer is a challenging problem. Convolutional neural network architectures extract specific feature descriptors from images, which cannot represent different types of breast cancer. This leads to false positives in classification, which is undesirable in disease diagnosis. The current paper presents an ensemble Convolutional neural network for multi class classification and Binary classification of breast cancer. The feature descriptors from each network are combined to produce the final classification. In this paper, histopathological images are taken from publicly available BreakHis dataset and classified between 8 classes. The proposed ensemble model can perform better when compared to the methods proposed in the literature. The results showed that the proposed model could be a viable approach for breast cancer classification.


2021 ◽  
Vol 11 (4) ◽  
pp. 1829
Author(s):  
Davide Grande ◽  
Catherine A. Harris ◽  
Giles Thomas ◽  
Enrico Anderlini

Recurrent Neural Networks (RNNs) are increasingly being used for model identification, forecasting and control. When identifying physical models with unknown mathematical knowledge of the system, Nonlinear AutoRegressive models with eXogenous inputs (NARX) or Nonlinear AutoRegressive Moving-Average models with eXogenous inputs (NARMAX) methods are typically used. In the context of data-driven control, machine learning algorithms are proven to have comparable performances to advanced control techniques, but lack the properties of the traditional stability theory. This paper illustrates a method to prove a posteriori the stability of a generic neural network, showing its application to the state-of-the-art RNN architecture. The presented method relies on identifying the poles associated with the network designed starting from the input/output data. Providing a framework to guarantee the stability of any neural network architecture combined with the generalisability properties and applicability to different fields can significantly broaden their use in dynamic systems modelling and control.


Processes ◽  
2021 ◽  
Vol 9 (6) ◽  
pp. 919
Author(s):  
Wanlu Jiang ◽  
Chenyang Wang ◽  
Jiayun Zou ◽  
Shuqing Zhang

The field of mechanical fault diagnosis has entered the era of “big data”. However, existing diagnostic algorithms, relying on artificial feature extraction and expert knowledge are of poor extraction ability and lack self-adaptability in the mass data. In the fault diagnosis of rotating machinery, due to the accidental occurrence of equipment faults, the proportion of fault samples is small, the samples are imbalanced, and available data are scarce, which leads to the low accuracy rate of the intelligent diagnosis model trained to identify the equipment state. To solve the above problems, an end-to-end diagnosis model is first proposed, which is an intelligent fault diagnosis method based on one-dimensional convolutional neural network (1D-CNN). That is to say, the original vibration signal is directly input into the model for identification. After that, through combining the convolutional neural network with the generative adversarial networks, a data expansion method based on the one-dimensional deep convolutional generative adversarial networks (1D-DCGAN) is constructed to generate small sample size fault samples and construct the balanced data set. Meanwhile, in order to solve the problem that the network is difficult to optimize, gradient penalty and Wasserstein distance are introduced. Through the test of bearing database and hydraulic pump, it shows that the one-dimensional convolution operation has strong feature extraction ability for vibration signals. The proposed method is very accurate for fault diagnosis of the two kinds of equipment, and high-quality expansion of the original data can be achieved.


2021 ◽  
Vol 22 (S3) ◽  
Author(s):  
Junyi Li ◽  
Huinian Li ◽  
Xiao Ye ◽  
Li Zhang ◽  
Qingzhe Xu ◽  
...  

Abstract Background The prediction of long non-coding RNA (lncRNA) has attracted great attention from researchers, as more and more evidence indicate that various complex human diseases are closely related to lncRNAs. In the era of bio-med big data, in addition to the prediction of lncRNAs by biological experimental methods, many computational methods based on machine learning have been proposed to make better use of the sequence resources of lncRNAs. Results We developed the lncRNA prediction method by integrating information-entropy-based features and machine learning algorithms. We calculate generalized topological entropy and generate 6 novel features for lncRNA sequences. By employing these 6 features and other features such as open reading frame, we apply supporting vector machine, XGBoost and random forest algorithms to distinguish human lncRNAs. We compare our method with the one which has more K-mer features and results show that our method has higher area under the curve up to 99.7905%. Conclusions We develop an accurate and efficient method which has novel information entropy features to analyze and classify lncRNAs. Our method is also extendable for research on the other functional elements in DNA sequences.


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