scholarly journals Assessment of Open Grown Trees Composition and Diversity in Selected Research Institutes in Peri-Urban Ibadan, Oyo state, Nigeria

2021 ◽  
Vol 25 (7) ◽  
pp. 1263-1269
Author(s):  
B.L. Olajiire-Ajayi ◽  
R.T. Ibode ◽  
A.A. Tunde-Francis ◽  
S.O. Okeleke
Keyword(s):  
Tree Species ◽  
Diversity Index ◽  
Growth Characteristics ◽  
Shannon Diversity Index ◽  
Species Dominance ◽  
Diameter At Breast Height ◽  
Breast Height ◽  
Shannon Diversity ◽  
A Value ◽  
Research Institutes

Urban green spaces are rapidly deteriorating in most parts of Nigeria. The study assessed open grown trees composition and diversity in selected Research Institutes within Ibadan Region with the aim of comparing the ecological diversity in the study locations. This was achieved through species identification and mensuration of all open grown trees species that were accessible in the study areas. Open grown trees with Diameter at breast height ≥ 10cm were assessed for growth characteristics of total height and diameter at breast height. Basal area and volume were estimated from measured growth characteristics. Tree species were identified by a taxonomist at Federal Herbarium in Ibadan. Biodiversity indices of Shannon diversity index, species evenness and species dominance were computed to see variation in tree community of the areas. The Shannon diversity index calculated was higher in IITA with a value of 3.04 compared to that of CRIN with a value of 2.36. A dominance value of 0.15 and 0.05 was obtained for CRIN and IITA respectively. The study concludes that both institutes are repository of large diversity of tree species thereby, helping in the conservation of biodiversity while ameliorating weather. It is recommended that educational institutions from all levels located within the region as well as private organizations and individuals should plant trees within their domains in order to create conducive green environments that would promote sustainable environment in the region. This is possible when government provide adequate incentive and annual rewards for establishments with the best green environments.

scholarly journals On a Variational Definition for the Jensen-Shannon Symmetrization of Distances Based on the Information Radius

Entropy ◽  
2021 ◽  
Vol 23 (4) ◽  
pp. 464
Author(s):  
Frank Nielsen
Keyword(s):  
Diversity Index ◽  
Diversity Indices ◽  
Shannon Diversity Index ◽  
Probability Measures ◽  
Variational Optimization ◽  
Shannon Diversity ◽  
Concept Of Information ◽  
Jensen Shannon Divergence

We generalize the Jensen-Shannon divergence and the Jensen-Shannon diversity index by considering a variational definition with respect to a generic mean, thereby extending the notion of Sibson’s information radius. The variational definition applies to any arbitrary distance and yields a new way to define a Jensen-Shannon symmetrization of distances. When the variational optimization is further constrained to belong to prescribed families of probability measures, we get relative Jensen-Shannon divergences and their equivalent Jensen-Shannon symmetrizations of distances that generalize the concept of information projections. Finally, we touch upon applications of these variational Jensen-Shannon divergences and diversity indices to clustering and quantization tasks of probability measures, including statistical mixtures.

scholarly journals PRESERVATION OF PRIMARY FOREST CHARACTERISTICS DESPITE FRAGMENTATION AND ISOLATION IN A FOREST REMNANT FROM VIÇOSA, MG, BRAZIL1

2015 ◽  
Vol 39 (6) ◽  
pp. 985-994 ◽  
Author(s):  
Markus Gastauer ◽  
Marcos Eduardo Guerra Sobral ◽  
João Augusto Alves Meira-Neto
Keyword(s):  
Species Richness ◽  
Endemic Species ◽  
Tree Species ◽  
Primary Forest ◽  
Forest Patch ◽  
Diameter At Breast Height ◽  
Breast Height ◽  
Forest Remnant ◽  
Primary Forests ◽  
Biotic Resources

According to its owners, the Forest of Seu Nico (FSN) from the Viçosa municipality, Minas Gerais, Brazil, never has been logged and is therefore considered a primary forest. Nevertheless, the forest patch suffered impacts due to selective wood and non-timber extraction, fragmentation and isolation. Aim of this study was to test if the FSN, despite impacts, preserved characteristics of primary forests, which are elevated percentages of non-pioneer (>90%), animal-dispersed (>80 %), understory (>50%) and endemic species (~40%). For that, all trees with diameter at breast height equal or major than 3.2 cm within a plot of 100 x 100 m were identified. With 218 tree species found within this hectare, the FSN's species richness is outstanding for the region. The percentages of non-pioneer (92 %), animal-dispersed (85 %), understory (55 %) and endemic species (39.2 %) from the FSN fulfill the criteria proposed for primary forest. Therefore, we conclude that the FSN maintained its characteristics as a primary forest which highlights its importance for the conservation of biotic resources in the region, where similar fragments are lacking or not described yet.

scholarly journals Species richness and diversity in shrub savanna using ordinary kriging

2016 ◽  
Vol 51 (8) ◽  
pp. 958-966 ◽  
Author(s):  
Anderson Pedro Bernardina Batista ◽  
José Márcio de Mello ◽  
Marcel Régis Raimundo ◽  
Henrique Ferraço Scolforo ◽  
Aliny Aparecida dos Reis ◽  
...  
Keyword(s):  
Spatial Distribution ◽  
Species Richness ◽  
Spatial Dependence ◽  
Ordinary Kriging ◽  
Diversity Index ◽  
Spatial Models ◽  
Shannon Diversity Index ◽  
Shannon Diversity ◽  
Species Richness And Diversity ◽  
Number Of Species

Abstract: The objective of this work was to analyze the spatial distribution and the behavior of species richness and diversity in a shrub savanna fragment, in 2003 and 2014, using ordinary kriging, in the state of Minas Gerais, Brazil. In both evaluation years, the measurements were performed in a fragment with 236.85 hectares, in which individual trees were measured and identified across 40 plots (1,000 m2). Species richness was determined by the total number of species in each plot, and diversity by the Shannon diversity index. For the variogram study, spatial models were fitted and selected. Then, ordinary kriging was applied and the spatial distribution of the assessed variables was described. A strong spatial dependence was observed between species richness and diversity by the Shannon diversity index (<25% spatial dependence degree). Areas of low and high species diversity and richness were found in the shrub savanna fragment. Spatial distribution behavior shows relative stability regarding the number of species and the Shannon diversity index in the evaluated years.

scholarly journals A checklist of gilled mushrooms (Basidiomycota: Agaricomycetes) with diversity analysis in Hollongapar Gibbon Wildlife Sanctuary, Assam, India

2015 ◽  
Vol 7 (15) ◽  
pp. 8272 ◽  
Author(s):  
Girish Gogoi ◽  
Vipin Parkash
Keyword(s):  
Species Richness ◽  
Diversity Index ◽  
Abundant Species ◽  
Shannon Diversity Index ◽  
Diversity Analysis ◽  
Wildlife Sanctuary ◽  
Shannon Diversity ◽  
Number Of Species ◽  
Simpson Diversity Index ◽  
Richness Index

<p>Hollongapar Gibbon Wildlife Sanctuary is comprised of five distinct compartments.  A total of 138 species of gilled mushrooms belonging to 48 genera, 23 families, five orders of the class Agaricomycetes, division Basidiomycota, have been collected and analyzed. The order Agaricales was was found with the highest number of species (113), followed by Russulales (14), Polyporales (5), Cantharellales (4) and Boletales (2). The species <em>Coprinellus disseminatus </em>and <em>Megacollybia rodmani</em> have shown the highest (8.26) and the lowest density (0.05), respectively.  A total of 24 species, e.g., <em>Termitomyces albuminosus, Marasmius curreyi, Marasmiellus candidus, Leucocoprinus medioflavus, Mycena leaiana, Hygrocybe miniata, Collybia chrysoropha, Gymnopus confluens</em> were common with frequency percentage of 11.9, whereas <em>Megacollybia rodmani</em> with less frequency percentage (2.4) was found only in few quadrates of the sanctuary.  The highly abundant species were <em>Termitomyces medius</em> (91.7) and <em>Coprinellus disseminatus </em>(86.8), and less abundant species were <em>Psilocybe wayanadensis</em> (1.0) and <em>Lepiota</em> sp. (1.0) in the study site.  The order of the species richness index (<em>R</em>) compartment wise was 2&gt;3&gt;4&gt;5&gt;1. Both the Shannon diversity index and Simpson diversity index of agarics was maximum (1.88, 0.98) in compartment 2, whereas minimum (1.72, 0.95) in compartment 1 and 5, respectively.  Moreover, the compartment 2 was found very much similar with compartment 3 and very less similar with compartment 1.</p><div> </div>

scholarly journals Modeling Soil Erosion and Landscape Metric Analysis of River Catchments in Pulau Pinang, Malaysia

2020 ◽  
Vol 55 (3) ◽  
Author(s):  
Sumayyah Aimi Mohd Najib
Keyword(s):  
Land Use ◽  
Soil Erosion ◽  
Soil Loss ◽  
Diversity Index ◽  
Land Use Changes ◽  
Shannon Diversity Index ◽  
Universal Soil Loss Equation ◽  
Data Sampling ◽  
Shannon Diversity ◽  
Soil Loss Equation

To determine the soil erosion in ungauged catchments, the author used 2 methods: Universal Soil Loss Equation model and sampling data. Sampling data were used to verify and validate data from model. Changing land use due to human activities will affect soil erosion. Land use has changed significantly during the last century in Pulau Pinang. The main rapid changes are related to agriculture, settlement, and urbanization. Because soil erosion depends on surface runoff, which is regulated by the structure of land use and brought about through changes in slope length, land-use changes are one of many factors influencing land degradation caused by erosion. The Universal Soil Loss Equation was used to estimate past soil erosion based on land uses from 1974 to 2012. Results indicated a significant increase in three land-use categories: forestry, built-up areas, and agriculture. Another method to evaluate land use changes in this study was by using landscape metrics analysis. The mean patch size of built-up area and forest increased, while agriculture land use decreased from 48.82 patches in 1974 to 22.46 patches in 2012. Soil erosion increased from an estimated 110.18 ton/km2/year in 1974 to an estimated 122.44 ton/km2/year in 2012. Soil erosion is highly related (R2 = 0.97) to the Shannon Diversity Index, which describes the diversity in land-use composition in river basins. The Shannon Diversity Index also increased between 1974 and 2012. The findings from this study can be used for future reference and for ungauged catchment research studies.

Exercise training-induced changes in the gut microbiota of Standardbred racehorses

2016 ◽  
Vol 12 (3) ◽  
pp. 119-130 ◽  
Author(s):  
A.H.D. Janabi ◽  
A.S. Biddle ◽  
D. Klein ◽  
K.H. McKeever
Keyword(s):  
Exercise Training ◽  
Gut Microbiota ◽  
Diversity Index ◽  
Training Group ◽  
The Body ◽  
Shannon Diversity Index ◽  
Training Period ◽  
Control Group ◽  
Shannon Diversity ◽  
Over Time

Exercise has a significant effect on different physiological systems in the body of human and animals. Only limited numbers of published studies in laboratory animals or humans have shown the effect of exercise on the gut microbiota, and no studies have shown this effect in horses. In this study, 8 horses (4 mares, 4 geldings) were exercise trained for 12 weeks, and 4 additional mares were used as a parallel seasonal control. To identify bacterial community changes over time for both groups, rectal faecal samples were collected, DNA was extracted, and the 16S rRNA gene (V3-V4) was sequenced using the Illumina Miseq platform. One-way ANOVA, Shannon diversity index, and Principal Coordinate Analysis (PCoA) were used to identify differences between and among samples. The exercise training group showed significant changes in the levels of Bacteroidetes, Proteobacteria, and Spirochaetes phyla (P<0.05), while there were no changes in the gut microbiota of the seasonal control group through the three months of the study (P>0.05). Moreover, with training two genera significantly changed in their relative abundance over time, namely Clostridium and Dysgonomonas (P<0.05). Dysgonomonas spp. was significantly changed in abundance during the exercise training period (P<0.05). Also Treponema spp. showed significant changes during the exercise training period (P<0.05). Shannon diversity index was decreased (P<0.05) in the exercise group at the beginning of the study, but then returned to pre-training levels. PCoA showed significant separation between time points of the exercise training group as far as the levels of genera and species (P<0.05) represented. Our results show that exercise training influences the gut microbiota, especially at the beginning of training.

Impact of sedimentary processes on white-sand vegetation in an Amazonian megafan

2016 ◽  
Vol 32 (6) ◽  
pp. 498-509 ◽  
Author(s):  
Carlos L. O. Cordeiro ◽  
Dilce F. Rossetti ◽  
Rogério Gribel ◽  
Hanna Tuomisto ◽  
Hiran Zani ◽  
...  
Keyword(s):  
Remote Sensing ◽  
Tree Species ◽  
Late Quaternary ◽  
Remote Sensing Data ◽  
Canopy Height ◽  
Group Method ◽  
White Sand ◽  
Diameter At Breast Height ◽  
Tree Distribution ◽  
Breast Height

Abstract:Amazonian white-sand vegetation has unique tree communities tolerant to nutrient-poor soils of interest for interpreting processes of adaptation in neotropical forests. Part of this phytophysionomy is confined to Late Quaternary megafan palaeo-landforms, thus we posit that sedimentary disturbance is the main ecological factor controlling tree distribution and structuring in this environment. In this study, we characterize the topographic trend of one megafan palaeo-landform using a digital elevation model and verify its relationship to the forest by modelling the canopy height with remote sensing data. We also compare the composition and structure (i.e. canopy height and diameter at breast height) of tree groups from the outer and inner megafan environments based on the integration of remote sensing and floristic data. The latter consist of field inventories of trees ≥ 10 cm dbh using six (500 × 20 m) plots in várzea, terra firme and igapó from the outer megafan and 20 (50 × 20 m) plots in woodlands and forests from the inner megafan. The unweighted pair group method with arithmetic mean (UPGMA) and the non-metric multidimensional scaling (NMDS) were applied for clustering and dissimilarity analyses, respectively. The megafan is a sand-dominated triangular wetland with a topographic gradient of < 15 cm km−1, being more elevated along its axis. The outer megafan has a higher number of tree species (367), taller canopy height (mean of 14.1 m) and higher diameter at breast height (mean of 18.2 cm) than the white-sand forest. The latter records 89 tree species, mean canopy height of 8.4 cm and mean diameter at breast height of 15.3 cm. Trees increase in frequency closer to channels and toward the megafan's axis. The flooded and nutrient-poor sandy megafan substrate favoured the establishment of white-sand vegetation according to the overall megafan topography and morphological heterogeneities inherent to megafan sub-environments.

Biomass of jack pine and mixed hardwood stands in northeastern New Brunswick

1976 ◽  
Vol 6 (4) ◽  
pp. 441-447 ◽  
Author(s):  
David A. MacLean ◽  
Ross W. Wein
Keyword(s):  
New Brunswick ◽  
Tree Species ◽  
Biomass Accumulation ◽  
Jack Pine ◽  
Tree Crown ◽  
Tree Diameter ◽  
Stem Biomass ◽  
Diameter At Breast Height ◽  
Breast Height ◽  
Fire Origin

Biomass accumulation in 12 jack pine and 11 mixed hardwood stands of fire origin ranging in age from 7 to 57 years is presented. Logarithmic equations relating aboveground tree, crown, and stem biomass to tree diameter at breast height are given for eight tree species.

scholarly journals Prevalence of Diarrhoeagenic Escherichia Coli and Associated Risk Factors in Dug Wells in Ile-Ife, Southwestern Nigeria

2021 ◽  
Author(s):  
Babatunde Odetoyin ◽  
Olawumi Ogundipe ◽  
Adebola Onanuga
Keyword(s):  
Risk Factors ◽  
Escherichia Coli ◽  
Drinking Water ◽  
Diversity Index ◽  
Shannon Diversity Index ◽  
Southwestern Nigeria ◽  
E Coli ◽  
Shannon Diversity ◽  
Dug Wells ◽  
Associated Risk Factors

Abstract BackgroundDiarrhoeagenic Escherichia coli (DEC) strains are common bacterial causes of morbidity and mortality in young children. Waterborne DEC could pose a potential health risk to humans through domestic use of contaminated water. However, epidemiological studies on DEC strains in drinking water are scarce in Nigeria. This study determined the prevalence, diversity and factors associated with the presence of DEC in dug wells in Ile-Ife, southwestern Nigeria.MethodsWe assessed 143 wells for safety by coliform count using the multiple tube technique. A standardized questionnaire was used to obtain relevant information about the wells and their owners. Contaminating isolates were identified as E. coli by amplifying their 16S rRNA gene. Five DEC pathotypes comprising enterotoxigenic E. coli (ETEC), enteroaggregative E. coli (EAEC) enteroinvasive E. coli (EIEC), enteropathogenic E. coli (EPEC) and Shiga-toxin producing E. coli (STEC) were detected using two sets of multiplex PCR assays. Isolates diversity was determined by (GTG)5 Repetitive element palindromic PCR and Shannon diversity index. Multivariate logistic regression analysis was used to identify associated risk factors. Results Fifty-eight (40.6%) wells were contaminated by diarrhoeagenic E. coli. Wells with dirty platforms, damaged by erosion and sited near septic tanks significantly harboured DEC (p<0.05). There was a preponderance of STEC among the isolates with nine isolates carrying multiple diarrhoeagenic genes and 10 (17.2%) wells contaminated by multiple DEC strains. The (GTG)5-PCR fingerprinting assigned all DEC strains into six clades, with an overall Shannon diversity index of 18.87. A diverse profile was obtained among and between the isolates recovered from different sources.ConclusionsThe presence of DEC strains in drinking water highlights the risk to human health associated with the use of untreated water. There was a high degree of genetic diversity among the isolates implying multiple sources of contamination. There is a need for periodic sanitation and inspection of wells for cracks to prevent seepages and possible outbreaks of waterborne diseases.

scholarly journals Unexplained Relationships of Height-Diameter of Three Tree Species in a Tropical Forest.

2013 ◽  
Vol 6 (3) ◽  
pp. 196-204
Keyword(s):  
Tree Species ◽  
Coefficient Of Determination ◽  
Multivariate Models ◽  
Forest Reserve ◽  
Permanent Sample Plots ◽  
Tree Distance ◽  
Diameter At Breast Height ◽  
Breast Height ◽  
Bivariate Models

Associations between bivariate variables relative to the unexplained relationships of height-Dbh (diameter at breast height) models were investigated. Seven permanent sample plots measuring 40m by 250m at Omo Forest Reserve were used to assess the relationships between height and diameter at breast height of three tree species as affected by the variables of neighbouring trees. The result showed differences in the coefficient of determination of the bivariate models and multivariate models. The models arrived at for each of the species and for the bivariate models are: Scottelia coriaceae: Ht = 2.59 + 0.473D+ 0.0012D2 for 5cm ≤ D ≤100cm (R2 = 0.70) Sterculia rhinopetala: Ht = 5.96 + 0.467D+ 0.00296D2 for 5cm ≤ D ≤100cm (R2 = 0.77) Strombosia pustulata: Ht = 2.02 + 0.722D+ 0.00581D2 for 5cm ≤ D ≤ 60cm (R2 = 0.81) Where both Ht and D are height and Diameter at breast height. While on the other hand the multivariate models that considered the effect of neighbouring trees are: Scottelia coriaceae: 2 1 2 3 4 Ht = 3.74 + 0.41x −1.14x + 0.205x +1.278x (R = 0.723) Sterculia rhnopetala: 2 1 2 3 4 Ht = 6.18 + 0.2601x +1.163x + 0.438x − 0.442x (R = 0.608) Strombosia pustalata: 2 1 2 3 4 Ht = 6.84 + 0.399x − 0.318x − 0.138x − 0.838x (R = 0.650) x1 = diameter at breast height, x2 = Mean neighbouring tree distance, x3 = Frequency of the neighbouring tree and x4 = Position of the crown.

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