scholarly journals Paenibacillus strains with nitrogen fixation and multiple beneficial properties for promoting plant growth

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7445 ◽  
Author(s):  
Xiaomeng Liu ◽  
Qin Li ◽  
Yongbin Li ◽  
Guohua Guan ◽  
Sanfeng Chen
Keyword(s):  
Nitrogen Fixation ◽  
Plant Growth ◽  
Plant Pathogens ◽  
Dry Weight ◽  
Gibberella Zeae ◽  
Bacterial Strains ◽  
Gene Encoding ◽  
Fe Protein ◽  
Large Genus ◽  
Nitrogenase Activities

Paenibacillus is a large genus of Gram-positive, facultative anaerobic, endospore-forming bacteria. The genus Paenibacillus currently comprises more than 150 named species, approximately 20 of which have nitrogen-fixation ability. The N2-fixing Paenibacillus strains have potential uses as a bacterial fertilizer in agriculture. In this study, 179 bacterial strains were isolated by using nitrogen-free medium after heating at 85 °C for 10 min from 69 soil samples collected from different plant rhizospheres in different areas. Of the 179 bacterial strains, 25 Paenibacillus strains had nifH gene encoding Fe protein of nitrogenase and showed nitrogenase activities. Of the 25 N2-fixing Paenibacillus strains, 22 strains produced indole-3-acetic acid (IAA). 21 strains out of the 25 N2-fixing Paenibacillus strains inhibited at least one of the 6 plant pathogens Rhizoctonia cerealis, Fusarium graminearum, Gibberella zeae, Fusarium solani, Colletotrichum gossypii and Alternaria longipes. 18 strains inhibited 5 plant pathogens and Paenibacillus sp. SZ-13b could inhibit the growth of all of the 6 plant pathogens. According to the nitrogenase activities, antibacterial capacities and IAA production, we chose eight strains to inoculate wheat, cucumber and tomato. Our results showed that the 5 strains Paenibacillus sp. JS-4, Paenibacillus sp. SZ-10, Paenibacillus sp. SZ-14, Paenibacillus sp. BJ-4 and Paenibacillus sp. SZ-15 significantly promoted plant growth and enhanced the dry weight of plants. Hence, the five strains have the greater potential to be used as good candidates for biofertilizer to facilitate sustainable development of agriculture.

scholarly journals Mutation in the ntrR Gene, a Member of the vap Gene Family, Increases the Symbiotic Efficiency of Sinorhizobium meliloti

2001 ◽  
Vol 14 (7) ◽  
pp. 887-894 ◽  
Author(s):  
Boglárka Oláh ◽  
Erno Kiss ◽  
Zoltán Györgypál ◽  
Judit Borzi ◽  
Gyöngyi Cinege ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Pathogenic Bacteria ◽  
Sinorhizobium Meliloti ◽  
Root Nodules ◽  
Nifh Gene ◽  
Dry Weight ◽  
Nodule Occupancy ◽  
Gene Encoding ◽  
Symbiotic Efficiency ◽  
Host Interactions

In specific plant organs, namely the root nodules of alfalfa, fixed nitrogen (ammonia) produced by the symbiotic partner Sinorhizobium meliloti supports the growth of the host plant in nitrogen-depleted environment. Here, we report that a derivative of S. meliloti carrying a mutation in the chromosomal ntrR gene induced nodules with enhanced nitrogen fixation capacity, resulting in an increased dry weight and nitrogen content of alfalfa. The efficient nitrogen fixation is a result of the higher expression level of the nifH gene, encoding one of the subunits of the nitrogenase enzyme, and nifA, the transcriptional regulator of the nif operon. The ntrR gene, controlled negatively by its own product and positively by the symbiotic regulator syrM, is expressed in the same zone of nodules as the nif genes. As a result of the nitrogen-tolerant phenotype of the strain, the beneficial effect of the mutation on efficiency is not abolished in the presence of the exogenous nitrogen source. The ntrR mutant is highly competitive in nodule occupancy compared with the wild-type strain. Sequence analysis of the mutant region revealed a new cluster of genes, termed the “ntrPR operon,” which is highly homologous to a group of vap-related genes of various pathogenic bacteria that are presumably implicated in bacterium-host interactions. On the basis of its favorable properties, the strain is a good candidate for future agricultural utilization.

scholarly journals Appraising Endophyte–Plant Symbiosis for Improved Growth, Nodulation, Nitrogen Fixation and Abiotic Stress Tolerance: An Experimental Investigation with Chickpea (Cicer arietinum L.)

Agronomy ◽  
2019 ◽  
Vol 9 (10) ◽  
pp. 621 ◽  
Author(s):  
Ahmad ◽  
Naseer ◽  
Hussain ◽  
Zahid Mumtaz ◽  
Mustafa ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Plant Growth ◽  
Root Nodules ◽  
Abiotic Stress Tolerance ◽  
Paenibacillus Polymyxa ◽  
Rrna Gene ◽  
Bacterial Strains ◽  
Pgp Traits ◽  
Paenibacillus Sp

Chickpea is an important leguminous crop that improves soil fertility through atmospheric nitrogen fixation with the help of rhizobia present in nodules. Non-rhizobia endophytes are also capable of inducing nodulation and nitrogen fixation in leguminous crops. The aim of the current study was to isolate, characterize and identify the non-rhizobia endophytic bacterial strains from root nodules of chickpea. For this purpose, more than one hundred isolates were isolated from chickpea root nodules under aseptic conditions and were confirmed as endophytes through re-isolating them from root nodules of chickpea after their inoculation. Nineteen confirmed endophytic bacterial strains revealed significant production of indole acetic acid (IAA) both in presence and absence of L-tryptophan and showed their ability to grow under salt, pH and heavy metal stresses. These strains were evaluated for in vitro plant growth promoting (PGP) traits and results revealed that seven strains showed solubilization of P and colloidal chitin along with possessing catalase, oxidase, urease and chitinase activities. Seven P-solubilizing strains were further evaluated in a jar trial to explore their potential for promoting plant growth and induction of nodulation in chickpea roots. Two endophytic strains identified as Paenibacillus polymyxa ANM59 and Paenibacillus sp. ANM76 through partial sequencing of the 16S rRNA gene showed the maximum potential during in vitro PGP activities and improved plant growth and nodulation in chickpea under the jar trial. Use of these endophytic strains as a potential biofertilizer can help to reduce the dependence on chemical fertilizers while improving crop growth and soil health simultaneously.

scholarly journals Growth response of wheat cultivars to bacterial inoculation in calcareous soil

2010 ◽  
Vol 56 (No. 12) ◽  
pp. 570-573 ◽  
Author(s):  
D. Egamberdieva
Keyword(s):  
Plant Growth ◽  
Calcareous Soil ◽  
Dry Weight ◽  
Plant Growth Promoting Bacteria ◽  
Wheat Cultivars ◽  
Bacterial Strains ◽  
Bacterial Inoculation ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Selection Of

In this study the plant growth-promoting bacteria were analysed for their growth-stimulating effects on two wheat cultivars. The investigations were carried out in pot experiments using calcareous soil. The results showed that bacterial strains Pseudomonas spp. NUU1 and P. fluorescens NUU2 were able to colonize the rhizosphere of both wheat cultivars. Their plant growth-stimulating abilities were affected by wheat cultivars. The bacterial strains Pseudomonas sp. NUU1 and P. fluorescens NUU2 significantly stimulated the shoot and root length and dry weight of wheat cv. Turon, whereas cv. Residence was less affected by bacterial inoculation. The results of our study suggest that inoculation of wheat with Pseudomonas strains can improve plant growth in calcareous soil and it depends upon wheat cultivars. Prior to a selection of good bacterial inoculants, it is recommended to select cultivars that benefit from association with these bacteria.

scholarly journals Plant growth promoting rhizobacteria and their potential as bioinoculants on Pennisetum clandestinum (Poaceae)

2019 ◽  
Vol 67 (4) ◽  
Author(s):  
Felipe Romero-Perdomo ◽  
Jhonnatan Ocampo-Gallego ◽  
Mauricio Camelo-Rusinque ◽  
Ruth Bonila
Keyword(s):  
Plant Growth ◽  
Plant Growth Promotion ◽  
Growth Promotion ◽  
Dry Weight ◽  
Shoot Length ◽  
Rrna Gene ◽  
Bacterial Strains ◽  
Pennisetum Clandestinum ◽  
Shoot Dry Weight ◽  
Root And Shoot Length

In this study, we aimed at examining the potential to stimulate growth in Pennisetum clandestinum using four isolated bacterial strains from soils obtained from a Colombian tropical silvopastoral system. We previously identified genetically the strains and characterized two plant growth promotion activities. We found that the four bacterial strains were phylogenetically associated with Klebsiella sp. (strains 28P and 35P), Beijerinka sp. (37L) and Achromobacter xylosoxidans (E37), based on partial 16S rRNA gene sequencing. Moreover, the in vitro biochemical assays demonstrated that the strains exhibited some plant growth promotion mechanisms such as 1-aminocyclopropane-1-carboxylic acid deaminase activity and indole compound synthesis. Notably, bacterial inoculation under greenhouse conditions showed a positive influence on P. clandestinum growth. We found a significant (p < 0.05) effect on root and shoot length, and shoot dry weight. Shoot length increased by 52% and 30% with 37L and 35P, respectively, compared to those without inoculation treatment. Similarly, the use of 37L and 28P raised shoot dry weight values by 170% and 131%, respectively. In root development, inoculation with strains 37L and E37 increased root length by 134% and 100%, respectively. Beijerinckia sp. 37L was the most effective of the four strains at increasing P. clandestinum biomass and length.

scholarly journals Comparison of Two Commercial Recirculated Aquacultural Systems and Their Microbial Potential in Plant Disease Suppression

2021 ◽  
Author(s):  
Sammar Khalil ◽  
Preeti Panda ◽  
Farideh Ghadamgahi ◽  
AnnaKarin Rosberg ◽  
Ramesh R Vetukuri
Keyword(s):  
Plant Growth ◽  
Fish Species ◽  
Plant Pathogens ◽  
Extracellular Enzymes ◽  
Production Systems ◽  
Sampling Site ◽  
Disease Suppression ◽  
Bacterial Strains ◽  
Promising Tool

Aquaponics are food production systems advocated for food security and health. Their sustainability from a nutritional and plant health perspective is, however, a significant challenge. Recirculated aquaculture systems (RAS) form a major part of aquaponic systems but knowledge about their potential to benefit plant growth and suppress their pathogens is limited. The current study tested if the diversity and function of microbial communities in two commercial RAS were specific to the fish species used (Tilapia or Clarias) and sampling site (fish tanks and wastewaters), and whether they confer benefits to plants and have in vitro antagonistic potential towards plant pathogens. Microbial diversity and composition was found to be dependent on fish species and sample site. The Tilapia RAS hosted higher bacterial diversity than the Clarias RAS; but the latter hosted higher fungal diversity. Both Tilapia and Clarias RAS hosted bacterial and fungal communities that promoted plant growth, inhibited plant pathogens and encouraged biodegradation. The production of extracellular enzymes, related to nutrient availability and pathogen control, by bacterial strains isolated from the Tilapia and Clarias systems, makes them a promising tool in aquaponics and in their system design.

scholarly journals Root-specific camalexin biosynthesis controls the plant growth-promoting effects of multiple bacterial strains

2019 ◽  
Vol 116 (31) ◽  
pp. 15735-15744 ◽  
Author(s):  
Anna Koprivova ◽  
Stefan Schuck ◽  
Richard P. Jacoby ◽  
Irene Klinkhammer ◽  
Bastian Welter ◽  
...  
Keyword(s):  
Plant Growth ◽  
Growth Promotion ◽  
Bacterial Strains ◽  
Natural Ecosystems ◽  
Promoting Effect ◽  
Gene Encoding ◽  
A Genome ◽  
Sulfatase Activity ◽  
Plant Growth Promoting ◽  
Growth Promoting

Plants in their natural ecosystems interact with numerous microorganisms, but how they influence their microbiota is still elusive. We observed that sulfatase activity in soil, which can be used as a measure of rhizosphere microbial activity, is differently affected by Arabidopsis accessions. Following a genome-wide association analysis of the variation in sulfatase activity we identified a candidate gene encoding an uncharacterized cytochrome P450, CYP71A27. Loss of this gene resulted in 2 different and independent microbiota-specific phenotypes: A lower sulfatase activity in the rhizosphere and a loss of plant growth-promoting effect by Pseudomonas sp. CH267. On the other hand, tolerance to leaf pathogens was not affected, which agreed with prevalent expression of CYP71A27 in the root vasculature. The phenotypes of cyp71A27 mutant were similar to those of cyp71A12 and cyp71A13, known mutants in synthesis of camalexin, a sulfur-containing indolic defense compound. Indeed, the cyp71A27 mutant accumulated less camalexin in the roots upon elicitation with silver nitrate or flagellin. Importantly, addition of camalexin complemented both the sulfatase activity and the loss of plant growth promotion by Pseudomonas sp. CH267. Two alleles of CYP71A27 were identified among Arabidopsis accessions, differing by a substitution of Glu373 by Gln, which correlated with the ability to induce camalexin synthesis and to gain fresh weight in response to Pseudomonas sp. CH267. Thus, CYP71A27 is an additional component in the camalexin synthesis pathway, contributing specifically to the control of plant microbe interactions in the root.

Bidirectional Selection for Nitrogenase Activity and Shoot Dry Weight Among Late Generation Progenies of a Virginia x Spanish Peanut Cross1

1986 ◽  
Vol 13 (2) ◽  
pp. 86-89 ◽  
Author(s):  
S. Arrendell ◽  
J. C. Wynne ◽  
G. H. Elkan ◽  
T. J. Schneeweis
Keyword(s):  
Nitrogen Fixation ◽  
Plant Growth ◽  
Growth Habit ◽  
Nitrogenase Activity ◽  
Dry Weight ◽  
Fruit Weight ◽  
Shoot Dry Weight ◽  
Plant Growth Habit ◽  
The Mean ◽  
Selection For

Abstract Improvement of the host contribution to nitrogen fixation has been proposed as a method of increasing nitrogen fixation. Significant variability and generally high broad-sense heritability estimates (.60 ± .27 to .82 ± .26 for nitrogenase activity and .53 ± .29 to .85 ± .26 for shoot dry weight) have been reported for F2-derived families from a cross between the Virginia (Arachis hypogaea L. ssp. hypogaea var. hypogaea) cultivar NC 6 and the Spanish (ssp. fastigiata Waldron vulgaris Harz.) breeding line 922, indicating selection for increased nigtogen fixation should be effective in this population. Lines from this population were chosen randomly from F2-derived families selected for high and low nitrogenase activity and high and low shoot dry weight after evaluation at three dates and two locations in each of 2 years (F5 and F6 generations). This study's objectives were to evaluate the N2-fixing ability of the selected lines and to evaluate the association between plant growth habit and N2 fixation. Twenty-four lines in each of the four selection groups and the parents, NC 6 and 922, were evaluated at two sampling dates and two locations. Mean nitrogenase activity of lines selected for increased nitrogenase activity was significantly greater than the mean of the lines selected for low nitrogenase activity. Improved nitrogenase activity was associated with increased fruit weight. The fruit weight mean of the group selected for increased fruit weight. The fruit weight mean of the group selected for increased nitrogenase activity was 39% greater than the mean of the group selected for low nitrogenase activity. Mean shoot dry weight of lines selected for increased shoot dry weight was significantly greater than the mean of the lines selected for low shoot dry weight; however, the fruit weight means of these two groups did not differ. It was hypothesized that selection for increased N2 fixation in a population derived from a cross between Virginia and Spanish types would eliminate genotypes with Spanish growth habit. Groups selected for high nitrogenase activity and for high shoot dry weight had longer and wider leaflets, longer cotyledonary laterals and greater main stem height than did their respective low selection groups. However, these traits chosen to characterize plant growth habit were inadequate in discriminating parental growth habits. Consequently, the data neither substantiated nor refuted the hypothesis.

Azospirillum plant growth-promoting strains are nonpathogenic on tomato, pepper, cotton, and wheat

1998 ◽  
Vol 44 (2) ◽  
pp. 168-174 ◽  
Author(s):  
Yoav Bashan
Keyword(s):  
Plant Growth ◽  
Plant Species ◽  
Pseudomonas Syringae ◽  
Xanthomonas Campestris ◽  
Plant Pathogens ◽  
Dry Weight ◽  
Plant Growth Promoting Bacteria ◽  
Disease Symptoms ◽  
Plant Growth Promoting ◽  
Growth Promoting

Six strains of Azospirillum belonging to five species of plant growth-promoting bacteria (A. brasilense, A. lipoferum, A. amazonense, A. irakense, and A. halopraeference) did not cause visible disease symptoms on the roots or leaves of tomato, pepper, cotton, and wheat, failed to inhibit seed germination, and did not reduce plant dry weight when seven standard techniques for the inoculation of plant pathogens were used. Similar inoculation conditions with plant pathogens (Pseudomonas syringae pv. tomato, Xanthomonas campestris pv. vesicatoria, Xanthomonas campestris pv. translucens, and Xanthomonas campestris pv. malvacearum) induced typical disease symptoms. None of Azospirillum strains caused the hypersensitive reaction on eggplant, whereas all pathogens did. All Azospirillum strains increased phytoalexin production in all disease-resistant plant species to moderate levels, but the levels were significantly lower than those induced by the compatible pathogens. The various phytoalexins produced in plants had the capacity to inhibit growth of all Azospirillum strains. Azospirillum amazonense, A. irakense, and A. halopraeference had no apparent effect on plant growth, while A. brasilense and A. lipoferum increased the dry weight of all plant species. Under partial mist conditions, all Azospirillum strains were capable of colonizing leaf surfaces (103-107 cfu/g dry weight) regardless of the plant species. These results provide experimental evidence that Azospirillum sp. might be considered safe for the inoculation of several plant species.Key words: Azospirillum, beneficial bacteria, environmental protection, plant inoculation, plant growth-promoting bacteria.

Effect of soil moisture on nodulation of cowpea and hyacinth bean

1976 ◽  
Vol 86 (3) ◽  
pp. 553-560 ◽  
Author(s):  
H. A. Habish ◽  
A. A. Mahdi
Keyword(s):  
Nitrogen Fixation ◽  
Soil Moisture ◽  
Plant Growth ◽  
Dry Weight ◽  
Field Conditions ◽  
Pot Experiments ◽  
Irrigation Interval ◽  
Dry Conditions ◽  
Hyacinth Bean

SummaryPot experiments in which cowpea and hyacinth bean were grown at 15–45% soil moisture showed that nodulation, nitrogen fixation and plant growth were poor at 15%. The weights of nodules and plants were lower in January (winter) than in June (summer). In June cowpea was more tolerant of dry conditions giving good nodulation at 25–35% whereas hyacinth bean required 35–45%.Under field conditions the number and dry weight of nodules were affected by the irrigation interval whereas plant growth was affected by the amount of water applied. Applying 75 mm depth of water every 7 days gave the best combination of nodulation and plant growth.

Plant growth-promoting bacteria that decrease heavy metal toxicity in plants

2000 ◽  
Vol 46 (3) ◽  
pp. 237-245 ◽  
Author(s):  
Genrich I Burd ◽  
D George Dixon ◽  
Bernard R Glick
Keyword(s):  
Heavy Metal ◽  
Plant Growth ◽  
Indian Mustard ◽  
Dry Weight ◽  
Plant Growth Promoting Bacteria ◽  
Bacterial Strains ◽  
Plant Growth Promoting ◽  
High Concentrations ◽  
Kluyvera Ascorbata ◽  
Nickel Lead

Kluyvera ascorbata SUD165 and a siderophore-overproducing mutant of this bacterium, K. ascorbata SUD165/26, were used to inoculate tomato, canola, and Indian mustard seeds which were then grown in soil for 25-42 days in the presence of either nickel, lead, or zinc. The parameters that were monitored included plant wet and dry weight, protein and chlorophyll content in the plant leaves, and concentration of heavy metal in the plant roots and shoots. As indicated by a decrease in the measured values of these parameters, in all instances, plant growth was inhibited by the presence of the added metal. Both bacterial strains were effective, although not always to a statistically significant extent, at relieving a portion of the growth inhibition caused by the metals. In most cases, the siderophore overproducing mutant K. ascorbata 165/26 exerted a more pronounced effect on plant growth than did the wild-type bacterium K. ascorbata SUD165. The data suggest that the ability of these bacteria to protect plants against the inhibitory effects of high concentrations of nickel, lead, and zinc is related to the bacteria providing the plants with sufficient iron.Key words: phytoremediation, heavy metals, siderophores, Kluyvera ascorbata.

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