The Application of CRISPR/Cas9 Technology for Farm Animals: A Review

Livestock animal are important for agriculture economy and biomedical research. They are sources of Milk, meat, carcass, organic manure and other products. The development of genome editing technologies, especially CRISPR-Cas have revolutionized the generation of gene edited farm animals. In this review, we briefly introduce the CRISPR-Cas9 technology and highlight its application on livestock such as human disease modeling, disease resistant animal, and generation of hornless cattle, animal welfare and other agricultural and biomedical related traits which enhance the livestock production in order to meet the increasing demand of food worldwide. The ability to transfer sperm-producing stem cells or spermatogonial stem cells (SSCs) from a donor animal into the testes of a recipient male could have multiple applications. Production of BLG free milk in cattle provides a promising way to those who have allergy to cow milk. The knockdown of myostatin gene in different species like Sheep, Goat, Cattle and pig is very helpful in the economy of meat industry. Besides the several benefits of CRISPR-Cas9 technology, the risk factors and ethics issues related to this technology should be reconsidered before they enter into CRISPR era.

Multiomic analysis of the Arabian camel (Camelus dromedarius) kidney reveals a role for cholesterol in water conservation

The Arabian camel (Camelus dromedarius) is the most important livestock animal in arid and semi-arid regions and provides basic necessities to millions of people. In the current context of climate change, there is renewed interest in the mechanisms that enable camelids to survive in arid conditions. Recent investigations described genomic signatures revealing evolutionary adaptations to desert environments. We now present a comprehensive catalogue of the transcriptomes and proteomes of the dromedary kidney and describe how gene expression is modulated as a consequence of chronic dehydration and acute rehydration. Our analyses suggested an enrichment of the cholesterol biosynthetic process and an overrepresentation of categories related to ion transport. Thus, we further validated differentially expressed genes with known roles in water conservation which are affected by changes in cholesterol levels. Our datasets suggest that suppression of cholesterol biosynthesis may facilitate water retention in the kidney by indirectly facilitating the AQP2-mediated water reabsorption.

SISTEM HUNIAN MASA DEPAN BERBASIS TEKNOLOGI UNTUK KEBUTUHAN MANUSIA

The Living Bot is a project where future residential buildings will adapt to the times. In the coming year, the human population will continue to grow, so that it will use the land as a place for various needs such as shelter, activities, and other things. Along with this increase in human population, the land will also shrink while the land itself is needed so that humans can meet their food needs either from farming (plants), or through livestock (animal). Therefore, The Living Bot created a system in which human implementation begins to adapt to the life in which they live by implementing a residential system that can produce their own food with plantings that maximize vertical land. This form of shelter can be used as a system so that its application can be carried out. Adaptations that are carried out are by changing the lifestyle of humans to the use of technology. The lifestyle that must adapt is by farming, assisted by A.I. technology. because humans in urban areas do not have a background in growing a food crop. Therefore technology is present in helping urban communities, also assisted by modern planting methods such as using hydroponics, aquaponics, aeroponics, and indoor planting techniques assisted by artificial light such as LEDs. Keywords: Adaptation; Techonology Abstrak The Living Bot merupakan sebuah proyek dimana bangunan hunian pada masa depan akan beradaptasi dengan perkembangan zaman. Pada tahun yang akan datang, populasi manusia akan terus bertambah, sehingga akan menggunakan lahan sebagai tempat untuk berbagai macam kebutuhan seperti tempat tinggal, aktivitas, dan hal lainnya. Seiring dengan pertambahan populasi manusia ini, lahan juga akan semakin menyempit sedangkan lahan sendiri diperlukan agar manusia dapat memenuhi kebutuhan pangannya baik dari hasil bertani (tumbuh-tumbuhan), ataupun melalui peternakan (hewani). Maka dari itu The Living Bot membuat suatu sistem yaitu dimana implementasi manusia mulai beradaptasi dengan kehidupan tempat tinggalnya dengan menerapkan sistem hunian yang dapat menghasilkan makanannya sendiri dengan penanaman-penanaman yang memaksimalkan lahan secara vertikal.Bentuk hunian seperti ini dapat dijadikan sebuah sistem sehingga penerapannya dapat dilakukan di berbagai hunian Adaptasi yang dilakukan adalah dengan mengubah gaya hidup manusia sampai kepada pengunaan teknologi. Adapun gaya hidup yang harus beradaptasi adalah dengan bercocok tanam, dengan dibantu oleh teknologi A.I. karena manusia yang ada di perkotaan tidak memiliki latar belakang dalam menanam sebuah tanaman pangan. Maka dari itu teknologi hadir dalam membantu masyarakat kota, juga dibantu oleh metode menanam yang modern seperti menggunakan hidroponik, akuaponik, aeroponik, dan teknik penanaman indoor yang dibantu oleh cahaya buatan seperti LED.

Analysis of Porcine RIG-I Like Receptors Revealed the Positive Regulation of RIG-I and MDA5 by LGP2

The RLRs play critical roles in sensing and fighting viral infections especially RNA virus infections. Despite the extensive studies on RLRs in humans and mice, there is a lack of systemic investigation of livestock animal RLRs. In this study, we characterized the porcine RLR members RIG-I, MDA5 and LGP2. Compared with their human counterparts, porcine RIG-I and MDA5 exhibited similar signaling activity to distinct dsRNA and viruses, via similar and cooperative recognitions. Porcine LGP2, without signaling activity, was found to positively regulate porcine RIG-I and MDA5 in transfected porcine alveolar macrophages (PAMs), gene knockout PAMs and PK-15 cells. Mechanistically, LGP2 interacts with RIG-I and MDA5 upon cell activation, and promotes the binding of dsRNA ligand by MDA5 as well as RIG-I. Accordingly, porcine LGP2 exerted broad antiviral functions. Intriguingly, we found that porcine LGP2 mutants with defects in ATPase and/or dsRNA binding present constitutive activity which are likely through RIG-I and MDA5. Our work provided significant insights into porcine innate immunity, species specificity and immune biology.

Clostridia in Insect Processed Animal Proteins—Is an Epidemiological Problem Possible?

The aim of this study was the evaluation of the insect processed animal protein (IPAP) contamination level by Clostridium spp. Particularly, we screened for the occurrence of pathogenic species of Clostridia. The samples of IPAP were derived from yellow mealworm (Tenebrio molitor) and black soldier fly (Hermetia illucens) available in the Polish market. The IPAPs were added to experimental feeds for poultry. The differences between the contamination levels of the control (without the addition of IPAP) and experimental (with the addition of IPAP) groups were monitored. The samples were also examined by culture and PCR-based methods to detect 16S rDNA and genes determining botulinum toxin (BoNT) production. Statistical significance was noticed among the feed with the IPAP addition, as well as an increase of contamination by Clostridium spp. In one sample of IPAP, the occurrence of ntnh and bont/D genes determining the production of BoNT/D was noticed. However, a positive result was noticed only at the step of the liquid culture; the Clostridium botulinum type D strain was not isolated. Phenotypically, and according to the 16S rDNA analysis, genetically similar strains to C. botulinum species were isolated. Considering the microbiological safety of IPAP and expanding possibility of its use in livestock animal feed, it seems to be reasonable to provide complex risk assessment on the potential transfer of Clostridia into feed compounds, to assure the safety and sustainable development of insect PAP industry.

Exploring Potential Bioactive Peptides in Fermented Bactrian Camel’s Milk and Mare’s Milk Made by Mongolian Nomads

To date, bioactive proteins and peptides from minor livestock milks and their fermented products have been scarcely reported. In Mongolia, nomads are commonly rearing five livestock animal species (i.e., cow, camel, goat, horse, and sheep) for milking and other purposes. In this study, we analyzed the peptide composition in fermented milks of Bactrian camels (Camelus bactrianus) and horses, produced by Mongolian nomads for self-consumption. Peptides from skimmed fermented milks were separated by ultrafiltration and reverse-phase high-performance liquid chromatography. Then, their amino acid sequences were determined by matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry. Consequently, eleven peptides were identified in the fermented camel’s milk including four from β-casein (β-CN), three from αs1-CN, and two from both κ-CN and lactophorin. On the other hand, twenty-four peptides were identified in the fermented mare’s milk including nineteen from β-CN, three from αs1-CN, and one from both κ-CN and αs2-CN. According to previous reports on the bioactivities of milk-derived peptides, antibacterial and antihypertensive activities were promising in both the fermented camel’s milk and mare’s milk. In addition, potential antioxidant activity was conjectured in the fermented camel’s milk. Further investigations are currently needed to clarify the potential role of immunomodulatory peptides in the two fermented milks.

Genomic Analyses Reveal Distinct Genetic Architectures and Selective Pressures in Chinese Donkeys

BackgroundDonkey (Equus asinus) is an important livestock animal in China because of its nourishment and medical value. After a long period of natural and artificial selection, the variety diversity and phenotype of donkey are very rich. However, due to the lack of genome-wide studies, its genomic value remains unclear.ResultsWe clarified the genetic and demographic characteristics of Chinese donkeys and the selective pressures on them by analyzing 78 whole genomes from 12 breeds. We found that Gunsha donkey had the lowest nucleotide diversity, longest length, and largest number of runs of homozygosity. Phylogenetic analysis revealed obvious geographical distribution trends in Chinese donkeys. In selective sweep, gene annotation, functional enrichment, and differential expression analyses between large and small body donkey groups, we identified selective signals, including NCAPG and LCORL, to be related to rapid growth and large body size.ConclusionOur findings improve the understanding of the evolutionary history and formation of different donkey breeds and provide theoretical insights into the genetic mechanism underlying breed characteristics and molecular breeding programs of donkey clades.

Seroprevalence of Brucellosis among General Population in Famenin City, Western Iran in 2016: The Famenin Brucellosis Cohort Study

Background: Brucellosis is endemic in Iran with a higher level of endemicity in western areas, including the Hamadan province. This study aims to define the seroprevalence of brucellosis and it,s risk factors in general the population of Famenin, Hamadan province, in western Iran. Methods: This survey was conducted on 2367 participants in Famenin and its villages from September to November 2016. After receiving written consent from subjects, demographic information was obtained through questionnaires and 10cc blood samples were taken from the participants. Blood samples were sent to the Core facility of Hamadan University of Medical Sciences and were tested using Wright and 2ME kits (Pasteur Institute, Iran) for serological detection of brucellosis. The seroprevalence of brucellosis was reported as percentage with 95% confidence interval (CI). Results: Totally, 2367 individuals with the mean age (SD) of 34.6 (20.9) (range: 2 to 95) years were enrolled. Of these, 1060 (44.8%) were men and 1610 (68.0%) lived in rural areas. The seroprevalence of brucellosis according to the Wright titer (equal to or greater than 1:80) was 6.6% (95% CI: 5.62%, 7.66%). The corresponding prevalence based on 2ME titers (equal to or greater than 1:40) in subjects with positive Wright test was 37.2% (95% CI: 29.5%, 44.84%). We saw a significant association between the incidence of brucellosis and occupation (P < 0.001) and type of contact with livestock (P = 0.009) as two important risk factors. Conclusion: The seroprevalence of brucellosis in Famenin population was considerable. Contact with livestock, animal husbandry, farming and history of brucellosis were risk factors for brucellosis infection.

Stomoxys calcitrans (Diptera: Muscidae): Value for Veterinary Medicine. Review

The purpose of the research is analysis and compilation of literature data on involvement of the stable fly Stomoxys calcitrans in the spread of livestock animal pathogens. Materials and methods. We have analyzed literature data from foreign sources over the past 30 years, which are indexed in the PubMed, Crossref, Web of Science and Scopus databases, about S. calcitrans as a potential vector of livestock animal pathogens. Results and discussion. A literature review is presented on assessment of economic impact by the stable fly S. calcitrans on animal husbandry, as well as possible involvement of the S. calcitrans imago in the transmission of viruses, bacteria, protozoa and helminths which are animal pathogens.

IMMUNOHISTOCHEMICAL CHARACTERISATION OF LYMPHOID POPULATIONS IN RABBIT JEJUNAL PEYER’S PATCH

Rabbits are an important livestock animal species, which are used for their meat and fur. Nowadays they are also becoming more popular as pets. Furthermore, rabbits are commonly used in research, inter alia in immunological studies and for studying pathogenesis of human and animal diseases. The lymphoid tissue is abundant in the rabbit intestine and a lot of it is concentrated in Peyer's patches, the majority of which is located in the jejunum. Understanding of the rabbit Peyer's patches functions is essential for the prevention and treatment of their diseases. In order to enhance it, accurate knowledge of its lymphocyte population composition is needed. At present, the cellular composition of the rabbit gut-associated lymphoid tissue remains insufficiently studied. Therefore, the aim of our study was to establish the content and localization of lymphoid populations in the domestic rabbit jejunal Peyer’s patches. We performed immunohistochemical studies using monoclonal antibodies CD3, CD10 and CD20 (DAKO, Denmark) to identify the distribution of lymphoid populations in jejunal Peyer's patches of a mature domestic rabbit. The results, obtained in our study, complement the existing data and determine the main lymphoid populations in the rabbit jejunal Peyer's patches. The presented data are fundamental for further studies of the rabbit gut-associated lymphoid tissue. We found that lymphoid nodules of jejunal Peyer's patches contains a predominant CD20+ cell population (B cells). It also contains many CD10+ cells (precursors of T cells and B cells), which are mostly concentrated in the germinal centers of lymphoid nodules. In the diffuse form of the lymphoid tissue the vast majority of cells are CD3+ cells (T cells)