Weed Problems in Uruguayan Agriculture: Evolution and Current Situation

Uruguayan agriculture has undergone dramatic changes in the last 50 years driven by the adoption of new agricultural production systems that incorporate zero tillage and herbicide resistant crops. This has resulted in a shift in weed species frequencies and the dispersion of introduced herbicide resistant weed populations. Finally, integrated weed management tools are being developed by research and extension services to manage herbicide-resistant (HR) weeds better and to reduce environmental impact of herbicides.

Sexual conflict promotes species coexistence through negative frequency dependence

A major challenge in community ecology is to understand the mechanisms promoting stable local coexistence. A necessary feature of local coexistence is that species show negative frequency dependence, rescuing rare species from exclusion. However, most studies have focused on ecological differences driving negative frequency dependence, ignoring non-ecological mechanisms such as reproductive interactions. Here, we combined field studies with behavioural and mesocosm experiments to investigate how reproductive interactions within and between species promote coexistence. Our results indicate that the intensity of male mating harassment and sexual conflict increases as species become more common, reducing female productivity and leading to negative frequency dependence. Moreover, field surveys reveal that negative frequency dependence operates in natural settings, consistent with our experimental results. These results suggest that sexual conflict can promote local coexistence and highlights the importance of studying reproductive interactions together with ecological differences to better understand the mechanisms promoting species coexistence.Significance statementResearch on the mechanisms promoting local species coexistence have focused on canonical ecological differences that increase intraspecific over interspecific competition. However, one intrinsic factor of species that can promote coexistence are the reproductive interactions. We performed a series of behavioural and mesocosm experiments manipulating species frequencies together with field observations and show that sexual conflict can decrease female fitness when species are common and promote local coexistence. Our results suggest that reproductive interactions are an understudied mechanism that can promote species coexistence even when species are ecologically equivalent.

Shelled-Molluscs Fauna at Abrolhos Bank (Brazil): Assessment of Both Total Species Richness and the Completed Distribution of Species Frequencies by Numerical Extrapolation of a Partial Survey

Numerous anthropogenic threats to the exceptionally rich coral-reef ecosystem at Abrolhos Bank (Brazil) arguably require implementing drastic conservation policy and meanwhile, urge for the prior detailed assessment of species richness and the species distribution across the Bank. Due to their unavoidable incompleteness, the already implemented “Rapid Assessment Surveys” at Abrolhos Bank deserve being completed, at least numerically, by implementing an appropriate extrapolation procedure, to avoid serious bias precisely due to ignoring both the number and the frequency distribution of those species still remaining undetected after Rapid Assessment Surveys. Complying with this concern, I report on the results of a numerical extrapolation of a previously achieved partial survey of the soft-bottom shelled-mollusc fauna at Abrolhos Bank. This numerical extrapolation provides least-biased estimates regarding not only the number of species which have remained unrecorded but, moreover, additional information on the respective frequencies of these still unrecorded species. As a result, the extrapolated total species richness at Abrolhos Bank reaches at least 435 shelled-molluscs species (instead of only 293 species actually recorded by the Rapid Assessment Survey), out of which 30 species (instead of 19) are expected to be Brazilian endemics. Accordingly, the soft-bottom shelled-mollusc fauna – an admittedly fairly reliable indicator for the whole marine biodiversity – definitely demonstrate the major biological interest of the whole reef ecosystem at Abrolhos Bank and the imperative necessity of implementing truly efficient conservation programs of this ecosystem.

Structural changes in bird communities before and after coppice management practices: a comparison using a diversity/dominance approach

We report data on the effects of coppice management on breeding birds in paired oak woods of central Italy using a Before-After-Control-Impact sampling design, hypothesizing that this practice strongly affect abundance, richness and diversity at community level. Using point count method, we obtained first evidence of a coppice management effect acting as a stressor on the breeding bird assemblage structure. We observed a significant decrease in averaged species richness and abundance in coppiced areas before and after the coppicing practices, differently from the control area. Analogously, regression lines derived by species frequencies in diversity/dominance diagrams showed a different trends when comparing the coppiced areas before and after the cutting, indicating a stress in the latter. This pattern is supported by the H’ diversity and evenness values that changed abruptly between years only in the coppiced area. These changes can be related to the significant reduction in tree plant density before and after cutting, especially for those with a diameter between 7.5 and 23 cm.

A framework for estimating the effects of sequential reproductive barriers: implementation using Bayesian models with field data from cryptic species

Determining how reproductive barriers modulate gene flow between populations represents a major step towards understanding the factors shaping the course of speciation. Although many indices quantifying reproductive isolation (RI) have been proposed, they do not permit the quantification of cross direction-specific RI under varying species frequencies and over arbitrary sequences of barriers. Furthermore, techniques quantifying associated uncertainties are lacking, and statistical methods unrelated to biological process are still preferred for obtaining confidence intervals and p-values. To address these shortcomings, we provide new RI indices that model changes in gene flow for both directions of hybridization, and we implement them in a Bayesian model. We use this model to quantify RI between two species of the psyllid Cacopsylla pruni based on field genotypic data for mating individuals, inseminated spermatophores and progeny. The results showed that pre-insemination isolation was strong, mildly asymmetric and undistinguishably different between study sites despite large differences in species frequencies; that post-insemination isolation strongly affected the more common hybrid type; and that cumulative isolation was close to complete. In the light of these results, we discuss how these developments can strengthen comparative RI studies.Author contributionsJP and NS initiated the study and obtained biological data. JP and DRJP developed the porosity-based approach. DRJP conceived the Bayesian implementation and code. JP, DRJP and NS wrote the manuscript.Data availabilityMitochondrial sequence data will be available at Genbank, source code is available at xxx.

Changes in alpine vegetation over 50 years in the Western Tatras (Slovakia)

This paper examines changes in alpine vegetation over 50 years in the Western Tatras part of the Western Carpathians Mountains in Slovakia. We focus on the following most widespread vegetation types: subalpine to subnival grasslands (alliance Juncion trifidi Krajina 1933), snowbed vegetation (alliance Festucion picturatae Krajina 1933) and dwarf-shrub vegetation (alliances Loiseleurio-Vaccinion Br.-Bl. in Br.-Bl. et Jenny 1926 and Vaccinion myrtilli Krajina 1933). The historical 1971–1977 sampling dataset was re-sampled in 2016–2017 and our research is based on a comparison of 40 pairs of these relevés. Herein, we studied (i) changes in species frequencies; (ii) changes in phytodiversity and site conditions using estimates of Ellenberg’s eco-indices and (iii) comparison of historical and current relevés over time using the nonmetric multidimensional scaling gradient analysis (NMDS) ordination method. The frequency curves reveal differences; especially in the most frequent species at 37.5−80%, which reach higher values in the current data. The higher 7.5−25% value of medium-frequent species in the historical relevés indicates progressive homogenisation of the examined vegetation. In addition, the Shannon-Wiener index of individual vegetation types revealed no significant differences in diversity or average number of species. The historical relevés included 75 species while 74 were confirmed in the current data. Statistically significant differences were determined in light factor for all three vegetation groups. This was due to the retreat of some light-demanding species. While NMDS indicated changes in Festucion and Vaccinion relevés over time, the Juncion group relevés did not follow this trend, thus confirming their high stability. The observed changes between current and historical data are attributed to changes in climate and altered land use with the cessation of grazing.

Distribution and Biomass Allocation in Relation to Depth of Flowering Rush (Butomus umbellatus) in the Detroit Lakes, Minnesota

The Detroit Lakes chain of lakes consists of five basins in northwest Minnesota adjacent to the town of Detroit Lakes. Flowering rush has been established in these basins since the 1960s. We evaluated the distribution of flowering rush in the five basins using a point intercept method, with 830 points distributed in a grid with points 150 m apart. These data were analyzed to determine whether invasive and native species frequencies were different between 2010 and 2011. We also assessed co-occurrence of flowering rush with native hardstem bulrush. The distribution of both flowering rush and hardstem bulrush was unchanged from 2010 to 2011. Flowering rush is invading areas with native plants and not establishing in unvegetated areas. Although flowering rush is found as deep as 4.5 m, it is most frequent at a depth of 1.3 m. We also examined the distribution of biomass and growth across a depth gradient from 0.3 to 3.0 m in 0.3-m intervals. At each 0.3-m interval, three biomass samples were collected at each of 10 transects for a total of 30 samples per depth interval or 300 biomass samples. At each point, leaf height, emergent leaf height, water depth, number of ramets, and number of rhizome buds were counted. Biomass samples were collected in a 0.018-m2 core sampler, sorted to shoots and belowground biomass. We found that flowering rush height and biomass peaked at 1.3 m and declined with greater depth. Bud density was negatively related to water depth. Bud density averaged 300 buds m–2, which was three times the average ramet density (100 ramets m–2).

Testing seed-size predictions in Mediterranean annual grasslands

On the basis of previous research, we predict that Mediterranean grasslands should show larger-seeded annuals in: (1) more-arid grasslands; (2) more-fertile soils; (3) less-grazed grasslands; and (4) grasslands with lower intensities of seed predation by ants. To test these predictions, we set 29 sampling units of 50 m × 50 m in a 1000 km2 grassland area in Central Spain, and characterized them according to the former factors. We then recorded annual vegetation using ten quadrats of 20 cm × 20 cm in each sampling unit. Seed size at the community level was described using six variables: (1) mean seed mass; (2) standard deviation of seed mass; (3) weighted mean seed mass (by species frequencies); (4) proportion of small-seeded annuals; (5) proportion of medium-seeded annuals; and (6) proportion of large-seeded annuals. Most climate variables (mean annual temperature, length of the summer drought, water balance and mean annual precipitation) correlated with seed-size descriptors, showing that large-seeded annuals increase in warmer and more-arid communities. Mean seed size was modelled as a function of mean annual temperature and grazing pressure. According to this model, warmer and less-grazed communities tend to show a smaller mean seed size. These results confirm the importance of seed-size descriptors at the community level in Mediterranean grasslands, and the role of climate and grazing as major drivers in these communities. Conversely, hypotheses about soil fertility and seed predation by ants were not supported by our results.

Persistence of ground-layer bryophytes in a structural retention experiment: initial effects of level and pattern of overstory retention

We examined first-year responses of forest-floor bryophytes to structural retention harvests at four locations in western Washington. Treatments represented a range of retention levels (100%, 75%, 40%, and 15% of original basal area) and spatial patterns (dispersed vs. aggregated in 1 ha patches). Declines in bryophyte cover and species' frequencies were comparably large at 40% and 15% retention. Retention pattern had little effect on the magnitude of decline, although declines in richness tended to be greater in aggregated treatments. Changes in cover were small within forest aggregates (comparable to controls). However, richness declined relative to controls within aggregates at 15% retention; rarer taxa in these exposed patches may be susceptible to edge effects. Declines in species' frequencies and richness were consistently greater in "clear-cut" areas of aggregated treatments than in dispersed retention; liverworts were particularly sensitive to harvest. In cut areas, bryophytes responded positively to cover of understory vegetation and negatively to logging slash. The positive correlation of richness (but not cover) to tree basal area may reflect the contribution of tree boles to persistence of rarer corticolous species. Our results suggest that conservation of bryophytes in forests managed with structural retention will require large retention patches and dispersed trees at levels considerably higher than current retention standards.

Impacts of tree invasion on floristic composition of subtropical grasslands on the Bunya Mountains, Australia

The effect of ongoing forest invasion on floristic composition of subtropical montane grasslands was considered by examining vascular plant species frequencies across 13 adjoining areas of grassland, invaded grassland (eucalypt forest <50 years old) and eucalypt forest (>50 years old) on the Bunya Mountains in subtropical eastern Australia. Tree invasion of grasslands over the last 50 years has had substantial facilitative or antagonistic net impacts on populations of many plant species. Increases in species frequency, indicating net facilitation, generally appear to occur earlier in forest development than do decreases in frequency, indicative of net antagonism. Although more than 20% of the flora showed substantial association with either grassland or forest, the dominant ground-stratum species in each habitat were quite similar and very few grassland species were not recorded in grassy forests. Forb species composition appears to change more rapidly after tree invasion than grass species composition. Relatively few forbs preferred forest to grassland, whereas shrubs, trees or lianes were substantially more frequent in forests. Replacement of grasslands by grassy forests would reduce landscape diversity and impact on other values in the Bunya Mountains. However, this study suggests that most, if not all, vascular plants that currently occur on the grasslands will persist in the area provided the grassy character of the eucalypt forests is maintained.