systematic relationships
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2021 ◽  
Vol 28 (2) ◽  
pp. 385-393
Author(s):  
Luluah M Al Masoudi ◽  
Najat A Bukhari ◽  
Mona Al Whibi

The seed macro- and micro-morphological characters of 13 species belonging to three genera; Kickxia Dumort, Scrophularia L. and Plantago L., collected from different localities of Saudi Arabia, were studied using a Stereomicroscope and Scanning Electron Microscope for evaluating their taxonomic relationships. Three macro-morphological characters of seeds were shape, size, and color while three diagnostic micromorphological characters were seed coat sculpture, the anticlinal and periclinal wall., The seed shape seems to be specific in Plantago L. (peltate, angled) than the two other genera while the color and seed size show little importance. The Plantago L. has a specific rugose sculpture while the other two genera have either tuberculate or alveolate. So Plantago L. was possessed no affinities to Kickxia Dumor or Scrophularia L.. This observation gives extra support to the earlier taxonomic views that suggested the retention of two genera in the traditional family Scrophulariaceae and maintaining Plantago L. in a separate monogeneric family Plantaginaceae Detailed analysis of seed characters of more species is needed to clarify the systematic relationships between the three genera. A key to the identification of studied species based on seed micro- and macro-morphological characters is provide. Bangladesh J. Plant Taxon. 28(2): 385-393, 2021 (December)


2021 ◽  
Vol 3 (4) ◽  
Author(s):  
Ruben Cabrera ◽  
Jhoana Díaz-Larrea ◽  
Arsenio J. Areces ◽  
Laura Nuñez García ◽  
J. RicardoJ. Ricardo Cruz-Aviña ◽  
...  

Recent advances in molecular biology make it possible to sequence not only genes or genomes, but also to understand codon dynamics. For the organelle genes of these organisms, a small set of preferred codons are used for encoding proteins. For the first time, this paper treats the divergence of synonymous codon usage and its bias in the rbcL gene within the Laurencia complex of red algae. We observed that the synonymous codon preference biases in rbcL are large and differ among species. A clear distinction in codon usage between genera is evident: the genera Dasya and Delesseria use a set that fluctuated between 53 and 58 codons. Whereas, in the genera Ceramium, Chondrophycus, Chlamydomonas, Chlorella, Laurencia s.s, Osmundea, and Palisada codon usage indicates a higher restriction fluctuating between 40 to 51 codons. Laurencia complex genera and other representative algae showed a defined composition pattern, with lower percentage values of NNC/G (7-24.9%). Dasya and Delesseria showed a selective pattern tendency because of high percentage values of NNC/G (54-55%). The estimated codon bias parameters were tested to infer systematic relationships and match suitable codons with the NNC / G codon percentages. Cluster analysis based on Codon Usage supports phylogenetic relationships between Chondrophycus, Palisada, Laurencia, Osmundea, and Yuzurua species.


2021 ◽  
Author(s):  
Chandrakant Jadhav ◽  
Gulab Khedkar ◽  
CD Khedkar ◽  
Bharathi Prakash ◽  
Sanil Pillai

Abstract The Gangetic dolphin, P. gangetica, is one of the oldest known creatures, and its taxonomic status has been debated for over two centuries with no agreement. The clarification of the systematic relationships of Platanista taxa has been listed as among the highest priority for all cetaceans. Of the several taxonomic schemes proposed, all have been very limited and do not provide sufficient weight of evidence to defend any taxonomic classification. Consequently, to resolve this case, a new mitochondrial genome record for P. gangetica gangetica was created for quantitative evaluation of the Ganges and Indus River dolphin populations to estimate species boundaries. This has aided in the resolution of the taxonomic status of the Gangetic dolphin, P. gangetica by showing that the subspecies P. gangetica gangetica and P. gangetica minor are indistinguishable based on the molecular differences and do not follow the standards for molecular species boundaries. Also geographic historical reviews show that these two populations were one during the Miocene era, and that segregation occurred during the geosyncline effect of the Bay of Bengal. However, with the present set of evidences, we propose to abandon the subspecies hypothesis for these P. gangetica taxa.


PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11805
Author(s):  
Eduardo Ascarrunz ◽  
Julien Claude ◽  
Walter G. Joyce

The geoemydid turtles of the Eocoene Messel Pit Quarry of Hesse, Germany, are part of a rich Western European fossil record of testudinoids. Originally referred to as “Ocadia” kehreri and “Ocadia” messeliana, their systematic relationships remain unclear. A previous study proposed that a majority of the Western European geoemydids, including the Messel geoemydids, are closely related to the Recent European representatives of the clade Mauremys. Another study hypothesised that the Western European geoemydid fauna is more phylogenetically diverse, and that the Messel geoemydids are closely related to the East Asian turtles Orlitia and Malayemys. Here we present the first quantitative analyses to date that investigate this question. We use continuous characters in the form of ratios to estimate the placement of the Messel geoemydids in a reference tree that was estimated from molecular data. We explore the placement error obtained from that data with maximum likelihood and Bayesian methods, as well as linear parsimony in combination with discrete characters. We find good overall performance with Bayesian and parsimony analyses. Parsimony performs even better when we also incorporated discrete characters. Yet, we cannot pin down the position of the Messel geoemydids with high confidence. Depending on how intraspecific variation of the ratio characters is treated, parsimony favours a placement of the Messel fossils sister to Orlitia borneensis or sister to Geoemyda spengleri, with weak bootstrap support. The latter placement is suspect because G. spengleri is a phylogenetically problematic species with molecular and morphological data. There is even less support for placements within the Mauremys clade.


Zootaxa ◽  
2021 ◽  
Vol 5004 (2) ◽  
pp. 370-384
Author(s):  
GUSTAVO BORGES FERRO ◽  
JEFFREY H. SKEVINGTON ◽  
STEPHEN A. MARSHALL ◽  
SCOTT KELSO

A molecular phylogeny for the Taeniapterinae is presented based on mitochondrial (cytochrome c oxidase subunit I, COI), ribosomal (16S rRNA and 28S rRNA) and nuclear (EF-1α and CAD) genes of 48 specimens including 40 species. Maximum likelihood and Bayesian inference were used to analyze the total concatenated dataset of 8769 bp. The results confirm that tribal classifications in Taeniapterinae are artificial and support the separation of Paragrallomyia Hendel and Taeniaptera sensu Ferro & Marshall (2020).


Zootaxa ◽  
2021 ◽  
Vol 4975 (1) ◽  
pp. 176-186
Author(s):  
BLANCA HUERTAS ◽  
CARLOS PRIETO ◽  
FREDY MONTERO ◽  
MIKE ADAMS ◽  
JEAN FRANÇOIS LE CROM ◽  
...  

Catasticta lycurgus is a striking endemic butterfly, restricted to high elevation habitats in the Sierra Nevada de Santa Marta, an isolated mountain range separate from the Andes in the north of Colombia. The type, which for almost a hundred years was the only known specimen, was collected in 1878 by Frederick Simons in the vicinity of Atánquez and was sent to the UK to be described by renowned naturalists Godman and Salvin in 1880. In 1972, explorers Adams and Bernard collected a second specimen of C. lycurgus in the locality of San Pedro at 2,900m of elevation in the Sierra Nevada de Santa Marta. These two specimens were the only known ones for many decades until recently, when Colombian entomologists found the species again in San Pedro de la Sierra and later, when a female was discovered in 2013. Here, we report the rediscovery of this rare and charismatic species, with new specimens collected near the type locality, which have not been reported previously. The female of C. lycurgus is described and illustrated for the first time as well the male genitalia of this species. We combine all information available to provide some insights on the systematic relationships of this species within the genus Catasticta Butler, discuss its distribution and provide a preliminary conservation assessment. Despite the newly collected specimens, the species remains very rare in the field and in collections. 


Linguistics ◽  
2021 ◽  
Vol 0 (0) ◽  
Author(s):  
Shigeto Kawahara ◽  
Jeff Moore

Abstract This paper contributes to the studies of sound symbolism, systematic relationships between sounds and meanings. Specifically, we build on a series of studies conducted within a research paradigm called “Pokémonastics,” which uses the Pokémon universe to explore sound symbolic patterns. Inspired by a study of existing English Pokémon names, two experiments were conducted in which English speakers were provided with pairs of pre-evolution and post-evolution Pokémon characters, the latter of which were larger. The participants were given two name choices whose members were systematically different in some phonological properties. The results show the following sound symbolic patterns to be productive: (1) names with higher segment counts are more likely to be associated with post-evolution characters than names with lower segment counts, (2) names containing [a] are more likely to be associated with post-evolution characters than names containing [i], (3) names containing [u] are more likely to be associated with post-evolution characters than names containing [i], and (4) names containing coronal consonants are more likely to be associated with post-evolution characters than names containing labial consonants. Overall, the current results suggest that phonological considerations come into play when English speakers name new fictional creatures. Implications of the current results for the theories of sound symbolism are discussed throughout the paper.


2021 ◽  
Author(s):  
Olaf Werner ◽  
María José Vicente ◽  
Mayra Aguado ◽  
Jesús Robles ◽  
Rosa María Ros

Abstract Cistus heterophyllus subsp. carthaginensis is a critically endangered plant taxon from E Spain. Only two populations, one in La Pobla de Vallbona, Valencian Community (consisting of only one plant) and the other in Llano de Beal, Cartagena municipality, Autonomous Community of the Region of Murcia, are presently known. The low number of individuals and introgression by the closely related C. albidus are the major threats to the conservation of Cistus heterophyllus subsp. carthaginensis. In the years 2007, 2008, 2011, and 2013 seeds were collected from the Murcia population within the efforts to protect this taxon. In this work, we compare the natural population of Murcia with the ex situ plants originated from the recollected seeds, the only known sample from Valencia, and a specimen of North Africa of C. heterophyllus using genotyping by sequencing. The natural population of Murcia shows clear signals of introgression by C. albidus while the ex situ plants are much less affected, suggesting that the major part of the introgression of the natural populations took place after the specimens for the ex situ collection were taken. The Murcian samples seem not to be very close to the Valencian plant, but the systematic relationships among the studied populations remain unclear. The ex situ conservation efforts are a key to the conservation of this taxon.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Sebastian Schindler ◽  
Jan Querengässer ◽  
Maximilian Bruchmann ◽  
Nele Johanna Bögemann ◽  
Robert Moeck ◽  
...  

AbstractExamining personality traits as predictors of human behaviour is of high interest. There are several but inconclusive reported relationships of personality and the susceptibility to the “anchoring effect”, a tendency to adjust estimates towards a given anchor. To provide an answer to variably reported links between personality traits and the anchoring effect, we collected data from 1000 participants in the lab and validated typical anchoring effects and representative personality scores of the sample. Using Bayesian statistical data analyses, we found evidence for the absence of a relationship between anchoring effects and personality scores. We, therefore, conclude that there are no specific personality traits that relate to a higher susceptibility to the anchoring effect. The lack of a relationship between personality and the susceptibility to the anchoring effect might be due to the specific anchoring design, be limited to specific cognitive domains, or the susceptibility to anchors might reflect no reliable individual cognitive phenomena. In the next step, studies should examine the reliability of anchoring effects on the individual level, and testing relationships of individual traits and anchoring effects for other types of anchors, anchoring designs, or cognitive domains.


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