scholarly journals Development of the PARMS marker of the TAC1 gene and its utilization in rice plant architecture breeding

Euphytica ◽  
2021 ◽  
Vol 217 (3) ◽  
Author(s):  
Ju Gao ◽  
Haifu Liang ◽  
Juan Huang ◽  
Dongjin Qing ◽  
Hao Wu ◽  
...  

AbstractThe ideal plant architecture is a new strategy for super high yield breeding of rice. Tiller angle is an important plant architecture character of rice. A reasonable tiller angle is a key factor for the ideal plant architecture and achieving high-yield breeding. Molecular design breeding is the most potential new direction of crop breeding in the future. The development of accurate and efficient functional molecular markers of target trait genes is crucial for molecular design breeding. The TAC1 (Tiller Angle Controlling) gene is the primary gene that regulates tiller angle in rice. This gene can be used to improve the compact plant architecture of indica and japonica rice varieties. The SNP variation from A to G at the fourth intron 3′ splicing point in TAC1 changes plant architecture. Based on the SNP variation, PM-TAC1 was successfully developed as a fluorescent functional molecular marker, via the penta-primer amplification refractory mutation system. Ninety-three rice materials were genotyped using this marker, and the marker was effectively used in rice plant architecture breeding. The successful development of this marker will contribute to the molecular breeding of rice plant architecture.

2018 ◽  
Vol 63 (14) ◽  
pp. 1275-1289 ◽  
Author(s):  
Mingjiang Chen ◽  
Hong Yu ◽  
Jiayang Li ◽  
Guifu Liu ◽  
Bing Wang

2021 ◽  
Vol 13 (18) ◽  
pp. 10284
Author(s):  
Juan Yan ◽  
Xiaoju Chen ◽  
Tonggui Zhu ◽  
Zhongping Zhang ◽  
Jianbo Fan

In this study, three japonica rice varieties—Nanjing 9108, Jiahua 1 and Wuyunjing 29—were supplied with different levels of nano-foliar selenium fertilizers (0, 40 and 80 kg Se ha−1) under field conditions. Their rice yield and absorption, accumulation, transportation and utilization of selenium were studied to find suitable selenium-rich rice cultivars and optimal selenium supply levels, while providing references for the development of selenium-rich rice. On an average basis, the Nanjing 9108, Jiahua 1 and Wuyunjing 29 yielded 8755 ± 190, 8200 ± 317 and 9098 ± 72.7 kg ha−1, respectively. The selenium content in polished rice of the three rice varieties is between 0.210 and 0.933 mg kg−1. When 40 g Se ha−1 nano-selenium fertilizer was used, the selenium accumulation in the shoots of Nanjing 9108, Jiahua 1 and Wuyunjing 29 was, respectively, 11.4 g Se ha−1, 12.3 g Se ha−1 and 12.2 g Se ha−1, and when 80 g Se ha−1 selenium fertilizer was applied, the total selenium accumulation of three rice varieties was, respectively, 2.45, 1.75 and 2.40 times that of 40 g Se ha−1 selenium fertilizer. No evident diversity was observed in the selenium transport coefficient and the apparent utilization rate of selenium among the three varieties. The three rice varieties in this experiment had a strong selenium enrichment capacity, and they could be planted as selenium-enriched and high-yield rice varieties. Further, the amount of selenium fertilizer should not exceed 40 g Se ha−1.


Author(s):  
Mo Zhu ◽  
Yanjuan Hu ◽  
Aizi Tong ◽  
Bowen Yan ◽  
Yanpeng Lv ◽  
...  

Abstract Tiller angle is a key factor determining rice plant architecture, planting density, light interception, photosynthetic efficiency, disease resistance, and grain yield. However, the mechanisms underlying tiller angle control are far from clear. In this study, we identified a mutant, termed bta1–1, with an enlarged tiller angle throughout its life cycle. A detailed analysis reveals that BTA1 has multiple functions because tiller angle, shoot gravitropism, and tolerance to drought stress are changed in bta1–1 plants. Moreover, BTA1 is a positive regulator of shoot gravitropism in rice. Shoot responses to gravistimulation are disrupted in bta1-1 under both light and dark conditions. Gene cloning reveals that bta1-1 is a novel mutant allele of LA1 renamed la1-SN. LA1 is able to rescue the tiller angle and shoot gravitropism defects observed in la1-SN. The nuclear localization signal of LA1 is disrupted by la1-SN, causing changes of its subcellular localization. LA1 is required to regulate the expression of auxin transporters and signaling factors that control shoot gravitropism and tiller angle. High-throughput mRNA sequencing is performed to elucidate the molecular and cellular functions of LA1. The results show that LA1 may be involved in the nucleosome and chromatin assembly, and protein-DNA interactions to control gene expression, shoot gravitropism, and tiller angle. Our results provide new insight into the mechanisms whereby LA1 controls shoot gravitropism and tiller angle in rice.


2019 ◽  
Vol 18 (1) ◽  
pp. 119-128 ◽  
Author(s):  
Yujia Leng ◽  
Yihong Gao ◽  
Long Chen ◽  
Yaolong Yang ◽  
Lichao Huang ◽  
...  

2021 ◽  
Vol 13 (15) ◽  
pp. 8247
Author(s):  
Dimitrios N. Vlachostergios ◽  
Christos Noulas ◽  
Anastasia Kargiotidou ◽  
Dimitrios Baxevanos ◽  
Evangelia Tigka ◽  
...  

Lentil is a versatile and profitable pulse crop with high nutritional food and feed values. The objectives of the study were to determine suitable locations for high yield and quality in terms of production and/or breeding, and to identify promising genotypes. For this reason, five lentil genotypes were evaluated in a multi-location network consisting of ten diverse sites for two consecutive growing seasons, for seed yield (SY), other agronomic traits, crude protein (CP), cooking time (CT) and crude protein yield (CPY). A significant diversification and specialization of the locations was identified with regards to SY, CP, CT and CPY. Different locations showed optimal values for each trait. Locations E4 and E3, followed by E10, were “ideal” for SY; locations E1, E3 and E7 were ideal for high CP; and the “ideal” locations for CT were E3 and E5, followed by E2. Therefore, the scope of the cultivation determined the optimum locations for lentil cultivation. The GGE-biplot analysis revealed different discriminating abilities and representativeness among the locations for the identification of the most productive and stable genotypes. Location E3 (Orestiada, Region of Thrace) was recognized as being optimal for lentil breeding, as it was the “ideal” or close to “ideal” for the selection of superior genotypes for SY, CP, CT and CPY. Adaptable genotypes (cv. Dimitra, Samos) showed a high SY along with excellent values for CP, CT and CPY, and are suggested either for cultivation in many regions or to be exploited in breeding programs.


Agronomy ◽  
2020 ◽  
Vol 11 (1) ◽  
pp. 26
Author(s):  
Tao Sun ◽  
Xin Yang ◽  
Sheng Tang ◽  
Kefeng Han ◽  
Ping He ◽  
...  

Nutrient requirements for single-season rice using the quantitative evaluation of the fertility of tropical soils (QUEFTS) model in China have been estimated in a previous study, which involved all the rice varieties; however, it is unclear whether a similar result can be obtained for different rice varieties. In this study, data were collected from field experiments conducted from 2016 to 2019 in Zhejiang Province, China. The dataset was separated into two parts: japonica/indica hybrid rice and japonica rice. To produce 1000 kg of grain, 13.5 kg N, 3.6 kg P, and 20.4 kg K were required in the above-ground plant dry matter for japonica/indica hybrid rice, and the corresponding internal efficiencies (IEs) were 74.0 kg grain per kg N, 279.1 kg grain per kg P, and 49.1 kg grain per kg K. For japonica rice, 17.6 kg N, 4.1 kg P, and 23.0 kg K were required to produce 1000 kg of grain, and the corresponding IEs were 56.8 kg grain per kg N, 244.6 kg grain per kg P, and 43.5 kg grain per kg K. Field validation experiments indicated that the QUEFTS model could be used to estimate nutrient uptake of different rice varieties. We suggest that variety should be taken into consideration when estimating nutrient uptake for rice using the QUEFTS model, which would improve this model.


Agriculture ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 691
Author(s):  
Omotuyole Isiaka Ambali ◽  
Francisco Jose Areal ◽  
Nikolaos Georgantzis

This study analyses farmers’ adoption of improved rice technology, taking into account farmers’ risk preferences; the unobserved spatial heterogeneity associated with farmers’ risk preferences; farmers’ household and farm characteristics; farm locations, farmers’ access to information, and their perceptions on the rice improved varieties (i.e., high yield varieties, HYV). The study used data obtained from field experiments and a survey conducted in 2016 in Nigeria. An instrumental-variable probit model was estimated to account for potential endogenous farmers’ risk preference in the adoption decision model. Results show that risk averse (risk avoidant) farmers are less likely to adopt HYV, with the spatial lags of farmers’ risk attitudes found to be a good instrument for spatially unobserved variables (e.g., environmental and climatic factors). We conclude that studies supporting policy action aiming at the diffusion of improved rice varieties need to collect information, if possible, on farmers’ risk attitudes, local environmental and climatic conditions (e.g., climatic, topographic, soil quality, pest incidence) in order to ease the design and evaluation of policy actions on the adoption of improved agricultural technology.


2020 ◽  
pp. 073346482096261
Author(s):  
Carol Opdebeeck ◽  
Michael A. Katsaris ◽  
Anthony Martyr ◽  
Ruth A. Lamont ◽  
James A. Pickett ◽  
...  

Pet ownership has been associated with positive outcomes in many populations, yet the associations with physical and psychological wellbeing in people with dementia remain unclear. The current study used baseline data from 1,542 people living at home with mild-to-moderate dementia from the Improving the experience of Dementia and Enhancing Active Life (IDEAL) programme. Regression analyses investigated associations of pet ownership and pet care with self-reports of walking, loneliness, depression, and quality of life (QoL). After adjusting for covariates, having any pet was associated with higher likelihood of walking over 3 hr in the last week. Those with a dog and who were involved in its care were less likely to be lonely than those with no dog. Having any pet but no involvement in its care was associated with increased depression and decreased QoL compared with those without a pet. The key factor in the associations was involvement in the care of the pet by the person with dementia.


Agriculture ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 558
Author(s):  
Xing Huang ◽  
Su Jang ◽  
Backki Kim ◽  
Zhongze Piao ◽  
Edilberto Redona ◽  
...  

Rice yield is a complex trait that is strongly affected by environment and genotype × environment interaction (GEI) effects. Consideration of GEI in diverse environments facilitates the accurate identification of optimal genotypes with high yield performance, which are adaptable to specific or diverse environments. In this study, multiple environment trials were conducted to evaluate grain yield (GY) and four yield-component traits: panicle length, panicle number, spikelet number per panicle, and thousand-grain weight. Eighty-nine rice varieties were cultivated in temperate, subtropical, and tropical regions for two years. The effects of both GEI (12.4–19.6%) and environment (23.6–69.6%) significantly contributed to the variation of all yield-component traits. In addition, 37.1% of GY variation was explained by GEI, indicating that GY performance was strongly affected by the different environmental conditions. GY performance and genotype stability were evaluated using simultaneous selection indexing, and 19 desirable genotypes were identified with high productivity and broad adaptability across temperate, subtropical, and tropical conditions. These optimal genotypes could be recommended for cultivation and as elite parents for rice breeding programs to improve yield potential and general adaptability to climates.


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