scholarly journals Using Heading date 1 preponderant alleles from indica cultivars to breed high‐yield, high‐quality japonica rice varieties for cultivation in south China

2019 ◽  
Vol 18 (1) ◽  
pp. 119-128 ◽  
Author(s):  
Yujia Leng ◽  
Yihong Gao ◽  
Long Chen ◽  
Yaolong Yang ◽  
Lichao Huang ◽  
...  
Keyword(s):  
South China ◽  
Heading Date ◽  
High Yield ◽  
Japonica Rice ◽  
High Quality ◽  
Rice Varieties

scholarly journals Development of the PARMS marker of the TAC1 gene and its utilization in rice plant architecture breeding

Euphytica ◽  
2021 ◽  
Vol 217 (3) ◽  
Author(s):  
Ju Gao ◽  
Haifu Liang ◽  
Juan Huang ◽  
Dongjin Qing ◽  
Hao Wu ◽  
...  
Keyword(s):  
Rice Plant ◽  
Plant Architecture ◽  
Molecular Design ◽  
High Yield ◽  
Amplification Refractory Mutation System ◽  
Japonica Rice ◽  
Rice Varieties ◽  
Key Factor ◽  
Tiller Angle ◽  
The Ideal

AbstractThe ideal plant architecture is a new strategy for super high yield breeding of rice. Tiller angle is an important plant architecture character of rice. A reasonable tiller angle is a key factor for the ideal plant architecture and achieving high-yield breeding. Molecular design breeding is the most potential new direction of crop breeding in the future. The development of accurate and efficient functional molecular markers of target trait genes is crucial for molecular design breeding. The TAC1 (Tiller Angle Controlling) gene is the primary gene that regulates tiller angle in rice. This gene can be used to improve the compact plant architecture of indica and japonica rice varieties. The SNP variation from A to G at the fourth intron 3′ splicing point in TAC1 changes plant architecture. Based on the SNP variation, PM-TAC1 was successfully developed as a fluorescent functional molecular marker, via the penta-primer amplification refractory mutation system. Ninety-three rice materials were genotyped using this marker, and the marker was effectively used in rice plant architecture breeding. The successful development of this marker will contribute to the molecular breeding of rice plant architecture.

scholarly journals Effects of Selenium Fertilizer Application on Yield and Selenium Accumulation Characteristics of Different Japonica Rice Varieties

2021 ◽  
Vol 13 (18) ◽  
pp. 10284
Author(s):  
Juan Yan ◽  
Xiaoju Chen ◽  
Tonggui Zhu ◽  
Zhongping Zhang ◽  
Jianbo Fan
Keyword(s):  
Rice Yield ◽  
Fertilizer Application ◽  
High Yield ◽  
Utilization Rate ◽  
Japonica Rice ◽  
Rice Varieties ◽  
Polished Rice ◽  
Selenium Accumulation ◽  
Different Levels ◽  
Total Selenium

In this study, three japonica rice varieties—Nanjing 9108, Jiahua 1 and Wuyunjing 29—were supplied with different levels of nano-foliar selenium fertilizers (0, 40 and 80 kg Se ha−1) under field conditions. Their rice yield and absorption, accumulation, transportation and utilization of selenium were studied to find suitable selenium-rich rice cultivars and optimal selenium supply levels, while providing references for the development of selenium-rich rice. On an average basis, the Nanjing 9108, Jiahua 1 and Wuyunjing 29 yielded 8755 ± 190, 8200 ± 317 and 9098 ± 72.7 kg ha−1, respectively. The selenium content in polished rice of the three rice varieties is between 0.210 and 0.933 mg kg−1. When 40 g Se ha−1 nano-selenium fertilizer was used, the selenium accumulation in the shoots of Nanjing 9108, Jiahua 1 and Wuyunjing 29 was, respectively, 11.4 g Se ha−1, 12.3 g Se ha−1 and 12.2 g Se ha−1, and when 80 g Se ha−1 selenium fertilizer was applied, the total selenium accumulation of three rice varieties was, respectively, 2.45, 1.75 and 2.40 times that of 40 g Se ha−1 selenium fertilizer. No evident diversity was observed in the selenium transport coefficient and the apparent utilization rate of selenium among the three varieties. The three rice varieties in this experiment had a strong selenium enrichment capacity, and they could be planted as selenium-enriched and high-yield rice varieties. Further, the amount of selenium fertilizer should not exceed 40 g Se ha−1.

scholarly journals Screening and characterization of high-quality and high-yield <italic>japonica</italic> rice varieties in Yanhuai region of Anhui province

2020 ◽  
Vol 46 (4) ◽  
pp. 571-585
Author(s):  
Zhi-Peng XING ◽  
Guo-Dong LIU ◽  
Shang-Qin GAO ◽  
Shi QIU ◽  
Hai-Yan WEI ◽  
...  
Keyword(s):  
Anhui Province ◽  
High Yield ◽  
High Quality ◽  
Rice Varieties

scholarly journals Meta-QTL and ortho-MQTL analyses identified genomic regions controlling rice yield, yield-related traits and root architecture under water deficit conditions

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Bahman Khahani ◽  
Elahe Tavakol ◽  
Vahid Shariati ◽  
Laura Rossini
Keyword(s):  
Water Deficit ◽  
Root Architecture ◽  
Agronomic Traits ◽  
Heading Date ◽  
Dry Weight ◽  
Genetic Dissection ◽  
Rice Varieties ◽  
Average Confidence ◽  
Stable Qtls ◽  
Genomic Regions

AbstractMeta-QTL (MQTL) analysis is a robust approach for genetic dissection of complex quantitative traits. Rice varieties adapted to non-flooded cultivation are highly desirable in breeding programs due to the water deficit global problem. In order to identify stable QTLs for major agronomic traits under water deficit conditions, we performed a comprehensive MQTL analysis on 563 QTLs from 67 rice populations published from 2001 to 2019. Yield and yield-related traits including grain weight, heading date, plant height, tiller number as well as root architecture-related traits including root dry weight, root length, root number, root thickness, the ratio of deep rooting and plant water content under water deficit condition were investigated. A total of 61 stable MQTLs over different genetic backgrounds and environments were identified. The average confidence interval of MQTLs was considerably refined compared to the initial QTLs, resulted in the identification of some well-known functionally characterized genes and several putative novel CGs for investigated traits. Ortho-MQTL mining based on genomic collinearity between rice and maize allowed identification of five ortho-MQTLs between these two cereals. The results can help breeders to improve yield under water deficit conditions.

scholarly journals Genotypic Variation in Nutrient Uptake Requirements of Rice Using the QUEFTS Model

Agronomy ◽  
2020 ◽  
Vol 11 (1) ◽  
pp. 26
Author(s):  
Tao Sun ◽  
Xin Yang ◽  
Sheng Tang ◽  
Kefeng Han ◽  
Ping He ◽  
...  
Keyword(s):  
Nutrient Uptake ◽  
Field Experiments ◽  
Hybrid Rice ◽  
Genotypic Variation ◽  
Tropical Soils ◽  
Study Data ◽  
Japonica Rice ◽  
Rice Varieties ◽  
Indica Hybrid Rice ◽  
Validation Experiments

Nutrient requirements for single-season rice using the quantitative evaluation of the fertility of tropical soils (QUEFTS) model in China have been estimated in a previous study, which involved all the rice varieties; however, it is unclear whether a similar result can be obtained for different rice varieties. In this study, data were collected from field experiments conducted from 2016 to 2019 in Zhejiang Province, China. The dataset was separated into two parts: japonica/indica hybrid rice and japonica rice. To produce 1000 kg of grain, 13.5 kg N, 3.6 kg P, and 20.4 kg K were required in the above-ground plant dry matter for japonica/indica hybrid rice, and the corresponding internal efficiencies (IEs) were 74.0 kg grain per kg N, 279.1 kg grain per kg P, and 49.1 kg grain per kg K. For japonica rice, 17.6 kg N, 4.1 kg P, and 23.0 kg K were required to produce 1000 kg of grain, and the corresponding IEs were 56.8 kg grain per kg N, 244.6 kg grain per kg P, and 43.5 kg grain per kg K. Field validation experiments indicated that the QUEFTS model could be used to estimate nutrient uptake of different rice varieties. We suggest that variety should be taken into consideration when estimating nutrient uptake for rice using the QUEFTS model, which would improve this model.

Selection of high-quality sperm with thousands of parallel channels

Lab on a Chip ◽  
2021 ◽  
Author(s):  
Mohammad Simchi ◽  
Jason Riordon ◽  
Jae Bem You ◽  
Yihe Wang ◽  
Sa Xiao ◽  
...  
Keyword(s):  
Clinical Practice ◽  
High Selectivity ◽  
High Yield ◽  
Sperm Selection ◽  
High Quality ◽  
Parallel Channels ◽  
Selection Of

A 3D-structured sperm selection device is presented that achieves both high selectivity and high yield via thousands of parallel channels. The device significantly outperforms the best clinical practice by selecting ∼100 000 of higher-quality sperm.

scholarly journals Improved Rice Technology Adoption: The Role of Spatially-Dependent Risk Preference

Agriculture ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 691
Author(s):  
Omotuyole Isiaka Ambali ◽  
Francisco Jose Areal ◽  
Nikolaos Georgantzis
Keyword(s):  
Field Experiments ◽  
Climatic Factors ◽  
Risk Preferences ◽  
Risk Preference ◽  
Probit Model ◽  
Climatic Conditions ◽  
High Yield ◽  
Risk Attitudes ◽  
Policy Action ◽  
Rice Varieties

This study analyses farmers’ adoption of improved rice technology, taking into account farmers’ risk preferences; the unobserved spatial heterogeneity associated with farmers’ risk preferences; farmers’ household and farm characteristics; farm locations, farmers’ access to information, and their perceptions on the rice improved varieties (i.e., high yield varieties, HYV). The study used data obtained from field experiments and a survey conducted in 2016 in Nigeria. An instrumental-variable probit model was estimated to account for potential endogenous farmers’ risk preference in the adoption decision model. Results show that risk averse (risk avoidant) farmers are less likely to adopt HYV, with the spatial lags of farmers’ risk attitudes found to be a good instrument for spatially unobserved variables (e.g., environmental and climatic factors). We conclude that studies supporting policy action aiming at the diffusion of improved rice varieties need to collect information, if possible, on farmers’ risk attitudes, local environmental and climatic conditions (e.g., climatic, topographic, soil quality, pest incidence) in order to ease the design and evaluation of policy actions on the adoption of improved agricultural technology.

scholarly journals A Novel and Efficient High-Yield Method for Preparing Bacterial Ghosts

Toxins ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 420
Author(s):  
Yi Ma ◽  
Liu Cui ◽  
Meng Wang ◽  
Qiuli Sun ◽  
Kaisheng Liu ◽  
...  
Keyword(s):  
Large Scale ◽  
Expression System ◽  
High Yield ◽  
Wild Type ◽  
High Quality ◽  
Efficient Protection ◽  
Bacterial Ghosts ◽  
Cell Envelopes ◽  
Extracellular Structures ◽  
First Time

Bacterial ghosts (BGs) are empty cell envelopes possessing native extracellular structures without a cytoplasm and genetic materials. BGs are proposed to have significant prospects in biomedical research as vaccines or delivery carriers. The applications of BGs are often limited by inefficient bacterial lysis and a low yield. To solve these problems, we compared the lysis efficiency of the wild-type protein E (EW) from phage ΦX174 and the screened mutant protein E (EM) in the Escherichia coli BL21(DE3) strain. The results show that the lysis efficiency mediated by protein EM was improved. The implementation of the pLysS plasmid allowed nearly 100% lysis efficiency, with a high initial cell density as high as OD600 = 2.0, which was higher compared to the commonly used BG preparation method. The results of Western blot analysis and immunofluorescence indicate that the expression level of protein EM was significantly higher than that of the non-pLysS plasmid. High-quality BGs were observed by SEM and TEM. To verify the applicability of this method in other bacteria, the T7 RNA polymerase expression system was successfully constructed in Salmonella enterica (S. Enterica, SE). A pET vector containing EM and pLysS were introduced to obtain high-quality SE ghosts which could provide efficient protection for humans and animals. This paper describes a novel and commonly used method to produce high-quality BGs on a large scale for the first time.

High Microsatellite and SNP Genotyping Success Rates Established in a Large Number of Genomic DNA Samples Extracted From Mouth Swabs and Genotypes

2006 ◽  
Vol 9 (4) ◽  
pp. 501-506 ◽  
Author(s):  
Josine L. Min ◽  
Nico Lakenberg ◽  
Margreet Bakker-Verweij ◽  
Eka Suchiman ◽  
Dorret I. Boomsma ◽  
...  
Keyword(s):  
Success Rate ◽  
Genomic Dna ◽  
Snp Genotyping ◽  
High Yield ◽  
Success Rates ◽  
Nucleotide Polymorphism ◽  
High Quality ◽  
Single Nucleotide ◽  
Dna Yield ◽  
Yield And Quality

AbstractIn this article, we present the genomic DNA yield and the microsatellite and single nucleotide polymorphism (SNP) genotyping success rates of genomic DNA extracted from a large number of mouth swab samples. In total, the median yield and quality was determined in 714 individuals and the success rates in 378,480 genotypings of 915 individuals. The median yield of genomic DNA per mouth swab was 4.1 μg (range 0.1–42.2 μg) and was not reduced when mouth swabs were stored for at least 21 months prior to extraction. A maximum of 20 mouth swabs is collected per participant. Mouth swab samples showed in, respectively, 89% for 390 microsatellites and 99% for 24 SNPs a genotyping success rate higher than 75%. A very low success rate of genotyping (0%–10%) was obtained for 3.2% of the 915 mouth swab samples using microsatellite markers. Only 0.005% of the mouth swab samples showed a geno-typing success rate lower than 75% (range 58%–71%) using SNPs. Our results show that mouth swabs can be easily collected, stored by our conditions for months prior to DNA extraction and result in high yield and high-quality DNA appropriate for genotyping with high success rate including whole genome searches using microsatellites or SNPs.

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