scholarly journals Genetic basis and adaptation trajectory of soybean from its temperate origin to tropics

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Lidong Dong ◽  
Chao Fang ◽  
Qun Cheng ◽  
Tong Su ◽  
Kun Kou ◽  
...  
Keyword(s):  
Glycine Max ◽  
Genetic Basis ◽  
Edible Oils ◽  
Yield Traits ◽  
The Novel ◽  
Low Latitude ◽  
Tropical Regions ◽  
Genetic Complexity ◽  
Low Latitudes ◽  
The Tropics

AbstractSoybean (Glycine max) serves as a major source of protein and edible oils worldwide. The genetic and genomic bases of the adaptation of soybean to tropical regions remain largely unclear. Here, we identify the novel locus Time of Flowering 16 (Tof16), which confers delay flowering and improve yield at low latitudes and determines that it harbors the soybean homolog of LATE ELONGATED HYPOCOTYL (LHY). Tof16 and the previously identified J locus genetically additively but independently control yield under short-day conditions. More than 80% accessions in low latitude harbor the mutations of tof16 and j, which suggests that loss of functions of Tof16 and J are the major genetic basis of soybean adaptation into tropics. We suggest that maturity and yield traits can be quantitatively improved by modulating the genetic complexity of various alleles of the LHY homologs, J and E1. Our findings uncover the adaptation trajectory of soybean from its temperate origin to the tropics.

scholarly journals Obliquity forcing of low-latitude climate

2015 ◽  
Vol 11 (1) ◽  
pp. 221-241 ◽  
Author(s):  
J. H. C. Bosmans ◽  
F. J. Hilgen ◽  
E. Tuenter ◽  
L. J. Lourens
Keyword(s):  
High Latitude ◽  
Climate Model ◽  
Global Climate ◽  
Global Climate Model ◽  
Rotational Axis ◽  
Low Latitude ◽  
Low Latitudes ◽  
Paleoclimate Records ◽  
Induced Changes ◽  
The Tropics

Abstract. The influence of obliquity, the tilt of the Earth's rotational axis, on incoming solar radiation at low latitudes is small, yet many tropical and subtropical paleoclimate records reveal a clear obliquity signal. Several mechanisms have been proposed to explain this signal, such as the remote influence of high-latitude glacials, the remote effect of insolation changes at mid- to high latitudes independent of glacial cyclicity, shifts in the latitudinal extent of the tropics, and changes in latitudinal insolation gradients. Using a sophisticated coupled ocean–atmosphere global climate model, EC-Earth, without dynamical ice sheets, we performed two experiments of obliquity extremes. Our results show that obliquity-induced changes in tropical climate can occur without high-latitude ice sheet fluctuations. Furthermore, the tropical circulation changes are consistent with obliquity-induced changes in the cross-equatorial insolation gradient, implying that this gradient may be used to explain obliquity signals in low-latitude paleoclimate records instead of the classic 65° N summer insolation curve.

scholarly journals Obliquity forcing of low-latitude climate

2015 ◽  
Vol 11 (10) ◽  
pp. 1335-1346 ◽  
Author(s):  
J. H. C. Bosmans ◽  
F. J. Hilgen ◽  
E. Tuenter ◽  
L. J. Lourens
Keyword(s):  
High Latitude ◽  
Climate Model ◽  
Global Climate ◽  
Global Climate Model ◽  
Rotational Axis ◽  
Tropical Circulation ◽  
Low Latitude ◽  
Low Latitudes ◽  
Induced Changes ◽  
The Tropics

Abstract. The influence of obliquity, the tilt of the Earth's rotational axis, on incoming solar radiation at low latitudes is small, yet many tropical and subtropical palaeoclimate records reveal a clear obliquity signal. Several mechanisms have been proposed to explain this signal, such as the remote influence of high-latitude glacials, the remote effect of insolation changes at mid- to high latitudes independent of glacial cyclicity, shifts in the latitudinal extent of the tropics, and changes in latitudinal insolation gradients. Using a sophisticated coupled ocean–atmosphere global climate model, EC-Earth, without dynamical ice sheets, we performed two idealized experiments of obliquity extremes. Our results show that obliquity-induced changes in tropical climate can occur without high-latitude ice sheet fluctuations. Furthermore, the tropical circulation changes are consistent with obliquity-induced changes in the cross-equatorial insolation gradient, suggesting that this gradient may be used to explain obliquity signals in low-latitude palaeoclimate records instead of the classical 65° N summer insolation curve.

scholarly journals Holocene glaciation in the Rwenzori Mountains, Uganda

2020 ◽  
Author(s):  
Margaret S. Jackson ◽  
Meredith A. Kelly ◽  
James M. Russell ◽  
Alice M. Doughty ◽  
Jennifer A. Howley ◽  
...  
Keyword(s):  
Late Holocene ◽  
Early Holocene ◽  
Future Climate Change ◽  
Rwenzori Mountains ◽  
Tropical Regions ◽  
Temperature Changes ◽  
Tropical Glaciers ◽  
Low Latitudes ◽  
The Tropics ◽  
Exposure Ages

Abstract. Tropical glaciers are retreating rapidly, threatening alpine ecosystems across the low latitudes. Understanding how tropical glaciers responded to past periods of warming is crucial for predicting and adapting to future climate change, yet relatively little is known about glacial fluctuations in tropical regions during the recent past (i.e., the Holocene Epoch). This is particularly true in the African tropics, where data constraining the timing and magnitude of Holocene glacial fluctuations in the region are sparse and where temperatures during the middle Holocene were perhaps as warm as or warmer than today. Here we present new beryllium-10 surface-exposure ages that constrain Holocene glacial extents in the equatorial Rwenzori Mountains, Uganda. These results document rapid Early Holocene (~11.7–8.2 ka) glacial retreat in two separate catchments and indicate that Late Holocene (~4.2 ka-present) deposits mark the greatest expansion of Rwenzori glaciers during the last ~11 ka. Holocene glacial fluctuations elsewhere in tropical Africa and in tropical South America are broadly similar to those in the Rwenzori, with most tropical glaciers retreating rapidly during the Early Holocene and remaining near or inboard of their Late Holocene positions through much of Holocene time. The similarity of Holocene glacial fluctuations across the tropics implies that low-latitude glaciers responded to a common forcing mechanism, most likely temperature. Although the drivers of Holocene temperature changes in the tropics remains enigmatic, these data help constrain the expression of tropical temperature changes in the low latitudes.

The characteristics of transforming coordinates from the geocentric system WGS-84 for the Mercator projection under low latitudes conditions

2018 ◽  
Vol 940 (10) ◽  
pp. 2-6
Author(s):  
J.A. Younes ◽  
M.G. Mustafin
Keyword(s):  
Coordinate System ◽  
Satellite System ◽  
Programming Algorithm ◽  
Low Latitude ◽  
Model Calculations ◽  
Mercator Projection ◽  
Low Latitudes ◽  
Rectangular Coordinates ◽  
Global Navigation Satellite ◽  
Coordination Methods

The issue of calculating the plane rectangular coordinates using the data obtained by the satellite observations during the creation of the geodetic networks is discussed in the article. The peculiarity of these works is in conversion of the coordinates into the Mercator projection, while the plane coordinate system on the base of Gauss-Kruger projection is used in Russia. When using the technology of global navigation satellite system, this task is relevant for any point (area) of the Earth due to a fundamentally different approach in determining the coordinates. The fact is that satellite determinations are much more precise than the ground coordination methods (triangulation and others). In addition, the conversion to the zonal coordinate system is associated with errors; the value at present can prove to be completely critical. The expediency of using the Mercator projection in the topographic and geodetic works production at low latitudes is shown numerically on the basis of model calculations. To convert the coordinates from the geocentric system with the Mercator projection, a programming algorithm which is widely used in Russia was chosen. For its application under low-latitude conditions, the modification of known formulas to be used in Saudi Arabia is implemented.

scholarly journals Next-generation microbiology: from comparative genomics to gene function

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Carolin M. Kobras ◽  
Andrew K. Fenton ◽  
Samuel K. Sheppard
Keyword(s):  
Data Science ◽  
Genetic Basis ◽  
Turning Point ◽  
Functional Genomic ◽  
Bacterial Cells ◽  
Next Generation ◽  
New Techniques ◽  
Molecular Microbiology ◽  
Genetic Complexity ◽  
Generation Sequencing

AbstractMicrobiology is at a turning point in its 120-year history. Widespread next-generation sequencing has revealed genetic complexity among bacteria that could hardly have been imagined by pioneers such as Pasteur, Escherich and Koch. This data cascade brings enormous potential to improve our understanding of individual bacterial cells and the genetic basis of phenotype variation. However, this revolution in data science cannot replace established microbiology practices, presenting the challenge of how to integrate these new techniques. Contrasting comparative and functional genomic approaches, we evoke molecular microbiology theory and established practice to present a conceptual framework and practical roadmap for next-generation microbiology.

scholarly journals Dipole patterns in tropical precipitation were pervasive across landmasses throughout Marine Isotope Stage 5

2021 ◽  
Vol 2 (1) ◽  
Author(s):  
Katrina Nilsson-Kerr ◽  
Pallavi Anand ◽  
Philip B. Holden ◽  
Steven C. Clemens ◽  
Melanie J. Leng
Keyword(s):  
Large Scale ◽  
Marine Isotope Stage ◽  
Convergence Zone ◽  
Inter Tropical Convergence Zone ◽  
Tropical Regions ◽  
Tropical Precipitation ◽  
Rainfall Patterns ◽  
Marine Isotope Stage 5 ◽  
Climate Cooling ◽  
The Tropics

AbstractMost of Earth’s rain falls in the tropics, often in highly seasonal monsoon rains, which are thought to be coupled to the inter-hemispheric migrations of the Inter-Tropical Convergence Zone in response to the seasonal cycle of insolation. Yet characterization of tropical rainfall behaviour in the geologic past is poor. Here we combine new and existing hydroclimate records from six large-scale tropical regions with fully independent model-based rainfall reconstructions across the last interval of sustained warmth and ensuing climate cooling between 130 to 70 thousand years ago (Marine Isotope Stage 5). Our data-model approach reveals large-scale heterogeneous rainfall patterns in response to changes in climate. We note pervasive dipole-like tropical precipitation patterns, as well as different loci of precipitation throughout Marine Isotope Stage 5 than recorded in the Holocene. These rainfall patterns cannot be solely attributed to meridional shifts in the Inter-Tropical Convergence Zone.

scholarly journals Bioactive Compounds from Marine Sponges: Fundamentals and Applications

Marine Drugs ◽  
2021 ◽  
Vol 19 (5) ◽  
pp. 246
Author(s):  
Disha Varijakzhan ◽  
Jiun-Yan Loh ◽  
Wai-Sum Yap ◽  
Khatijah Yusoff ◽  
Rabiha Seboussi ◽  
...  
Keyword(s):  
Bioactive Compounds ◽  
Antimicrobial Agents ◽  
Marine Sponges ◽  
The Novel ◽  
Human Pathogens ◽  
Fish Pathogens ◽  
Tropical Regions ◽  
Theonella Swinhoei ◽  
Ability To Act ◽  
Sessile Invertebrates

Marine sponges are sessile invertebrates that can be found in temperate, polar and tropical regions. They are known to be major contributors of bioactive compounds, which are discovered in and extracted from the marine environment. The compounds extracted from these sponges are known to exhibit various bioactivities, such as antimicrobial, antitumor and general cytotoxicity. For example, various compounds isolated from Theonella swinhoei have showcased various bioactivities, such as those that are antibacterial, antiviral and antifungal. In this review, we discuss bioactive compounds that have been identified from marine sponges that showcase the ability to act as antibacterial, antiviral, anti-malarial and antifungal agents against human pathogens and fish pathogens in the aquaculture industry. Moreover, the application of such compounds as antimicrobial agents in other veterinary commodities, such as poultry, cattle farming and domesticated cats, is discussed, along with a brief discussion regarding the mode of action of these compounds on the targeted sites in various pathogens. The bioactivity of the compounds discussed in this review is focused mainly on compounds that have been identified between 2000 and 2020 and includes the novel compounds discovered from 2018 to 2021.

scholarly journals Evaluating the role of contracting and expanding rainforest in initiating cycles of speciation across the Isthmus of Panama

2012 ◽  
Vol 279 (1742) ◽  
pp. 3520-3526 ◽  
Author(s):  
Brian Tilston Smith ◽  
Amei Amei ◽  
John Klicka
Keyword(s):  
Bird Species ◽  
Tropical Regions ◽  
Isthmus Of Panama ◽  
Species Pairs ◽  
The Matrix ◽  
High Species Richness ◽  
The Rich ◽  
The Tropics ◽  
The Impact

Climatic and geological changes across time are presumed to have shaped the rich biodiversity of tropical regions. However, the impact climatic drying and subsequent tropical rainforest contraction had on speciation has been controversial because of inconsistent palaeoecological and genetic data. Despite the strong interest in examining the role of climatic change on speciation in the Neotropics there has been few comparative studies, particularly, those that include non-rainforest taxa. We used bird species that inhabit humid or dry habitats that dispersed across the Panamanian Isthmus to characterize temporal and spatial patterns of speciation across this barrier. Here, we show that these two assemblages of birds exhibit temporally different speciation time patterns that supports multiple cycles of speciation. Evidence for these cycles is further corroborated by the finding that both assemblages consist of ‘young’ and ‘old’ species, despite dry habitat species pairs being geographically more distant than pairs of humid habitat species. The matrix of humid and dry habitats in the tropics not only allows for the maintenance of high species richness, but additionally this study suggests that these environments may have promoted speciation. We conclude that differentially expanding and contracting distributions of dry and humid habitats was probably an important contributor to speciation in the tropics.

scholarly journals Impact of dams and irrigation schemes in Anopheline (Diptera: Culicidae) bionomics and malaria epidemiology

2012 ◽  
Vol 54 (4) ◽  
pp. 179-191 ◽  
Author(s):  
Jordi Sanchez-Ribas ◽  
Gabriel Parra-Henao ◽  
Anthony Érico Guimarães
Keyword(s):  
Control Measures ◽  
Successful Implementation ◽  
Negative Effects ◽  
Irrigation Scheme ◽  
Tropical Regions ◽  
Malaria Epidemiology ◽  
The Pacific ◽  
The Tropics ◽  
And Control ◽  
Anopheline Mosquitoes

Irrigation schemes and dams have posed a great concern on public health systems of several countries, mainly in the tropics. The focus of the present review is to elucidate the different ways how these human interventions may have an effect on population dynamics of anopheline mosquitoes and hence, how local malaria transmission patterns may be changed. We discuss different studies within the three main tropical and sub-tropical regions (namely Africa, Asia and the Pacific and the Americas). Factors such as pre-human impact malaria epidemiological patterns, control measures, demographic movements, human behaviour and local Anopheles bionomics would determine if the implementation of an irrigation scheme or a dam will have negative effects on human health. Some examples of successful implementation of control measures in such settings are presented. The use of Geographic Information System as a powerful tool to assist on the study and control of malaria in these scenarios is also highlighted.

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