scholarly journals A convenient synthesis of labelled rhodopsin and studies on its active site

1970 ◽  
Vol 119 (3) ◽  
pp. 359-366 ◽  
Author(s):  
M. D. Hirtenstein ◽  
M. Akhtar

Digitonin solutions of labelled rhodopsin, containing 3H in the retinyl moiety, were prepared by two related methods. Labelled rhodopsin was also prepared for the first time in cetyltrimethylammonium bromide and purified by column chromatography. It was shown that only certain rhodopsin preparations on denaturation in the dark and the reduction with sodium borohydride gave up to 60% of the radioactivity in a fraction characterized as N-retinylphosphatidylethanolamine. Such preparations also gave a lipid-linked retinyl moiety at the metarhodopsin-I stage, but, as expected, a protein-linked retinyl moiety at the metarhodopsin-II stage. Other preparations however, gave exclusively protein-bound radioactivity at the native-rhodopsin, metarhodopsin-I and metarhodopsin-II stages. It is therefore conceivable that the formation of N-retinylphosphatidylethanolamine is due to a non-enzymic reaction resulting from the transfer of the retinyl moiety from its native site to an amino group of a favourably oriented phospholipid molecule. The only firmly established aspect of the rhodopsin active site remains the demonstration in our previous work that at the metarhodopsin-II stage the retinyl moiety is linked to an ∈-amino group of lysine. On the basis of chemical reactivity it is argued that the light-induced conversion of rhodopsin into metarhodopsin II involves a profound conformational change resulting in the dislocation of the retinylideneiminium chromophore from a non-polar environment in rhodopsin to a polar environment in metarhodopsin II.

1968 ◽  
Vol 110 (4) ◽  
pp. 693-702 ◽  
Author(s):  
M Akhtar ◽  
P. T. Blosse ◽  
P. B. Dewhurst

1. Convenient methods for the preparation of tritiated 11-cis-retinol, 11-cis-retinal and rhodopsin are described. Irradiation of labelled rhodopsin in the presence of sodium borohydride resulted in the irreversible binding of the retinyl moiety to the active site. Degradative studies established that the retinyl moiety in this reduced derivative of rhodopsin was attached to the ∈-amino group of lysine. In connexion with this investigation the synthesis of a number of N-retinylidene- and N-retinyl-amino acids was achieved. Derivatives of lysine with the retinyl moiety attached either to the α-amino group or to the ∈-amino group were also synthesized and characterized. 2. It is suggested that the involvement of a charge-transfer interaction between the retinylidene chromophore and a suitable group −X or −X·H on the opsin best explains the spectroscopic properties of rhodopsin and other visual proteins.


2019 ◽  
Vol 23 (9) ◽  
pp. 1045-1075 ◽  
Author(s):  
Saigal ◽  
Sumbulunnisan Shareef ◽  
Habibur Rahman ◽  
Md. Musawwer Khan

Aminocoumarins are one of the important core structural systems, present in several biologically and medicinally active compounds. Owing to its natural occurrence, potential pharmacological applications and remarkable versatility as a privileged precursor, several proficient synthetic protocols have been reported in the literature over the past years. The presence of an amino group and enamine carbon enhances its chemical reactivity and thus such functionality is repeatedly used for the construction of various fused and simple heterocycles. This review highlights the preparation of different aminocoumarins and their applications for the construction of a variety of five, six and eight membered fused heterocycles.


RSC Advances ◽  
2015 ◽  
Vol 5 (93) ◽  
pp. 76040-76047 ◽  
Author(s):  
Zhenya Chen ◽  
Ye Li ◽  
Yue Feng ◽  
Liang Chen ◽  
Qipeng Yuan

Arg660 was found as a new active site and Asn795Ala and Trp818Ala mutants showed higher activities than the wild type based on molecular docking simulation analysis for the first time.


Antioxidants ◽  
2021 ◽  
Vol 10 (6) ◽  
pp. 946
Author(s):  
Tom E. Forshaw ◽  
Julie A. Reisz ◽  
Kimberly J. Nelson ◽  
Rajesh Gumpena ◽  
J. Reed Lawson ◽  
...  

Human peroxiredoxins (Prx) are a family of antioxidant enzymes involved in a myriad of cellular functions and diseases. During the reaction with peroxides (e.g., H2O2), the typical 2-Cys Prxs change oligomeric structure between higher order (do)decamers and disulfide-linked dimers, with the hyperoxidized inactive state (-SO2H) favoring the multimeric structure of the reduced enzyme. Here, we present a study on the structural requirements for the repair of hyperoxidized 2-Cys Prxs by human sulfiredoxin (Srx) and the relative efficacy of physiological reductants hydrogen sulfide (H2S) and glutathione (GSH) in this reaction. The crystal structure of the toroidal Prx1-Srx complex shows an extended active site interface. The loss of this interface within engineered Prx2 and Prx3 dimers yielded variants more resistant to hyperoxidation and repair by Srx. Finally, we reveal for the first time Prx isoform-dependent use of and potential cooperation between GSH and H2S in supporting Srx activity.


1994 ◽  
Vol 24 (12) ◽  
pp. 1761-1765 ◽  
Author(s):  
Xue-Rong Zhao ◽  
Ming-De Ruan ◽  
Wei-Qiang Fan ◽  
Xun-Jun Zhou

2015 ◽  
Vol 68 (7) ◽  
pp. 1091 ◽  
Author(s):  
Emad H. Aish

This study investigated the synthesis, activity, epoxide selectivity, H2O2 efficiency, and recyclability of new heterogeneous alkene epoxidation catalysts prepared by chemical grafting of new SiH-functionalized tripodal Ti–polyhedral oligomeric silsesquioxane (Ti-POSS) complexes in hyperbranched poly(siloxysilane) via hydrosilation. Crosslinked hyperbranched poly(siloxysilane)-grafted [{(p-HSiMe2(CH2)2C6H4)(c-C6H11)6Si7O12}Ti(NMe2)] (11) and crosslinked hyperbranched poly(siloxysilane)-grafted [{(HSiMe2(CH2)3)(i-C4H9)6Si7O12}- Ti(NMe2)] (12) displayed high activity, epoxide selectivity (≥98 %), and H2O2 efficiency (≥97 %) in cyclohexene and 1-octene epoxidation with aqueous H2O2. Moreover, these catalysts were highly recyclable with retained activity and durability and proved to be truly heterogeneous. Using chemical grafting for the synthesis of 11 and 12 enhanced their recyclability and durability with retained activity. The high H2O2 efficiency can be attributed to the uniformly non-polar environment provided about Ti in 11 and 12 by the polymer; this results in low water concentrations and higher [alkene] : [H2O2] ratios at the Ti active site than in the rest of the solution. These effects enhance the epoxide selectivity and minimize leaching of titanium.


1968 ◽  
Vol 108 (5) ◽  
pp. 861-866 ◽  
Author(s):  
S. S. Husain ◽  
G. Lowe

Papain that had been irreversibly inhibited with 1,3-dibromo[2−14C]acetone was reduced with sodium borohydride and carboxymethylated with iodoacetic acid. After digestion with trypsin and α-chymotrypsin the radioactive peptides were purified chromatographically. Their amino acid composition indicated that cysteine-25 and histidine-106 were cross-linked. Since cysteine-25 is known to be the active-site cysteine residue, histidine-106 must be the active-site histidine residue.


Science ◽  
2019 ◽  
Vol 364 (6442) ◽  
pp. 787-792 ◽  
Author(s):  
Miles H. Black ◽  
Adam Osinski ◽  
Marcin Gradowski ◽  
Kelly A. Servage ◽  
Krzysztof Pawłowski ◽  
...  

Enzymes with a protein kinase fold transfer phosphate from adenosine 5′-triphosphate (ATP) to substrates in a process known as phosphorylation. Here, we show that the Legionella meta-effector SidJ adopts a protein kinase fold, yet unexpectedly catalyzes protein polyglutamylation. SidJ is activated by host-cell calmodulin to polyglutamylate the SidE family of ubiquitin (Ub) ligases. Crystal structures of the SidJ-calmodulin complex reveal a protein kinase fold that catalyzes ATP-dependent isopeptide bond formation between the amino group of free glutamate and the γ-carboxyl group of an active-site glutamate in SidE. We show that SidJ polyglutamylation of SidE, and the consequent inactivation of Ub ligase activity, is required for successful Legionella replication in a viable eukaryotic host cell.


2011 ◽  
Vol 197-198 ◽  
pp. 1577-1581 ◽  
Author(s):  
Shu Ge Peng ◽  
Jun Na Liu ◽  
Xiao Fei Liu ◽  
Yu Qing Zhang ◽  
Jun Zhang

Poly (N-vinyl-2-pyrrolidone) (PVP) - stabilized ruthenium (0) nanorods have been successfully synthesized by refluxing ruthenium (Ⅲ) chloride (RuCl3) in low boiling point alcohols (including ethanol, n-propanol, and n-butanol) using microwave heating for the first time. The effects of low boiling point alcohols on the preparation and catalytic property of ruthenium nanorods were discussed. UV-Vis absorption spectra indicated ruthenium nanorods could be synthesized in n-butanol after 2 h refluxing, far below the refluxing time in ethanol and n-propanol. The activation energy of the hydrolysis of NaBH4 catalyzed by Ruthenium (0) nanorods obtained in ethanol, n-propanol, and n-butanol were determined to be 41.1, 33.3, and 27.9 kJ / mol, respectively.


2013 ◽  
Vol 815 ◽  
pp. 574-578
Author(s):  
Xiao Zhen Liu ◽  
Yu Zhen Li ◽  
Ling Ling Song ◽  
Xiao Dong Yu ◽  
Wei Ting Lu

TiB2and Gd2O3were used as codeposited particles for the first time in preparing Ni-TiB2-Gd2O3composite coatings to improve its performance. Ni-TiB2-Gd2O3composite coatings were prepared by electrodeposition method from a nickel cetyltrimethylammonium bromide and hexadecylpyridinium bromide solution containing TiB2and Gd2O3particles. The content of codeposited TiB2and Gd2O3in the composite coatings was controlled by the addition of different TiB2and Gd2O3particles concentrations in the solution, respectively. The effects of TiB2and Gd2O3content on microhardness, wear weight loss, and friction coefficient of composite coatings were investigated, respectively. Ni-TiB2-Gd2O3composite coatings shows higher microhardness and lower wear weight loss, friction coefficient than those of the pure Ni coating and Ni-TiB2composite coatings. The wear weight loss of Ni-TiB2-Gd2O3composite coatings is lower 9.13 and 1.59 times than that of the pure Ni coating and Ni-TiB2composite coatings, respectively. The friction coefficients of pure Ni coating, Ni-TiB2and Ni-TiB2-Gd2O3composite coatings are 0.723, 0.815 and 0.43, respectively. Ni-TiB2-Gd2O3composite coatings shows the least friction coefficient among the three coatings. Gd2O3particles in composite coatings serves as solid lubricant between contact surfaces, decreases the friction coefficient, abates the wear and increases the corrosion resistance of the composite coatings. The loading-bearing capacity and the wear-reducing effect of the Gd2O3particles in the composite coatings are closely related to the content of Gd2O3particles in the composite coatings.


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