scholarly journals A freeze-and-thaw-induced fragment of the microtubule-associated protein tau in rat brain extracts: implications for the biochemical assessment of neurotoxicity

2021 ◽  
Vol 41 (3) ◽  
Author(s):  
Israel C. Vasconcelos ◽  
Raquel M. Campos ◽  
Hanna K. Schwaemmle ◽  
Ana P. Masson ◽  
Gustavo D. Ferrari ◽  
...  

Abstract Tau is a microtubule-associated protein (MAP) responsible for controlling the stabilization of microtubules in neurons. Tau function is regulated by phosphorylation. However, in some neurological diseases Tau becomes aberrantly hyperphosphorylated, which contributes to the pathogenesis of neurological diseases, known as tauopathies. Western blotting (WB) has been widely employed to determine Tau levels in neurological disease models. However, Tau quantification by WB should be interpreted with care, as this approach has been recognized as prone to produce artifactual results if not properly performed. In the present study, our goal was to evaluate the influence of a freeze-and-thaw cycle, a common procedure preceding WB, to the integrity of Tau in brain homogenates from rats, 3xTg-AD mice and human samples. Homogenates were prepared in ice-cold RIPA buffer supplemented with protease/phosphatase inhibitors. Immediately after centrifugation, an aliquot of the extracts was analyzed via WB to quantify total and phosphorylated Tau levels. The remaining aliquots of the same extracts were stored for at least 2 weeks at either −20 or −80°C and then subjected to WB. Extracts from rodent brains submitted to freeze-and-thaw presented a ∼25 kDa fragment immunoreactive to anti-Tau antibodies. An in-gel digestion followed by mass spectrometry (MS) analysis in excised bands revealed this ∼25 kDa species corresponds to a Tau fragment. Freeze-and-thaw-induced Tau proteolysis was detected even when extracts were stored at −80°C. This phenomenon was not observed in human samples at any storage condition tested. Based on these findings, we strongly recommend the use of fresh extracts of brain samples in molecular analysis of Tau levels in rodents.

2018 ◽  
Author(s):  
Israel C. Vasconcelos ◽  
Raquel M. Campos ◽  
Hanna K. Schwaemmle ◽  
Ana P. Masson ◽  
Gustavo D. Ferrari ◽  
...  

ABSTRACTTau is a microtubule-associated protein responsible for controlling the stabilization of microtubules in neurons. Tau function is regulated by phosphorylation. However, in some neurological diseases Tau becomes aberrantly hyperphosphorylated, which contributes to the pathogenesis of neurological diseases, known as tauopathies. Western blotting (WB) has been widely employed to determine Tau levels in neurological disease models. However, Tau quantification by WB should be interpreted with care, as this approach has been recognized as prone to produce artifactual results if not properly performed. In this study, our goal was to evaluate the influence of a freeze-and-thaw cycle, a common procedure preceding WB, to the integrity of Tau in brain homogenates from rats, 3xTg-AD mice and human samples. Homogenates were prepared in ice-cold RIPA buffer supplemented with protease/phosphatase inhibitors. Immediately after centrifugation, an aliquot of the extracts was analyzed via WB to quantify total and phosphorylated Tau levels. The remaining aliquots were stored for at least 2 weeks at either −20°C or −80°C and then subjected to WB. Extracts from rodent brains submitted to freeze-and-thaw presented a ~25 kDa fragment immunoreactive to anti-Tau antibodies. An in-gel digestion followed by mass spectrometry analysis in excised bands revealed this ~25 kDa species corresponds to a Tau fragment. Freeze-and-thaw-induced Tau proteolysis was detected even when extracts were stored at −80°C. This phenomenon was not observed in human samples at any storage condition tested. Based on these findings, we strongly recommend the use of fresh extracts of brain samples in molecular analysis of Tau levels in rodents.


2021 ◽  
Vol 13 (13) ◽  
pp. 2505
Author(s):  
Greg Robson ◽  
Paul Treitz ◽  
Scott F. Lamoureux ◽  
Kevin Murnaghan ◽  
Brian Brisco

Differential interferometry of synthetic aperture radar (DInSAR) can be used to generate high-precision surface displacement maps in continuous permafrost environments, capturing isotropic surface subsidence and uplift associated with the seasonal freeze and thaw cycle. We generated seasonal displacement maps using DInSAR with ultrafine-beam Radarsat-2 data for the summers of 2013, 2015, and 2019 at Cape Bounty, Melville Island, and examined them in combination with a land-cover classification, meteorological data, topographic data, optical satellite imagery, and in situ measures of soil moisture, soil temperature, and depth to the frost table. Over the three years studied, displacement magnitudes (estimated uncertainty ± 1 cm) of up to 10 cm per 48-day DInSAR stack were detected. However, generally, the displacement was far smaller (up to 4 cm). Surface displacement was found to be most extensive and of the greatest magnitude in low-lying, wet, and steeply sloping areas. The few areas where large vertical displacements (>2.5 cm) were detected in multiple years were clustered in wet, low lying areas, on steep slopes or ridges, or close to the coast. DInSAR also captured the expansion of two medium-sized retrogressive thaw slumps (RTS), exhibiting widespread negative surface change in the slump floor.


2021 ◽  
Author(s):  
Harish Palnitkar ◽  
Rolf Reiter ◽  
Shreyan Majumdar ◽  
Dieter Klatt ◽  
Thomas Royston

1992 ◽  
Vol 29 (1) ◽  
pp. 131-142 ◽  
Author(s):  
Marius Roy ◽  
Jean Tardif ◽  
Serge Leroueil ◽  
Gaston Larose ◽  
Pierre La Rochelle

This study deals with the freeze and thaw effects on the mechanical behaviour of the clayey subgrades exposed by cuts for the placement of road foundations. Twelve cut sites have been analysed in cooperation with the ministère des Transports du Québec. As damages were observed after the first winter on some of the sites, whereas none were apparent on other sites, it was possible to define the factors that may lead to such damages. In particular, the field study confirms the laboratory results showing that criteria based on liquidity index are sufficient to characterize the change of mechanical behaviour of the clayey soils subjected to one freeze–thaw cycle. Key words : clay, liquidity index, freeze-thaw, bearing capacity of roads, heaving, cut. [Translated by the Journal]


2014 ◽  
Vol 2014 ◽  
pp. 1-6 ◽  
Author(s):  
Yang Liu ◽  
Guangqiang Gao ◽  
Chun Yang ◽  
Kun Zhou ◽  
Baozhong Shen ◽  
...  

Background.The purpose of the present study was to assess the feasibility of using miR-126 in the urine as a biomarker for diabetic nephropathy.Methods.miRNAs were extracted from the urine samples of T2DM patients with diabetic nephropathy (DN;n=92), T2DM without DN (n=86), and 85 healthy volunteers using quantitative reverse transcriptase polymerase chain reaction (real-time polymerase chain reaction) analysis. Stability of urinary miR-126 and factors that affected the stability were assessed. A subgroup analysis was also carried out to compare the urinary miR-126 level in T2DM patients well controlled by the treatment versus those who were not well controlled.Results.Urinary miR-126 was stable when the urine samples were kept at room temperature for extended period of time, 4°C, −20°C, and −80°C for up to 12 hours or subjected to 10 freeze-and-thaw cycle. Urinary miR-126 was significantly higher in T2DM patients with DN (5.76±0.33versus3.25±0.45in T2DM patients without DN). Successful treatment significantly reduced urinary miR-126 in T2DM patients with DN to3.89±0.52(P<0.05).Conclusion.miR-126 in the urine is stable and it could be used as a biomarker of DN and to monitor the treatment response.


2021 ◽  
Vol 1162 ◽  
pp. 180-190
Author(s):  
Vitarani Dwi Ananda Ningrum ◽  
Levia Chitra Dewi ◽  
Ari Wibowo

Warfarin is an anticoagulant with a narrow therapeutic index ranging from 1-10 µg/mL as well as the ability to distribute into saliva. Therefore, saliva can be selected as an alternative biological fluid in warfarin bioanalysis of therapeutic drug monitoring (TDM) since it is easier and more acceptable, particularly among pediatric and geriatric patients. Stability is an important part of the bioanalysis of warfarin in TDM services. This study aims to conduct a stability of warfarin in spiked-saliva using Fluorometric HPLC at an excitation wavelength of 310 nm and 390 nm emission. Analytes were separated using phosphate buffer:methanol as the mobile phase with a flow rate of 1.0 mL/min and an injection volume of 20µL as well as 150mmx4.5mm C18 as the stationary phase. The standard curve of warfarin with a concentration range of 0-20 ng/mL resulted in a correlation coefficient of 0.999. This study showed that the warfarin stock solution was stable at both 25°C and 4°C for 24 hours and 21 days, respectively. Meanwhile, warfarin in the saliva matrix also remained stable at 25°C for 24 hours and in a storage condition of -20°C for 21 days. In this research, the sample of saliva from patients administered with warfarin that has been treated with a maximum freeze-thaw cycle of 3-fold or 24 hours after preparation could consistently provide accurate data to be used as an approach to making a decision on dosage adjustment and diagnosis of warfarin toxicity in the clinical setting.


2020 ◽  
Vol 98 (Supplement_3) ◽  
pp. 234-234
Author(s):  
Jera L Monaghan ◽  
Abigail R Rathert ◽  
Allison M Meyer

Abstract The objective of this study was to determine whether repeated freeze and thaw cycles alter bovine circulating metabolite concentrations, which serve as indicators of nutrient utilization. In research settings, it is common to thaw and refreeze samples when confirming results or performing further analyses; thus, it is important to determine if these actions alter metabolites. Jugular blood samples were collected from beef cows (n = 14) and fall-born calves (n = 14) at weaning. Samples were processed into multiple aliquots and stored at -20°C until analysis. Samples were thawed at 4°C for 8 to 10 h on each day of analysis and refrozen for at least 48 h between cycles. Concentrations of serum non-esterified fatty acids (NEFA), serum urea N, plasma triglycerides, and plasma glucose were analyzed using commercially available kits on a UV-visible light plate reader. Data were analyzed with sample type (cow vs. calf), thaw (cycles 1-4), and their interaction in a mixed model. Additionally, R2 were determined among freeze-thaw cycles within each metabolite. Thaw cycle impacted glucose concentrations (P = 0.03); other metabolites were unaffected (P &gt; 0.25). Thaw cycle and its interaction with sample type did not affect metabolite concentrations (P &gt; 0.33). Sample type did not affect triglyceride and BUN concentrations (P &gt; 0.34). There was a type effect (P &lt; 0.0001) for NEFA and glucose; NEFA were greater in cows and glucose was greater in calves. There was a strong relationship between urea N thaw cycles 1 and 2 (R2 = 0.88), which was also apparent between all other urea N, triglycerides, NEFA, and glucose cycles (R2 ≥ 0.79, 0.96, 0.91, and 0.61 respectively). These data indicate that repetitive freezing and thawing of bovine serum and plasma samples has little effect on non-esterified fatty acids, triglycerides, and urea N, but may impact glucose concentrations.


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