scholarly journals Recombinant silicateins as model biocatalysts in organosiloxane chemistry

2017 ◽  
Vol 114 (27) ◽  
pp. E5285-E5291 ◽  
Author(s):  
S. Yasin Tabatabaei Dakhili ◽  
Stephanie A. Caslin ◽  
Abayomi S. Faponle ◽  
Peter Quayle ◽  
Sam P. de Visser ◽  
...  

The family of silicatein enzymes from marine sponges (phylum Porifera) is unique in nature for catalyzing the formation of inorganic silica structures, which the organisms incorporate into their skeleton. However, the synthesis of organosiloxanes catalyzed by these enzymes has thus far remained largely unexplored. To investigate the reactivity of these enzymes in relation to this important class of compounds, their catalysis of Si–O bond hydrolysis and condensation was investigated with a range of model organosilanols and silyl ethers. The enzymes’ kinetic parameters were obtained by a high-throughput colorimetric assay based on the hydrolysis of 4-nitrophenyl silyl ethers. These assays showed unambiguous catalysis with kcat/Km values on the order of 2–50 min−1 μM−1. Condensation reactions were also demonstrated by the generation of silyl ethers from their corresponding silanols and alcohols. Notably, when presented with a substrate bearing both aliphatic and aromatic hydroxy groups the enzyme preferentially silylates the latter group, in clear contrast to nonenzymatic silylations. Furthermore, the silicateins are able to catalyze transetherifications, where the silyl group from one silyl ether may be transferred to a recipient alcohol. Despite close sequence homology to the protease cathepsin L, the silicateins seem to exhibit no significant protease or esterase activity when tested against analogous substrates. Overall, these results suggest the silicateins are promising candidates for future elaboration into efficient and selective biocatalysts for organosiloxane chemistry.

1987 ◽  
Vol 65 (3) ◽  
pp. 670-682 ◽  
Author(s):  
Edward Piers ◽  
Grace L. Jung ◽  
Edward H. Ruediger

Thermolysis of each of the enol silyl ethers 31–35 affords, cleanly and efficiently, the bicyclo[3.2.1]octadienes 36–40, respectively. Similarly, thermal rearrangement of the enol silyl ether 50 provides the diene 51. Hydrolysis of 36, 37, and 39, and decarbomethoxylation of the resultant keto esters 41, 42, and 44, gives the ketones 46–48, respectively. The ketone 46 is also obtained by acid hydrolysis of 51. Conversion of 6-methyl-1-hepten-4-yn-3-ol (56) into the enol ether 63 is described. Thermolysis of 63 gives 64, which, upon acid hydrolysis, affords 65. Thermolysis of the enones 68 and 69 produces the bicyclic dienones 70 and 71, respectively. On the other hand, thermolysis of 73 and 74, derived from the enone 69, provides the C-8 exo substituted bicyclo[3.2.1]octa-2,6-dienes 75 and 76, which are transformed smoothly, by acid hydrolysis, into the ketones 77 and 78, respectively.


2007 ◽  
Vol 79 (4) ◽  
pp. 481-490 ◽  
Author(s):  
Angelo Fontana ◽  
Giuliana d'Ippolito ◽  
Adele Cutignano ◽  
Antonio Miralto ◽  
Adrianna Ianora ◽  
...  

Oxylipins are important signal transduction molecules widely distributed in animals and plants where they regulate a variety of events associated with physiological and pathological processes. The family embraces several different metabolites that share a common origin from the oxygenase-catalyzed oxidation of polyunsaturated fatty acids. The biological role of these compounds has been especially studied in mammalians and higher plants, although a varied and very high concentration of these products has also been reported from marine macroalgae. This article gives a summary of our results concerning the oxylipin chemistry of marine diatoms, a major class of planktonic microalgae that discourage predation from their natural grazers, zooplanktonic copepods, using chemical warfare. These apparently harmless microscopic cells produce a plethora of oxylipins, including short-chain unsaturated aldehydes, hydroxyl-, keto-, and epoxyhydroxy fatty acid derivatives, that induce reproductive failure in copepods through abortions, congenital malformations, and reduced larval growth. The biochemical process involved in the production of these compounds shows a simple regulation based on decompartmentation and mixing of preexisting enzymes and requires hydrolysis of chloroplast-derived glycolipids to feed the downstream activities of C16 and C20 lipoxygenases.


Planta Medica ◽  
2016 ◽  
Vol 82 (09/10) ◽  
pp. 816-831 ◽  
Author(s):  
Leesa Habener ◽  
John Hooper ◽  
Anthony Carroll

Zootaxa ◽  
2004 ◽  
Vol 725 (1) ◽  
pp. 1 ◽  
Author(s):  
TOUFIEK SAMAAI ◽  
VASHA GOVENDER ◽  
MICHELLE KELLY

The new genus Cyclacanthia n.g. is erected in the poecilosclerid Family Latrunculiidae for the type species Latrunculia bellae Samaai & Kelly, 2003, and two further species, Cyclacanthia cloverlyae sp. nov., and Cyclacanthia mzimayiensis sp. nov.. The latter species are from the subtropical east coast of South Africa, whereas C. bellae has only been found further south in warm temperate Algoa Bay. Cyclacanthia n.g. differs from other Latrunculiidae genera in the ontogeny, morphology and structure of the mature microsclere, the isospinodiscorhabd, which has only three major whorls of projections as opposed to the four in species of Latrunculia du Bocage. Additional diagnostic characters include the presence of broad swathes of megascleres that diverge from the base of the sponge towards the upper choanosome, where they form loose brushes and the typical whispy reticulation of most Latrunculiidae. The ectosome is composed of a dense tangential layer of megascleres, an irregular palisade of microscleres at the surface, and a permanently encrusting habit. Cyclacanthia n.g. is the second new latrunculid genus recently described from shallow subtidal South African waters, following major revision of the family. The presence of species in four of the five known genera in the family, on South African coastlines, suggests a diversity hot-spot for the family in this region.


2019 ◽  
Vol 20 (20) ◽  
pp. 5105 ◽  
Author(s):  
Mario Schubert ◽  
Björn Binnewerg ◽  
Alona Voronkina ◽  
Lyubov Muzychka ◽  
Marcin Wysokowski ◽  
...  

Marine sponges remain representative of a unique source of renewable biological materials. The demosponges of the family Ianthellidae possess chitin-based skeletons with high biomimetic potential. These three-dimensional (3D) constructs can potentially be used in tissue engineering and regenerative medicine. In this study, we focus our attention, for the first time, on the marine sponge Ianthella labyrinthus Bergquist & Kelly-Borges, 1995 (Demospongiae: Verongida: Ianthellidae) as a novel potential source of naturally prestructured bandage-like 3D scaffolds which can be isolated simultaneously with biologically active bromotyrosines. Specifically, translucent and elastic flat chitinous scaffolds have been obtained after bromotyrosine extraction and chemical treatments of the sponge skeleton with alternate alkaline and acidic solutions. For the first time, cardiomyocytes differentiated from human induced pluripotent stem cells (iPSC-CMs) have been used to test the suitability of I. labyrinthus chitinous skeleton as ready-to-use scaffold for their cell culture. Results reveal a comparable attachment and growth on isolated chitin-skeleton, compared to scaffolds coated with extracellular matrix mimetic Geltrex®. Thus, the natural, unmodified I. labyrinthus cleaned sponge skeleton can be used to culture iPSC-CMs and 3D tissue engineering. In addition, I. labyrinthus chitin-based scaffolds demonstrate strong and efficient capability to absorb blood deep into the microtubes due to their excellent capillary effect. These findings are suggestive of the future development of new sponge chitin-based absorbable hemostats as alternatives to already well recognized cellulose-based fabrics.


1985 ◽  
Vol 231 (2) ◽  
pp. 357-361 ◽  
Author(s):  
N M Hooper ◽  
A J Kenny ◽  
A J Turner

Both endopeptidase-24.11 and peptidyl dipeptidase A have previously been shown to hydrolyse the neuropeptide substance P. The structurally related peptide neurokinin A is also shown to be hydrolysed by pig kidney endopeptidase-24.11. The identified products indicated hydrolysis at two sites, Ser5-Phe6 and Gly8-Leu9, consistent with the known specificity of the enzyme. The pattern of hydrolysis of neurokinin A by synaptic membranes prepared from pig striatum was similar to that observed with purified endopeptidase-24.11, and hydrolysis was substantially abolished by the selective inhibitor phosphoramidon. Peptidyl dipeptidase A purified from pig kidney was shown to hydrolyse substance P but not neurokinin A. It is concluded that endopeptidase-24.11 has the general capacity to hydrolyse and inactivate the family of tachykinin peptides, including substance P and neurokinin A.


2008 ◽  
Vol 52 (7) ◽  
pp. 2473-2479 ◽  
Author(s):  
Magdalena Stoczko ◽  
Jean-Marie Frère ◽  
Gian Maria Rossolini ◽  
Jean-Denis Docquier

ABSTRACT Metallo-β-lactamases (MBLs) are zinc-dependent bacterial enzymes characterized by an efficient hydrolysis of carbapenems and a lack of sensitivity to commercially available β-lactamase inactivators. Apart from the acquired subclass B1 enzymes, which exhibit increasing clinical importance and whose evolutionary origin remains unclear, most MBLs are encoded by resident genes found in the genomes of organisms belonging to at least three distinct phyla. Using genome database mining, we identified an open reading frame (ORF) (ECA2849) encoding an MBL-like protein in the sequenced genome of Erwinia carotovora, an important plant pathogen. Although no detectable β-lactamase activity could be found in E. carotovora, a recombinant Escherichia coli strain in which the ECA2849 ORF was cloned showed decreased susceptibility to several β-lactams, while carbapenem MICs were surprisingly poorly affected. The enzyme, named CAR-1, was purified by means of ion-exchange chromatography steps, and its characterization revealed unique structural and functional features. This new MBL was able to efficiently hydrolyze cephalothin, cefuroxime, and cefotaxime and, to a lesser extent, penicillins and the other cephalosporins but only poorly hydrolyzed meropenem, while imipenem was not recognized. CAR-1 is the first example of a functional naturally occurring MBL in the family Enterobacteriaceae (order Enterobacteriales) and highlights the extraordinary structural and functional diversity exhibited by MBLs.


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