scholarly journals Trichome abundance, chlorophyll content and the spectral coefficient for light absorption of Trichodesmium slicks observed in the Southwestern Atlantic

2020 ◽  
Vol 42 (2) ◽  
pp. 135-139
Author(s):  
Amália Maria Sacilotto Detoni ◽  
Aurea Maria Ciotti

Abstract Dense slicks of Trichodesmium were found in the shelf-break region in the Southwestern Atlantic during austral spring and autumn. A total of 14 slicks were sampled, and the absorption coefficients of phytoplankton (aph(λ)) indicated clear spectral features of phycobilin pigments. Although these samples showed low-degradation products and detrital importance, the chemotaxonomy, shape, and magnitude of aph(λ) indicated the importance of co-occurring species in the slicks. In addition to the difficulties of enumerating trichomes in situ, co-occurring species affect the expected chlorophyll-a (Chl-a) to trichome ratio, further complicating the detection of Trichodesmium by ocean colour remote sensing. Our results showed that trichome density could be predicted similarly by Chl-a and by aph(621), especially for trichome densities above 8000 trichomes L−1. The phycocyanin spectral feature is a potential source of quantitative information for the detection of Trichodesmium, but noninvasive techniques for quantifying the abundance of Trichodesmium in natural waters are necessary.

Author(s):  
Manh Van Nguyen ◽  
Chao-Hung Lin ◽  
Hone-Jay Chu ◽  
Lalu Muhamad Jaelani ◽  
Muhammad Aldila Syariz

The spatial heterogeneity and nonlinearity exhibited by bio-optical relationships in turbid inland waters complicate the retrieval of chlorophyll-a (Chl-a) concentration from multispectral satellite images. Most studies achieved satisfactory Chl-a estimation and focused solely on the spectral regions from near-infrared (NIR) to red spectral bands. However, the optical complexity of turbid waters may vary with locations and seasons, which renders the selection of spectral bands challenging. Accordingly, this study proposes an optimization process utilizing available spectral models to achieve optimal Chl-a retrieval. The method begins with the generation of a set of feature candidates, followed by candidate selection and optimization. Each candidate links to a Chl-a estimation model, including two-band, three-band, and normalized different chlorophyll index models. Moreover, a set of selected candidates using available spectral bands implies an optimal composition of estimation models, which results in an optimal Chl-a estimation. Remote sensing images and in situ Chl-a measurements in Lake Kasumigaura, Japan, are analyzed quantitatively and qualitatively to evaluate the proposed method. Results indicate that the model outperforms related Chl-a estimation models. The root-mean-squared errors of the Chl-a concentration obtained by the resulting model (OptiM-3) improve from 11.95 mg · m − 3 to 6.37 mg · m − 3 , and the Pearson’s correlation coefficients between the predicted and in situ Chl- a improve from 0.56 to 0.89.


Author(s):  
Jerrold L. Abraham

Inorganic particulate material of diverse types is present in the ambient and occupational environment, and exposure to such materials is a well recognized cause of some lung disease. To investigate the interaction of inhaled inorganic particulates with the lung it is necessary to obtain quantitative information on the particulate burden of lung tissue in a wide variety of situations. The vast majority of diagnostic and experimental tissue samples (biopsies and autopsies) are fixed with formaldehyde solutions, dehydrated with organic solvents and embedded in paraffin wax. Over the past 16 years, I have attempted to obtain maximal analytical use of such tissue with minimal preparative steps. Unique diagnostic and research data result from both qualitative and quantitative analyses of sections. Most of the data has been related to inhaled inorganic particulates in lungs, but the basic methods are applicable to any tissues. The preparations are primarily designed for SEM use, but they are stable for storage and transport to other laboratories and several other instruments (e.g., for SIMS techniques).


2001 ◽  
Vol 80 (3-4) ◽  
pp. 315-321 ◽  
Author(s):  
J.F. Cadorin ◽  
D. Jongmans ◽  
A. Plumier ◽  
T. Camelbeeck ◽  
S. Delaby ◽  
...  

AbstractTo provide quantitative information on the ground acceleration necessary to break speleothems, laboratory measurements on samples of stalagmite have been performed to study their failure in bending. Due to their high natural frequencies, speleothems can be considered as rigid bodies to seismic strong ground motion. Using this simple hypothesis and the determined mechanical properties (a minimum value of 0.4 MPa for the tensile failure stress has been considered), modelling indicates that horizontal acceleration ranging from 0.3 m/s2 to 100 m/s2 (0.03 to 10g) are necessary to break 35 broken speleothems of the Hotton cave for which the geometrical parameters have been determined. Thus, at the present time, a strong discrepancy exists between the peak accelerations observed during earthquakes and most of the calculated values necessary to break speleothems. One of the future research efforts will be to understand the reasons of the defined behaviour. It appears fundamental to perform measurements on in situ speleothems.


Sensors ◽  
2021 ◽  
Vol 21 (7) ◽  
pp. 2449
Author(s):  
Marion Baillieul ◽  
Emeline Baudet ◽  
Karine Michel ◽  
Jonathan Moreau ◽  
Petr Němec ◽  
...  

The objective of this study is to demonstrate the successful functionalization of the surface of a chalcogenide infrared waveguide with the ultimate goal of developing an infrared micro-sensor device. First, a polyisobutylene coating was selected by testing its physico-chemical compatibility with a Ge-Sb-Se selenide surface. To simulate the chalcogenide platform infrared sensor, the detection of benzene, toluene, and ortho-, meta- and para-xylenes was efficaciously performed using a polyisobutylene layer spin-coated on 1 and 2.5 µm co-sputtered selenide films of Ge28Sb12Se60 composition deposited on a zinc selenide prism used for attenuated total reflection spectroscopy. The thickness of the polymer coating was optimized by attenuated total reflection spectroscopy to achieve the highest possible attenuation of water absorption while maintaining the diffusion rate of the pollutant through the polymer film compatible with the targeted in situ analysis. Then, natural water, i.e., groundwater, wastewater, and seawater, was sampled for detection measurement by means of attenuated total reflection spectroscopy. This study is a valuable contribution concerning the functionalization by a hydrophobic polymer compatible with a chalcogenide optical sensor designed to operate in the mid-infrared spectral range to detect in situ organic molecules in natural water.


Sensors ◽  
2018 ◽  
Vol 18 (8) ◽  
pp. 2699 ◽  
Author(s):  
Jian Li ◽  
Liqiao Tian ◽  
Qingjun Song ◽  
Zhaohua Sun ◽  
Hongjing Yu ◽  
...  

Monitoring of water quality changes in highly dynamic inland lakes is frequently impeded by insufficient spatial and temporal coverage, for both field surveys and remote sensing methods. To track short-term variations of chlorophyll fluorescence and chlorophyll-a concentrations in Poyang Lake, the largest freshwater lake in China, high-frequency, in-situ, measurements were collected from two fixed stations. The K-mean clustering method was also applied to identify clusters with similar spatio-temporal variations, using remote sensing Chl-a data products from the MERIS satellite, taken from 2003 to 2012. Four lake area classes were obtained with distinct spatio-temporal patterns, two of which were selected for in situ measurement. Distinct daily periodic variations were observed, with peaks at approximately 3:00 PM and troughs at night or early morning. Short-term variations of chlorophyll fluorescence and Chl-a levels were revealed, with a maximum intra-diurnal ratio of 5.1 and inter-diurnal ratio of 7.4, respectively. Using geostatistical analysis, the temporal range of chlorophyll fluorescence and corresponding Chl-a variations was determined to be 9.6 h, which indicates that there is a temporal discrepancy between Chl-a variations and the sampling frequency of current satellite missions. An analysis of the optimal sampling strategies demonstrated that the influence of the sampling time on the mean Chl-a concentrations observed was higher than 25%, and the uncertainty of any single Terra/MODIS or Aqua/MODIS observation was approximately 15%. Therefore, sampling twice a day is essential to resolve Chl-a variations with a bias level of 10% or less. The results highlight short-term variations of critical water quality parameters in freshwater, and they help identify specific design requirements for geostationary earth observation missions, so that they can better address the challenges of monitoring complex coastal and inland environments around the world.


2020 ◽  
Author(s):  
Claus Pelikan ◽  
Kenneth Wasmund ◽  
Clemens Glombitza ◽  
Bela Hausmann ◽  
Craig W. Herbold ◽  
...  

AbstractMicroorganisms in marine sediments play major roles in marine biogeochemical cycles by mineralizing substantial quantities of organic matter from decaying cells. Proteins and lipids are abundant components of necromass, yet the taxonomic identities of microorganisms that actively degrade them remain poorly resolved. Here, we revealed identities, trophic interactions, and genomic features of bacteria that degraded 13C-labeled proteins and lipids in cold anoxic microcosms containing sulfidic subarctic marine sediment. Supplemented proteins and lipids were rapidly fermented to various volatile fatty acids within 5 days. DNA-stable isotope probing (SIP) suggested Psychrilyobacter atlanticus was an important primary degrader of proteins, and Psychromonas members were important primary degraders of both proteins and lipids. Closely related Psychromonas populations, as represented by distinct 16S rRNA gene variants, differentially utilized either proteins or lipids. DNA-SIP also showed 13C-labeling of various Deltaproteobacteria within 10 days, indicating trophic transfer of carbon to putative sulfate-reducers. Metagenome-assembled genomes revealed the primary hydrolyzers encoded secreted peptidases or lipases, and enzymes for catabolism of protein or lipid degradation products. Psychromonas species are prevalent in diverse marine sediments, suggesting they are important players in organic carbon processing in situ. Together, this study provides new insights into the identities, functions, and genomes of bacteria that actively degrade abundant necromass macromolecules in the seafloor.


2007 ◽  
Vol 4 (4) ◽  
pp. 2441-2491 ◽  
Author(s):  
M. S. Twardowski ◽  
H. Claustre ◽  
S. A. Freeman ◽  
D. Stramski ◽  
Y. Huot

Abstract. During the BIOSOPE field campaign October–December 2004, measurements of inherent optical properties from the surface to 500 m depth were made with a ship profiler at stations covering over ~8000 km through the Southeast Pacific Ocean. Data from a ~3000 km section containing the very clearest waters in the central gyre are reported here. The total volume scattering function at 117°, βt(117°), was measured with a WET Labs ECO-BB3 sensor at 462, 532, and 650 nm with estimated uncertainties of 2×10−5, 5×10−6, and 2×10−6 m−1 sr−1, respectively. These values were approximately 6%, 3%, and 3% of the scattering by pure seawater at their respective wavelengths. From a methodological perspective, there were several results: – bbp distributions were resolvable even though some of the values from the central gyre were an order of magnitude lower than the lowest previous measurements in the literature; – Direct in-situ measurements of instrument dark offsets were necessary to accurately resolve backscattering at these low levels; – accurate pure seawater backscattering values are critical in determining particulate backscattering coefficients in the open ocean (not only in these very clear waters); the pure water scattering values determined by Buiteveld et al. (1994) with a [1 + 0.3S/37] adjustment for salinity based on Morel (1974) appear to be the most accurate estimates, with aggregate accuracies as low as a few percent; and – closure was demonstrated with subsurface reflectance measurements reported by Morel et al. (2007) within instrument precisions, a useful factor in validating the backscattering measurements. This methodology enabled several observations with respect to the hydrography and the use of backscattering as a biogeochemical proxy: – The clearest waters sampled were found at depths between 300 and 350 m, from 23.5° S, 118° W to 26° S, 114° W, where total backscattering at 650 nm was not distinguishable from pure seawater; – Distributions of particulate backscattering bbp across the central gyre exhibited a broad particle peak centered ~100 m; – The particulate backscattering ratio typically ranged between 0.4% and 0.6% through the majority of the central gyre from the surface to ~210 m, indicative of "soft" water-filled particles with low bulk refractive index; and – bbp at 532 and 650 nm showed a distinct secondary deeper layer centered ~230 m that was absent in particulate attenuation cp data. The particulate backscattering ratio was significantly higher in this layer than in the rest of the water column, reaching 1.2% in some locations. This high relative backscattering, along with the pigment composition and ecological niche of this layer, appear to be consistent with the coccolithophorid F. profunda. Moreover, results were consistent with several expectations extrapolated from theory and previous work in oceanic and coastal regions, supporting the conclusion that particulate and total backscattering could be resolved in these extremely clear natural waters.


Holzforschung ◽  
2002 ◽  
Vol 56 (2) ◽  
pp. 199-208 ◽  
Author(s):  
Thomas Rosenau ◽  
Antje Potthast ◽  
Andreas Hofinger ◽  
Herbert Sixta ◽  
Paul Kosma

Summary Polonowski type degradation reactions are a major reason for the frequently observed instability of solutions of cellulose in N-methylmorpholine-N-oxide monohydrate (NMMO, 1). The degradation is induced by degradation products of cellulose and NMMO generated in situ in the Lyocell system. The presence of both an amine component, such as morpholine or N-methylmorpholine, and an acid component is required for the decomposition process to proceed. The latter might be a low-molecular-weight compound, such as formic acid, acetic acid or gluconic acid, or also a high-molecular-weight acid, such as polyglucuronic acid or ion exchange resin.


2012 ◽  
Vol 69 (2) ◽  
pp. 369-381 ◽  
Author(s):  
Sonya M. Havens ◽  
Christel S. Hassler ◽  
Rebecca L. North ◽  
Stephanie J. Guildford ◽  
Greg Silsbe ◽  
...  

Phytoplankton interactions with iron (Fe) were examined in surface waters of Lake Erie during summer thermal stratification. Lake-wide sampling in June and September 2005 was conducted using a continuous surface water sampler (1 m sampling depth) and in July at 18 hydrographic stations (5 m sampling depth). In situ measurements of photosynthetic efficiency (maximum quantum yield of photosystem II) and phytoplankton community composition were measured using fast repetition rate fluorometry and a phytoplankton pigment-specific fluorometer, respectively, during June and September. High ratios (73%–85%) of intracellular Fe to particulate Fe coincident with increases in chlorophyll a (Chl a) concentrations in the western and central basins in June and July imply that the majority of Fe in these regions was associated with intracellular pools. Correlations between intracellular Fe and Chl a were frequently observed when Heterokontophyta and Pyrrophyta dominated the phytoplankton community. Assimilation of Fe by the phytoplankton strongly influenced its partitioning between the dissolved and particulate phase. Dissolved iron (<0.45 µm) concentrations were proportional to Chl a concentrations and both dissolved iron and Chl a were inversely proportional to nitrate concentrations in July and September, suggesting that dissolved iron influenced both nitrate drawdown and Chl a concentrations in Lake Erie surface waters in summer.


2020 ◽  
Vol 53 (4) ◽  
pp. 1163-1166
Author(s):  
Karsten Mesecke ◽  
Winfried Malorny ◽  
Laurence N. Warr

This note describes an autoclave chamber developed and constructed by Anton Paar and its application for in situ experiments under hydrothermal conditions. Reactions of crystalline phases can be studied by successive in situ measurements on a conventional laboratory X-ray diffractometer with Bragg–Brentano geometry at temperatures <483 K and saturated vapour pressure <2 MPa. Variations in the intensity of X-ray diffraction reflections of both reactants and products provide quantitative information for studying the reaction kinetics of both dissolution and crystal growth. Feasibility is demonstrated by studying a cementitious mixture used for autoclaved aerated concrete production. During a period of 5.7 h at 466 K and 1.35 MPa, the crystallization of torbermorite and the partial consumption of quartz were monitored.


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