scholarly journals Antibiotic resistance levels in soils from urban and rural land uses in Great Britain

2020 ◽  
Author(s):  
Kieran Osbiston ◽  
Anne Oxbrough ◽  
Lorena Teresa Fernández-Martínez
Keyword(s):  
Land Use ◽  
Antibiotic Resistance ◽  
Great Britain ◽  
Community Dynamics ◽  
Agricultural Land ◽  
Animal Health ◽  
Resistant Bacteria ◽  
Land Uses ◽  
Microbial Community Dynamics ◽  
Significant Difference

Although soil is one of the largest microbial diversity reservoirs, the processes that define its microbial community dynamics are not fully understood. Improving our understanding of the levels of antibiotic resistance in soils with different land uses in Great Britain is not only important for the protection of animal health (including humans), but also for gaining an insight into gene transfer levels in microbial communities. This study looked at the levels of antibiotic-resistant bacteria (ARB) able to survive inhibitory concentrations of chloramphenicol, erythromycin and vancomycin, as well as subinhibitory (10 µg ml−1) erythromycin concentrations. Soils from nine different sites across Great Britain with three distinct land uses (agricultural, urban and semi-natural) were sampled and the percentage of ARB was calculated for each site. Statistical analyses confirmed a significant difference in the level of ARB found in agricultural land compared to urban or semi-natural sites. The results also showed that resistance levels to vancomycin and chloramphenicol in the agricultural and urban sites sampled were significantly higher than those for erythromycin, whilst in semi-natural sites all three antibiotics show similar resistance levels. Finally, although the levels of resistance to a subinhibitory (10 µg ml−1) erythromycin concentration were significantly higher across land use types when compared to the levels of resistance to an inhibitory (20 µg ml−1) concentration, these were much less marked in soil from agricultural land compared to that from urban or semi-natural land use soil.

Antibiotic resistance in grass and soil

2019 ◽  
Vol 47 (1) ◽  
pp. 477-486 ◽  
Author(s):  
Ciara Tyrrell ◽  
Catherine M. Burgess ◽  
Fiona P. Brennan ◽  
Fiona Walsh
Keyword(s):  
Antibiotic Resistance ◽  
Human Health ◽  
Agricultural Land ◽  
Animal Health ◽  
Antibiotic Resistance Genes ◽  
Animal Husbandry ◽  
Soil Microbiome ◽  
Resistant Bacteria ◽  
Manure Application ◽  
The Impact

Abstract Antibiotic resistance is currently one of the greatest threats to human health. The global overuse of antibiotics in human medicine and in agriculture has resulted in the proliferation and dissemination of a multitude of antibiotic resistance genes (ARGs). Despite a large proportion of antibiotics being used in agriculture, little is understood about how this may contribute to the overall antibiotic resistance crisis. The use of manure in agriculture is a traditional and widespread practice and is essential for returning nutrients to the soil; however, the impact of continuous manure application on the environmental microbiome and resistome is unknown. The use of antibiotics in animal husbandry in therapeutic and sub-therapeutic doses creates a selective pressure for ARGs in the gut microbiome of the animal, which is then excreted in the faeces. Therefore, the application of manure to agricultural land is a potential route for the transmission of antibiotic-resistant bacteria from livestock to crops, animals and humans. It is of vital importance to understand the mechanisms behind ARG enrichment and its maintenance both on the plant and within the soil microbiome to mitigate the spread of this resistance to animals and humans. Understanding this link between human health, animal health, plant health and the environment is crucial to inform implementation of new regulations and practice regarding antibiotic use in agriculture and manure application, aimed at ensuring the antibiotic resistance crisis is not aggravated.

scholarly journals Changes in Coastal Agricultural Land Use in Response to Climate Change: An Assessment Using Satellite Remote Sensing and Household Survey Data in Tien Hai District, Thai Binh Province, Vietnam

Land ◽  
2021 ◽  
Vol 10 (6) ◽  
pp. 627
Author(s):  
Duong H. Nong ◽  
An T. Ngo ◽  
Hoa P. T. Nguyen ◽  
Thuy T. Nguyen ◽  
Lan T. Nguyen ◽  
...  
Keyword(s):  
Climate Change ◽  
Land Use ◽  
Agricultural Land ◽  
Land Use Changes ◽  
Management Strategies ◽  
Household Survey ◽  
Extreme Weather Events ◽  
Agricultural Land Use ◽  
Landsat 8 ◽  
Land Uses

We analyzed the agricultural land-use changes in the coastal areas of Tien Hai district, Thai Binh province, in 2005, 2010, 2015, and 2020, using Landsat 5 and Landsat 8 data. We used the object-oriented classification method with the maximum likelihood algorithm to classify six types of land uses. The series of land-use maps we produced had an overall accuracy of more than 80%. We then conducted a spatial analysis of the 5-year land-use change using ArcGIS software. In addition, we surveyed 150 farm households using a structured questionnaire regarding the impacts of climate change on agricultural productivity and land uses, as well as farmers’ adaptation and responses. The results showed that from 2005 to 2020, cropland decreased, while aquaculture land and forest land increased. We observed that the most remarkable decreases were in the area of rice (485.58 ha), the area of perennial crops (109.7 ha), and the area of non-agricultural land (747.35 ha). The area of land used for aquaculture and forest increased by 566.88 ha and 772.60 ha, respectively. We found that the manifestations of climate change, such as extreme weather events, saltwater intrusion, drought, and floods, have had a profound impact on agricultural production and land uses in the district, especially for annual crops and aquaculture. The results provide useful information for state authorities to design land-management strategies and solutions that are economic and effective in adapting to climate change.

scholarly journals Comparison of Antibiotic Resistance Profile of Escherichia coli between Pristine and Human-Impacted Sites in a River

Antibiotics ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 575
Author(s):  
Emi Nishimura ◽  
Masateru Nishiyama ◽  
Kei Nukazawa ◽  
Yoshihiro Suzuki
Keyword(s):  
Escherichia Coli ◽  
Antibiotic Resistance ◽  
Resistant Bacteria ◽  
Downstream Site ◽  
Antibiotic Resistant Bacteria ◽  
Antibiotic Resistant ◽  
Upstream Site ◽  
Resistance Profile ◽  
Antibiotic Resistance Profile ◽  
Significant Difference

Information on the actual existence of antibiotic-resistant bacteria in rivers where sewage, urban wastewater, and livestock wastewater do not load is essential to prevent the spread of antibiotic-resistant bacteria in water environments. This study compared the antibiotic resistance profile of Escherichia coli upstream and downstream of human habitation. The survey was conducted in the summer, winter, and spring seasons. Resistance to one or more antibiotics at upstream and downstream sites was on average 18% and 20%, respectively, and no significant difference was observed between the survey sites. The resistance rates at the upstream site (total of 98 isolated strains) to each antibiotic were cefazolin 17%, tetracycline 12%, and ampicillin 8%, in descending order. Conversely, for the downstream site (total of 89 isolated strains), the rates were ampicillin 16%, cefazolin 16%, and tetracycline 1% in descending order. The resistance rate of tetracycline in the downstream site was significantly lower than that of the upstream site. Furthermore, phylogenetic analysis revealed that many strains showed different resistance profiles even in the same cluster of the Pulsed-Field Gel Electrophoresis (PFGE) pattern. Moreover, the resistance profiles differed in the same cluster of the upstream and the downstream sites. In flowing from the upstream to the downstream site, it is plausible that E. coli transmitted or lacked the antibiotic resistance gene.

scholarly journals Soil microbial community dynamics and assembly under long-term land use change

2017 ◽  
Vol 93 (10) ◽  
Author(s):  
Dennis Goss-Souza ◽  
Lucas William Mendes ◽  
Clovis Daniel Borges ◽  
Dilmar Baretta ◽  
Siu Mui Tsai ◽  
...  
Keyword(s):  
Land Use ◽  
Microbial Community ◽  
Land Use Change ◽  
Soil Microbial Community ◽  
Community Dynamics ◽  
Soil Microbial ◽  
Microbial Community Dynamics

scholarly journals Estimating Human Impacts on Soil Erosion Considering Different Hillslope Inclinations and Land Uses in the Coastal Region of Syria

Water ◽  
2020 ◽  
Vol 12 (10) ◽  
pp. 2786 ◽  
Author(s):  
Safwan Mohammed ◽  
Hazem G. Abdo ◽  
Szilard Szabo ◽  
Quoc Bao Pham ◽  
Imre J. Holb ◽  
...  
Keyword(s):  
Land Use ◽  
Soil Erosion ◽  
Land Cover ◽  
Soil Loss ◽  
Agricultural Land ◽  
Human Impacts ◽  
Coastal Region ◽  
Water Erosion ◽  
Land Uses ◽  
Erosion Processes

Soils in the coastal region of Syria (CRoS) are one of the most fragile components of natural ecosystems. However, they are adversely affected by water erosion processes after extreme land cover modifications such as wildfires or intensive agricultural activities. The main goal of this research was to clarify the dynamic interaction between erosion processes and different ecosystem components (inclination, land cover/land use, and rainy storms) along with the vulnerable territory of the CRoS. Experiments were carried out in five different locations using a total of 15 erosion plots. Soil loss and runoff were quantified in each experimental plot, considering different inclinations and land uses (agricultural land (AG), burnt forest (BF), forest/control plot (F)). Observed runoff and soil loss varied greatly according to both inclination and land cover after 750 mm of rainfall (26 events). In the cultivated areas, the average soil water erosion ranged between 0.14 ± 0.07 and 0.74 ± 0.33 kg/m2; in the BF plots, mean soil erosion ranged between 0.03 ± 0.01 and 0.24 ± 0.10 kg/m2. The lowest amount of erosion was recorded in the F plots where the erosion ranged between 0.1 ± 0.001 and 0.07 ± 0.03 kg/m2. Interestingly, the General Linear Model revealed that all factors (i.e., inclination, rainfall and land use) had a significant (p < 0.001) effect on the soil loss. We concluded that human activities greatly influenced soil erosion rates, being higher in the AG lands, followed by BF and F. Therefore, the current study could be very useful to policymakers and planners for proposing immediate conservation or restoration plans in a less studied area which has been shown to be vulnerable to soil erosion processes.

scholarly journals Quantifying gross vs. net agricultural land use change in Great Britain using the Integrated Administration and Control System

2018 ◽  
Vol 628-629 ◽  
pp. 1234-1248 ◽  
Author(s):  
Samuel J. Tomlinson ◽  
Ulrike Dragosits ◽  
Peter E. Levy ◽  
Amanda M. Thomson ◽  
Janet Moxley
Keyword(s):  
Land Use ◽  
Control System ◽  
Great Britain ◽  
Land Use Change ◽  
Agricultural Land ◽  
Agricultural Land Use ◽  
And Control

Integrating agricultural land-use and management for conservation of a native grassland flora in a variegated landscape

1994 ◽  
Vol 1 (3) ◽  
pp. 236 ◽  
Author(s):  
S. McIntyre
Keyword(s):  
Land Use ◽  
New England ◽  
Agricultural Land ◽  
Planning Process ◽  
Regional Scale ◽  
Spatial Arrangement ◽  
Soil Disturbance ◽  
Land Uses ◽  
The Matrix ◽  
Land Use And Management

Management of variegated landscapes (in which the native vegetation still forms the matrix but has been modified in a variable way) requires strategies to maintain or enhance existing vegetation within the context of human land-uses such as agriculture. Using rangelands in the New England region of New South Wales as an example, spatial patterns of land-use and modification are described. Management principles for conservation of herbaceous communities in areas of pastoral production are suggested, based on the following assumptions: 1) low intensity pasture utilization and management (i.e., limited fertilization, soil disturbance and grazing) is conducive to the maintenance of species richness at a local and regional scale; 2) stratification of management intensity on farms is compatible with viable grazing operations; 3) landscape context is important as effects of management may spread beyond the managed area; 4) spatial arrangement of land-uses could be optimized to maintain or increase diversity. Although our understanding of these issues is incomplete, there is general observational and theoretical support for them. Incorporation of principles derived from these assumptions in the farm planning process is a useful strategy for preserving grassland vegetation in landscapes where opportunities for reserve conservation are limited.

scholarly journals Characterization of antibiotic resistance genes in the species of the rumen microbiota

2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Yasmin Neves Vieira Sabino ◽  
Mateus Ferreira Santana ◽  
Linda Boniface Oyama ◽  
Fernanda Godoy Santos ◽  
Ana Júlia Silva Moreira ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Resistance Genes ◽  
Animal Health ◽  
Antibiotic Resistance Genes ◽  
Tetracycline Resistance ◽  
Multidrug Resistant ◽  
Resistant Bacteria ◽  
Ruminal Bacteria ◽  
Genes Encoding

AbstractInfections caused by multidrug resistant bacteria represent a therapeutic challenge both in clinical settings and in livestock production, but the prevalence of antibiotic resistance genes among the species of bacteria that colonize the gastrointestinal tract of ruminants is not well characterized. Here, we investigate the resistome of 435 ruminal microbial genomes in silico and confirm representative phenotypes in vitro. We find a high abundance of genes encoding tetracycline resistance and evidence that the tet(W) gene is under positive selective pressure. Our findings reveal that tet(W) is located in a novel integrative and conjugative element in several ruminal bacterial genomes. Analyses of rumen microbial metatranscriptomes confirm the expression of the most abundant antibiotic resistance genes. Our data provide insight into antibiotic resistange gene profiles of the main species of ruminal bacteria and reveal the potential role of mobile genetic elements in shaping the resistome of the rumen microbiome, with implications for human and animal health.

scholarly journals Land Use Changes Affecting Soil Organic Matter Accumulation in Topsoil and Subsoil in Northeast Thailand

2020 ◽  
Vol 2020 ◽  
pp. 1-15
Author(s):  
Benjapon Kunlanit ◽  
Laksanara Khwanchum ◽  
Patma Vityakon
Keyword(s):  
Land Use ◽  
Organic Matter ◽  
Soil Organic Matter ◽  
Agricultural Land ◽  
Soil Depth ◽  
General Pattern ◽  
Clay Fraction ◽  
High Rate ◽  
Soil Profiles ◽  
Land Uses

The objectives of this study were to investigate effects of land use on accumulation of soil organic matter (SOM) in the soil profile (0–100 cm) and to determine pattern of SOM stock distribution in soil profiles. Soil samples were collected from five soil depths at 20 cm intervals from 0 to 100 cm under four adjacent land uses including forest, cassava, sugarcane, and paddy lands located in six districts of Maha Sarakham province in the Northeast of Thailand. When considering SOM stock among different land uses in all locations, forest soils had significantly higher total SOM stocks in 0–100 cm (193 Mg·C·ha−1) than those in cassava, sugarcane, and paddy soils in all locations. Leaf litter and remaining rice stover on soil surfaces resulted in a higher amount of SOM stocks in topsoil (0–20 cm) than subsoil (20–100 cm) in some forest and paddy land uses. General pattern of SOM stock distribution in soil profiles was such that the SOM stock declined with soil depth. Although SOM stocks decreased with depth, the subsoil stock contributes to longer term storage of C than topsoils as they are more stabilized through adsorption onto clay fraction in finer textured subsoil than those of the topsoils. Agricultural practices, notably applications of organic materials, such as cattle manure, could increase subsoil SOM stock as found in some agricultural land uses (cassava and sugarcane) in some location in our study. Upland agricultural land uses, notably cassava, caused high rate of soil degradation. To restore soil fertility of these agricultural lands, appropriate agronomic practices including application of organic soil amendments, return of crop residues, and reduction of soil disturbance to increase and maintain SOM stock, should be practiced.

scholarly journals Agricultural Expansion-Induced Infiltration Rate Change in a West African Tropical Catchment

2019 ◽  
Vol 2019 ◽  
pp. 1-9
Author(s):  
Yacouba Yira ◽  
Aymar Y. Bossa
Keyword(s):  
Land Use ◽  
Bulk Density ◽  
Agricultural Land ◽  
Infiltration Rate ◽  
West African ◽  
Water Dynamics ◽  
Saturation State ◽  
Fertility Reduction ◽  
Significant Difference ◽  
Agricultural Land Expansion

Land use and land cover in the Dano catchment is characterized by a rapid conversion from seminatural vegetation (fallow) to agriculture (cropland). The study compares both the saturated (Ks) and the unsaturated (Kh) hydraulic conductivities under cropland and fallow in the catchment to gain insights into the effect of the current land use on soil water dynamics. Hydraulic conductivity was measured under forty-two (42) pairs of adjacent cropland-fallow plots using a Hood infiltrometer. Ks, Kh, bulk density, and soil texture were further compared using a paired two-tailed Student’s t-test (p=0.05). The results showed that both Ks and Kh are highly variable irrespective of the land use type (coefficient of variation > 100%). The results also showed that Ks was significantly higher (1.16-fold on average) under fallow compared to cropland. As for Kh, the results showed that, from −2 cm to zero tension heads (h), Kh under cropland and fallow is not significantly different; however, as the supplied tension decreases up to the saturation state, Kh under fallow becomes statistically higher compared to cropland. No significant difference was found between soil textures and bulk density under cropland and fallow meaning that the observed differences of Ks and Kh under cropland and fallow were caused by land use and not preexisting difference in texture. These results suggest an increasing risk of erosion, soil fertility reduction, and flood in the catchment because of agricultural land expansion.

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