Toward a revision of the bamboo corals: Part 3, deconstructing the Family Isididae

Zootaxa ◽  
2021 ◽  
Vol 5047 (3) ◽  
pp. 247-272
Author(s):  
ESPRIT HEESTAND SAUCIER ◽  
SCOTT C. FRANCE ◽  
LES WATLING
Keyword(s):  
Calcium Carbonate ◽  
Evolutionary History ◽  
The Other ◽  
Genetic Analyses ◽  
The Family ◽  
Family Level ◽  
Current Classification ◽  
History Of

Bamboo corals are distinguished from most other octocorals by an articulated skeleton. The nodes are proteinaceous and sclerite-free while the internodes are composed of non-scleritic calcium carbonate. This articulation of the skeleton was thought to be unique and a strong synapomorphy for the family Isididae. Our phylogeny, based on the amplification of mtMutS and 18S, shows an articulating skeleton with sclerite-free nodes has arisen independently at least five times during the evolutionary history of Octocorallia rather than being a synapomorphy characteristic of a monophyletic bamboo coral clade. The family Isididae is currently composed of four subfamilies (Circinisidinae, Isidinae, Keratoisidinae, and Mopseinae). Not only is the family polyphyletic, but our genetic analyses suggest also the subfamily Isidinae is polyphyletic based on current taxonomic classifications, and Mopseinae is not monophyletic. The type, Isis, is found outside of the well-supported Calcaxonia – Pennatulacea clade where the other members of Isididae cluster. The current classification of the family Isididae does not reflect the evolutionary history of an articulated skeleton. To better reflect the evolutionary history of these taxa we propose that three of the four the subfamilies, the genus Isidoides, and genera within the subfamily Isidinae, be elevated to family level to produce a classification with five families with a bamboo-like skeleton: Chelidonisididae, Isididae, Isidoidae, Keratoisididae, and Mopseidae.  

scholarly journals Ancient origins and multiple appearances of carotenoid-pigmented feathers in birds

2014 ◽  
Vol 281 (1788) ◽  
pp. 20140806 ◽  
Author(s):  
Daniel B. Thomas ◽  
Kevin J. McGraw ◽  
Michael W. Butler ◽  
Matthew T. Carrano ◽  
Odile Madden ◽  
...  
Keyword(s):  
Raman Spectroscopy ◽  
High Performance ◽  
Evolutionary History ◽  
Carotenoid Pigments ◽  
Biological Functions ◽  
The Family ◽  
Family Level ◽  
History Of ◽  
Living Species ◽  
Insight Into

The broad palette of feather colours displayed by birds serves diverse biological functions, including communication and camouflage. Fossil feathers provide evidence that some avian colours, like black and brown melanins, have existed for at least 160 million years (Myr), but no traces of bright carotenoid pigments in ancient feathers have been reported. Insight into the evolutionary history of plumage carotenoids may instead be gained from living species. We visually surveyed modern birds for carotenoid-consistent plumage colours (present in 2956 of 9993 species). We then used high-performance liquid chromatography and Raman spectroscopy to chemically assess the family-level distribution of plumage carotenoids, confirming their presence in 95 of 236 extant bird families (only 36 family-level occurrences had been confirmed previously). Using our data for all modern birds, we modelled the evolutionary history of carotenoid-consistent plumage colours on recent supertrees. Results support multiple independent origins of carotenoid plumage pigmentation in 13 orders, including six orders without previous reports of plumage carotenoids. Based on time calibrations from the supertree, the number of avian families displaying plumage carotenoids increased throughout the Cenozoic, and most plumage carotenoid originations occurred after the Miocene Epoch (23 Myr). The earliest origination of plumage carotenoids was reconstructed within Passeriformes, during the Palaeocene Epoch (66–56 Myr), and not at the base of crown-lineage birds.

The shared evolutionary history of kinship classifications and language

2010 ◽  
Vol 33 (5) ◽  
pp. 402-403 ◽  
Author(s):  
Robert M. Seyfarth ◽  
Dorothy L. Cheney
Keyword(s):  
Human Evolution ◽  
Evolutionary History ◽  
The Other ◽  
History Of ◽  
System Maps

AbstractAmong monkeys and apes, both the recognition and classification of individuals and the recognition and classification of vocalizations constitute discrete combinatorial systems. One system maps onto the other, suggesting that during human evolution kinship classifications and language shared a common cognitive precursor.

scholarly journals Monophyly, Taxon Sampling, and the Nature of Ranks in the Classification of Orb-Weaving Spiders (Araneae: Araneoidea)

2019 ◽  
Author(s):  
Robert J Kallal ◽  
Dimitar Dimitrov ◽  
Miquel A Arnedo ◽  
Gonzalo Giribet ◽  
Gustavo Hormiga
Keyword(s):  
Evolutionary History ◽  
Sexual Size Dimorphism ◽  
Sister Group ◽  
Taxon Sampling ◽  
Sexually Dimorphic ◽  
The Family ◽  
History Of ◽  
Dated Phylogeny ◽  
Fundamental Requirement

Abstract We address some of the taxonomic and classification changes proposed by Kuntner et al. (2019) in a comparative study on the evolution of sexual size dimorphism in nephiline spiders. Their proposal to recircumscribe araneids and to rank the subfamily Nephilinae as a family is fundamentally flawed as it renders the family Araneidae paraphyletic. We discuss the importance of monophyly, outgroup selection, and taxon sampling, the subjectivity of ranks, and the implications of the age of origin criterion to assign categorical ranks in biological classifications. We explore the outcome of applying the approach of Kuntner et al. (2019) to the classification of spiders with emphasis on the ecribellate orb-weavers (Araneoidea) using a recently published dated phylogeny. We discuss the implications of including the putative sister group of Nephilinae (the sexually dimorphic genus Paraplectanoides) and the putative sister group of Araneidae (the miniature, monomorphic family Theridiosomatidae). We propose continuation of the phylogenetic classification put forth by Dimitrov et al. (2017), and we formally rank Nephilinae and Phonognathinae as subfamilies of Araneidae. Our classification better reflects the understanding of the phylogenetic placement and evolutionary history of nephilines and phonognathines while maintaining the diagnosability of Nephilinae. It also fulfills the fundamental requirement that taxa must be monophyletic, and thus avoids the paraphyly of Araneidae implied by Kuntner et al. (2019).

Organogénie de la feuille du Begonia radicans Vellozo et du Begonia scabrida (Begoniaceae)

1992 ◽  
Vol 70 (6) ◽  
pp. 1107-1122 ◽  
Author(s):  
Denis Barabé ◽  
Luc Brouillet ◽  
Charles Bertrand
Keyword(s):  
Key Words ◽  
Evolutionary History ◽  
Leaf Primordia ◽  
Mature Leaf ◽  
The Other ◽  
Leaf Morphogenesis ◽  
Angiosperm Phylogeny ◽  
The Family ◽  
History Of ◽  
Plesiomorphic State

The asymmetrical leaf of Begonia raises both biological and mathematical questions. The leaf organogenesis of two species of Begonia is analyzed in this study, one with asymmetrical, palmately nerved leaves, Begonia scabrida A.DC, the other with quasi-symmetrical, pinnately nerved leaves, Begonia radicans Vellozo. Additional observations on Begonia fagifolia Fischer, a species of the second type, are included for comparison. In the three species studied, the leaf primordia are asymmetrical at initiation, notwithstanding mature leaf symmetry or nervation. In B. radicans, the leaf is asymmetrical at initiation and becomes quasi-symmetrical, while in B. scabrida, it remains asymmetrical throughout. The Begonia leaf thus represents a true case of asymmetry, related to the morphogenetic properties of the vegetative apex. None of the present theories of leaf organogenesis are able to fully account for this phenomenon. Leaf asymmetry represents an ontogenetic constraint in the evolutionary history of Begoniaceae. The hypothesis is presented that the palmately nerved leaf is a plesiomorphic state and the pinnately nerved leaf an apomorphic one that appeared repeatedly within the family. Key words: Begoniaceae, leaf, morphogenesis, angiosperm, phylogeny, apex.

Systematic evidence from gene duplication and regulation

1990 ◽  
Vol 3 (1) ◽  
pp. 145
Author(s):  
DJ Colgan
Keyword(s):  
Gene Duplication ◽  
Evolutionary History ◽  
Tandem Duplication ◽  
Fragment Length Polymorphism ◽  
Duplicate Genes ◽  
Polymorphism Analysis ◽  
Multiple Origins ◽  
The Family ◽  
History Of ◽  
Phylogenetic Hypotheses

This paper is a review of the use of information regarding the presence of duplicate genes and their regulation in systematics. The review concentrates on data derived from protein electrophoresis and restriction fragment length polymorphism analysis. The appearance of a duplication in a subset of a group of species implies that the members of the subset belong to the same clade. Suppression of the duplication may render this clade apparently paraphyletic, but may itself be informative of relations within the lineage through patterns of loss of expression in all, or some tissues, or through restrictions of the formation of functional heteropolymers in polymeric enzymes. Examples are given of studies which have used such information to establish phylogenetic hypotheses at the family level, to identify an auto- or allo-polyploid origin of polyploid species and to determine whether there have been single or multiple origins of such species. The likelihood of homoplasy in the patterns of appearance and regulation of duplicates depends on the molecular basis of the duplication. In particular, the contrast between the expected consequences of tandem duplication and the expression of pseudogenes emphasises the value of determining the mechanism of the original duplication. Many instances of sporadic gene duplication are now known, and polyploidisation is a common event in the evolutionary history of both plants and animals. So the opportunities to discover duplicationrelated characters will arise in many systematic studies. A program is presented to increase the chances that such useful information will be recognisable during the studies.

Phanerozoic trends in the global geographic disparity of marine biotas

Paleobiology ◽  
2009 ◽  
Vol 35 (4) ◽  
pp. 612-630 ◽  
Author(s):  
Arnold I. Miller ◽  
Devin P. Buick ◽  
Katherine V. Bulinski ◽  
Chad A. Ferguson ◽  
Austin J. W. Hendy ◽  
...  
Keyword(s):  
Geographic Distance ◽  
Marine Biodiversity ◽  
Marine Animal ◽  
Animal Life ◽  
Data Repositories ◽  
Geographic Disparity ◽  
The Family ◽  
Family Level ◽  
History Of

Previous analyses of the history of Phanerozoic marine biodiversity suggested that the post-Paleozoic increase observed at the family level and below was caused, in part, by an increase in global provinciality associated with the breakup of Pangea. Efforts to characterize the Phanerozoic history of provinciality, however, have been compromised by interval-to-interval variations in the methods and standards used by researchers to calibrate the number of provinces. With the development of comprehensive, occurrence-based data repositories such as the Paleobiology Database (PaleoDB), it is now possible to analyze directly the degree of global compositional disparity as a function of geographic distance (geo-disparity) and changes thereof throughout the history of marine animal life. Here, we present a protocol for assessing the Phanerozoic history of geo-disparity, and we apply it to stratigraphic bins arrayed throughout the Phanerozoic for which data were accessed from the PaleoDB. Our analyses provide no indication of a secular Phanerozoic increase in geo-disparity. Furthermore, fundamental characteristics of geo-disparity may have changed from era to era in concert with changes to marine venues, although these patterns will require further scrutiny in future investigations.

scholarly journals I.—Notes on the Phylogeny of the Graptolites

1895 ◽  
Vol 2 (12) ◽  
pp. 529-539 ◽  
Author(s):  
H. A. Nicholson ◽  
J. E. Marr
Keyword(s):  
Present State ◽  
The Other ◽  
Other Hand ◽  
The Family ◽  
The Future ◽  
Geological Magazine

Since the remarkable paper by Professor Lapworth “On an Improved Classification of the Rhabdophora” was published in the Geological Magazine for 1873, a great deal of fresh information has been gathered as to these interesting fossils; but the classification given in that paper, though to some extent confessedly artificial, is still generally adhered to. Observations made by the authors in recent years lead them to suppose that that classification will in the future undergo considerable modification; but in the present state of our knowledge it serves a purpose so useful, that it is not our intention to propose any immediate change in it. Our object, on the other hand, is to bring forward certain conclusions which we have independently reached, and which will, we believe, enhance the value of Graptolites to the stratigraphical geologist, and lead to results important to the biologist. Our conclusions are based upon an examination of a large number of forms generally referred to the family Dichograptidæ; but, as we propose very briefly to indicate, they affect the relationships of Graptolites belonging to other families also.

scholarly journals A Comparative Study of Plasma Proteins from Twenty-Nine Species of Albatrosses And Petrels (Order Procellariiformes)

2021 ◽  
Author(s):  
◽  
Peter C Harper
Keyword(s):  
Plasma Proteins ◽  
Species Group ◽  
Reference Points ◽  
Evolutionary Significance ◽  
Group Level ◽  
Family Level ◽  
Phylogenetic Conservatism ◽  
History Of ◽  
Biochemical Research

<p>The plasma proteins of 29 species of albatrosses and petrels were electrophoretically separated in acrylamide gels to clarify relationships at the species-group to family-group levels. Little in the resulting data from 472 birds seriously contests the present classification of the Procellariiformes; much of the biochemical evidence supports, confirms, and clarifies the proposals of conventional taxonomic methodology. The biochemical data give fresh insights into the interrelationships of procellariiform taxa, and highlight intriguing new problems. Sex, season, age, and other sources of non-genetic protein variation are insignificant for taxonomic purposes. Proteins of comparable value include the transferrins, some α and β globulins, albumins, prealbumins, and non-specific esterases. Genetic variations in the mobility of these proteins are useful at the genus-group level and below. Other proteins are monomorphic at genus and family level, and three are monomorphic in both number and mobility throughout the Procellariiformes; these are useful reference points for calibrating samples on different gels. One conspicuous α protein is absent in the Hydrobatidae but present in all other families; the implications of this are discussed. Polymorphic proteins at the population or species level were not detected; this conspicuous phylogenetic conservatism is discussed with regard to its possible evolutionary significance. Following a summary of the protein data; three categories of, defined probability statements, based on the biochemical and other evidence, allow speculative comment on the evolutionary relationships and history of the taxa within the Procellariiformes. The value of further biochemical research into the marine birds is emphasised.</p>

scholarly journals Prolegomena to the Problem of Determination and Classification of Original Religious Beliefs

2007 ◽  
pp. 18-26
Author(s):  
Dmytro V. Bazyk
Keyword(s):  
Religious Beliefs ◽  
Scientific Research ◽  
Religious Studies ◽  
The Other ◽  
Aboriginal Peoples ◽  
Present Stage ◽  
History Of ◽  
Methodological Approaches ◽  
Theoretical Developments

At the present stage of scientific research, one of the undefined problems in religious studies is, first of all, the problem of the expediency and relevance of the use of the term "primitive religions" or "primitive religious beliefs" in relation to both representatives of Aboriginal peoples of the present and the analysis of the development of religions in the history of forms of religion. discovered in general. The problem of determining the original religion and its forms of expression is somewhat compounded by the fact that the use of special terminology in theoretical developments depends not only on the various features of research methodological approaches, but also on the language in which studies are commonly published. Therefore, the use of one or the other terminology requires the isolation of a possible synonym for relatively adequate nomination (naming) of these religious manifestations.

scholarly journals The system of points of view in Vasily Shukshin's short stories

2021 ◽  
Vol 27 (3) ◽  
pp. 148-154
Author(s):  
Natalia A. Guz ◽  
Yulia G. Babicheva
Keyword(s):  
Short Stories ◽  
Scientific Understanding ◽  
Point Of View ◽  
The Other ◽  
Frequent Change ◽  
History Of ◽  
Points Of View ◽  
First Time

The purpose of the work is to explore the point of view in Vasily Shukshin's short stories in its systematic and diverse manifestation. Topicality is provided by the exceptional significance of this category in narratology. The study of the point of view based on the material of short stories by Vasily Shukshin has been conducted for the first time. The article briefly traces the history of scientific understanding of the category of point of view in foreign and Russian philology and notes the variety of approaches and definitions in the formulation of the concept. The authors use the classification of Boris Uspenskij for analysis and consider the point of view in Vasily Shukshin's short stories in psychological, ideological (evaluative), spatial-temporal and phraseological terms. The positions of Boris Korman, Yuri Lotman, Wolf Schmid and Franz Karl Stanzel also take into account. The authors note the features of Vasily Shukshin's narration that affect the expression of the point of view in the text. Vasily Shukshin's short stories are characterised by a dynamic and frequent change of points of view, which indicates the technique of “montageˮ and similarities in this regard with cinematic techniques. The conclusions generalise the variety of ways and forms of expression of the point of view in the studied artistic material. The point of view in the considered stories is characterised by variability in the correlation of subjects of speech and subjects of consciousness, alternation of external and internal points of view, mutual transitions from one to the other, text interference and other hybrid phenomena.

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