scholarly journals Field Evaluation Of Conde Progenies With Early Heading Date And Resistance To Bacterial Leaf Blight

2020 ◽  
Vol 23 (2) ◽  
pp. 87
Author(s):  
Fatimah Fatimah ◽  
Joko Prasetiyono ◽  
Ahmad Dadang ◽  
Tasliah Tasliah ◽  
Masumah Masumah
Keyword(s):  
Agronomic Traits ◽  
Rice Variety ◽  
Heading Date ◽  
Field Evaluation ◽  
Leaf Blight ◽  
Bacterial Leaf Blight ◽  
Early Maturity ◽  
South Sulawesi ◽  
Donor Parent ◽  
Marker Assisted Backcrossing

Heading date is one of key traits in rice adaptation to different environments. Rice with early maturity is very useful for increasing rice production extensively especially in Indonesia. The improvement of rice variety Conde for heading date and resistance to bacterial leaf blight (BLB) was developed through Marker Assisted Backcrossing approach (MAB). Xa7 derived from Conde as recipient parents for resistance to BLB and Hd2 gene derived from Nipponbare as a donor parent for heading date. The aim of this research was to evaluate the performance of heading date and agronomic traits of 85 BC2F4 lines in two field stations, Sukamandi (West Java) and Maros (South Sulawesi). Molecular analysis of Xa7 on chromosome 6 and Hd2 gene on chromosome 7 and agronomic performance was evaluated. Foreground analysis resulted 41% for Xa7 and 66.7% for Hd2 gene in homozygous condition. The majority of lines have similar heading date and yield with Conde and more resistance to bacterial leaf blight (BLB) than Conde. Six lines flowered earlier 5 days than Conde in Sukamandi and three lines flowered earlier 3 days in Maros. Twelve lines with flowered earlier than Conde, resistance to BLB and similar yield with Conde were selected for background analysis resulted 93% genome recovery. These lines would be further evaluated in preliminary yield trail for their stability.

scholarly journals IMPROVEMENT OF EARLY MATURITY IN RICE VARIETY BY MARKER ASSISTED BACKCROSS BREEDING OF Hd2 GENE

2014 ◽  
Vol 15 (2) ◽  
pp. 55
Author(s):  
Fatimah Fatimah ◽  
Joko Prasetiyono ◽  
Ahmad Dadang ◽  
Tasliah Tasliah
Keyword(s):  
Agronomic Traits ◽  
Rice Variety ◽  
Heading Date ◽  
Rice Production ◽  
Early Maturity ◽  
Breeding Lines ◽  
Early Maturing ◽  
Two Generations ◽  
Donor Parent ◽  
Marker Assisted Backcross Breeding

Early-maturing and high-yielding rice variety is very useful for increasing rice production in Indonesia. The aim of this research was to develop new lines of Indonesian rice containing Hd2 gene using Code variety as a recipient parent and Nipponbare variety as a donor parent through targetted MAB approach using RM1362 and RM7601 in chromosom 7 for foreground selection. After two generations of backcrossing, the positive alleles of Hd2 gene from Nipponbare had successfully trans-ferred into Code. The plant number CdNp_29 in BC2F2 popula-tion had the highest genome recovery of 82.7%. The twelve BC2F3 plants were selected for self-pollination to generate BC2F4. These selected lines that carried the Hd2 gene were screened in the greenhouse for the evaluation of heading date and agronomic traits. All improved lines had Hd2 gene similar to the donor parent Nipponbare. The heading date of the breeding lines ranged from 73 to 89 days (Code 85 days) or fill the third criterion of rice maturity that is 103-104 days compared to Code of 116-119 days, whereas their agronomic performances were similar with that of Code. Application of MABc for im-proving rice early maturity has accelerated the development and selection in early generation of superior lines having genetic background of Code. It is expected that the newly developed lines of Code will be utilized to increase rice production in Indonesia.

scholarly journals IMPROVEMENT OF EARLY MATURITY IN RICE VARIETY BY MARKER ASSISTED BACKCROSS BREEDING OF Hd2 GENE

2014 ◽  
Vol 15 (2) ◽  
pp. 55
Author(s):  
Fatimah Fatimah ◽  
Joko Prasetiyono ◽  
Ahmad Dadang ◽  
Tasliah Tasliah
Keyword(s):  
Agronomic Traits ◽  
Rice Variety ◽  
Heading Date ◽  
Rice Production ◽  
Early Maturity ◽  
Breeding Lines ◽  
Early Maturing ◽  
Two Generations ◽  
Donor Parent ◽  
Marker Assisted Backcross Breeding

Early-maturing and high-yielding rice variety is very useful for increasing rice production in Indonesia. The aim of this research was to develop new lines of Indonesian rice containing Hd2 gene using Code variety as a recipient parent and Nipponbare variety as a donor parent through targetted MAB approach using RM1362 and RM7601 in chromosom 7 for foreground selection. After two generations of backcrossing, the positive alleles of Hd2 gene from Nipponbare had successfully trans-ferred into Code. The plant number CdNp_29 in BC2F2 popula-tion had the highest genome recovery of 82.7%. The twelve BC2F3 plants were selected for self-pollination to generate BC2F4. These selected lines that carried the Hd2 gene were screened in the greenhouse for the evaluation of heading date and agronomic traits. All improved lines had Hd2 gene similar to the donor parent Nipponbare. The heading date of the breeding lines ranged from 73 to 89 days (Code 85 days) or fill the third criterion of rice maturity that is 103-104 days compared to Code of 116-119 days, whereas their agronomic performances were similar with that of Code. Application of MABc for im-proving rice early maturity has accelerated the development and selection in early generation of superior lines having genetic background of Code. It is expected that the newly developed lines of Code will be utilized to increase rice production in Indonesia.

scholarly journals PEMANFAATAN PIRAMIDA GEN KETAHANAN TERHADAP PENYAKIT HAWAR DAUN BAKTERI DALAM MENDUKUNG PERAKITAN VARIETAS UNGGUL PADI Application of Gene Pyramiding For Resistance to Bacterial Leaf Blight to Develop New Rice Variety

2020 ◽  
Vol 39 (1) ◽  
pp. 11
Author(s):  
Fatimah Fatimah ◽  
Joko Prasetiyono
Keyword(s):  
Molecular Marker ◽  
Rice Variety ◽  
Gene Pyramiding ◽  
Leaf Blight ◽  
Rice Production ◽  
Xanthomonas Oryzae ◽  
Bacterial Leaf Blight ◽  
Yield Potential ◽  
Rice Varieties ◽  
Marker Assisted Backcrossing

<p>Bacterial leaf blight (BLB) caused by Xanthomonas oryzae pv oryzae (Xoo) is an important bacterial disease and very destructive to rice plant. BLB decreased rice production from 20%-30% up to 80%. Host-plant resistance is a cost-effective and environmentally safe approach to reduce yield loss. However the development of new rice variety by conventional selection would take several years. The genetic improvement in rice production considered as a vital program in order to ensure national food security. The availability of corresponding molecular marker makes it more precision and efficient by reducing the time required for selection. This present article highlights the molecular approach in breeding for BLB disease resistant rice varieties. In detail, it will be discussed the application of molecular marker assisted backcrossing and pyramiding gene resistance offered breeders to accelerate the rice breeding program for resistance to BLB. The pyramiding of three resistance BLB genes (xa5, Xa7, and Xa21and one gene (Xa4) as a background into two elite indica rice varieties, Ciherang and Inpari 13, was introduced successfully. The combining of conventional breeding, marker assisted backcrossing, disease evaluation, agronomic performance and yield has led the significant resistance of pyramid lines to Xoo Race III, IV and VIII in vegetative and generative phase while their yield potential was maintained (6-7 ton/ha). The current status of Ciherang-HDB and Inpari 13-HDB pyramid lines is the production of nucleoseeds and breeder seeds. This broad spectrum and durable resistance characteristic may help in controlling BLB disease in different region of Indonesia and it will facilitate the rice self-sustainability program.</p><p>Keywords: Rice, gene pyramiding, plant breeding, molecular marker.</p><p> </p><p><strong>Abstrak</strong></p><p>Penyakit hawar daun bakteri (HDB) yang disebabkan oleh Xanthomonas oryzae pv oryzae (Xoo) merupakan penyakit penting pada tanaman padi karena dapat menurunkan produksi padi rata-rata 20-30% bahkan dapat mencapai 80%. Penggunaan varietas tahan merupakan cara pengendalian yang paling efektif, ramah lingkungan, dan mudah dilakukan. Namun pengembangan varietas unggul baru melalui seleksi konvensional memerlukan waktu lebih lama. Perbaikan varietas padi perlu terus dikembangkan dalam mendukung ketahanan pangan dan kemandirian pangan nasional. Tersedianya marka molekuler membantu proses pemuliaan tanaman menjadi lebih presisi dan lebih efisien sehingga mengurangi waktu seleksi pada tanaman progeni. Tulisan ini memfokuskan pendekatan molekuler dalam pemuliaan varietas tahan penyakit HDB melalui piramida gen ketahanan untuk mempercepat progam pemuliaan padi tahan penyakit HDB. Kegiatan menggabungkan tiga gen ketahanan (xa5, Xa7, dan Xa21) dan satu gen (Xa4) sebagai background ke dalam padi varietas Ciherang dan Inpari-13 telah berhasil dilakukan. Melalui penggabungan beberapa pendekatan yaitu pemuliaan konvensional dan silang balik berbantu marka, evaluasi penyakit dan keragaan agronomi serta komponen hasil telah menunjukkan peningkatan ketahanan yang nyata pada galur-galur piramida Ciherang HDB dan Inpari-13 HDB pada tiga ras Xoo (Ras III, IV, dan VIII), baik pada fase vegetatif maupun generatif dengan potensi hasil tidak berbeda nyata dengan tetuanya (6-7 t/ha). Saat ini sudah diproduksi benih inti (NS) dan benih penjenis (BS) galur-galur piramida Ciherang HDB dan Inpari-13 HDB. Dengan demikian, galur-galur piramida memiliki spektrum yang luas dan mampu bertahan dalam jangka waktu lama sehingga dapat mengontrol penyakit HDB di berbagai wilayah Indonesia dan mendukung target pemerintah untuk mempertahankan swasembada beras secara berkelanjutan.</p><p>Kata kunci: Padi, piramida gen, pemuliaan tanaman, marka molekuler.<br /><br /></p><p> </p>

scholarly journals Improved bacterial leaf blight disease resistance in the major elite Vietnamese rice cultivar TBR225 via editing of the OsSWEET14 promoter

PLoS ONE ◽  
2021 ◽  
Vol 16 (9) ◽  
pp. e0255470
Author(s):  
Phuong Nguyen Duy ◽  
Dai Tran Lan ◽  
Hang Pham Thu ◽  
Huong Phung Thi Thu ◽  
Ha Nguyen Thanh ◽  
...  
Keyword(s):  
Agronomic Traits ◽  
Rice Variety ◽  
Rice Cultivar ◽  
Leaf Blight ◽  
Bacterial Leaf Blight ◽  
Transcription Activator ◽  
Rice Varieties ◽  
Sugar Transporters ◽  
Blight Disease ◽  
Mutant Lines

TBR225 is one of the most popular commercial rice varieties in Northern Vietnam. However, this variety is highly susceptible to bacterial leaf blight (BLB), a disease caused by Xanthomonas oryzae pv. oryzae (Xoo) which can lead to important yield losses. OsSWEET14 belongs to the SWEET gene family that encodes sugar transporters. Together with other Clade III members, it behaves as a susceptibility (S) gene whose induction by Asian Xoo Transcription-Activator-Like Effectors (TALEs) is absolutely necessary for disease. In this study, we sought to introduce BLB resistance in the TBR225 elite variety. First, two Vietnamese Xoo strains were shown to up-regulate OsSWEET14 upon TBR225 infection. To investigate if this induction is connected with disease susceptibility, nine TBR225 mutant lines with mutations in the AvrXa7, PthXo3 or TalF TALEs DNA target sequences of the OsSWEET14 promoter were obtained using the CRISPR/Cas9 editing system. Genotyping analysis of T0 and T1 individuals showed that mutations were stably inherited. None of the examined agronomic traits of three transgene-free T2 edited lines were significantly different from those of wild-type TBR225. Importantly, one of these T2 lines, harboring the largest homozygous 6-bp deletion, displayed decreased OsSWEET14 expression as well as a significantly reduced susceptibility to a Vietnamese Xoo strains and complete resistance to another one. Our findings indicate that CRISPR/Cas9 editing conferred an improved BLB resistance to a Vietnamese commercial elite rice variety.

scholarly journals FIELD EVALUATION OF RICE LINES FROM IRRI AGAINST BACTERIAL LEAF BLIGHT IN THUA THIEN HUE – VIETNAM

2017 ◽  
Vol 126 (3E) ◽  
Author(s):  
Trương Thị Hồng Hải ◽  
Trần Viết Thắng ◽  
Phan Thị Phương Nhi ◽  
Trần Đăng Hòa
Keyword(s):  
Bacterial Blight ◽  
Agronomic Traits ◽  
Field Evaluation ◽  
Leaf Blight ◽  
Bacterial Leaf Blight ◽  
Rice Bacterial Blight ◽  
Promising Strategy ◽  
Randomized Design ◽  
Rice Disease ◽  
Completely Randomized Design

Abstract: Xanthomanas campestris pv. oryzae is the causal agent of rice bacterial blight, a destructive rice disease worldwide, is increasing recently in Vietnam. Many people attempted to control this disease by chemical sprays. However, there are claims and counterclaims about the performance of many chemicals because they are hazardous to human health and environment. The most accepted and promising strategy is breeding resistant cultivars. In this study, 66 rice lines provided by IRRI were evaluated the resistance to bacterial leaf blight in Thua Thien Hue of Vietnam. The experiment was laid out in a completely randomized design (CRD) without replication in Spring-Summer 2015 in the open field at Quang Dien, Thua Thien Hue. The results showed that rice lines were high resistance against bacterial leaf blight. The IR 12 line performed the highest susceptant level to bacterial leaf blight. Based on agronomic traits and level of bacterial leaf blight resistance, IR 3, IR 4, IR 46, IR 28, IR 6, IR 18, IR 14 và IR 26 lines were selected for breeding program

scholarly journals Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach

2024 ◽  
Vol 84 ◽  
Author(s):  
S. N. Yazid ◽  
K. Ahmad ◽  
M. S. F. A. Razak ◽  
Z. A. Rahman ◽  
K. Ramachandran ◽  
...  
Keyword(s):  
Yield Loss ◽  
Leaf Blight ◽  
Bacterial Leaf Blight ◽  
Recurrent Parent ◽  
Success Story ◽  
Rice Varieties ◽  
Donor Parent ◽  
Supporting Tool ◽  
And Control ◽  
Marker Assisted Backcrossing

Abstract Bacterial leaf blight (BLB) is one of the major rice diseases in Malaysia. This disease causes substantial yield loss as high as 70%. Development of rice varieties which inherited BLB resistant traits is a crucial approach to promote and sustain rice industry in Malaysia. Hence, this study aims were to enhance BLB disease resistant characters of high yielding commercial variety MR219 through backcross breeding approach with supporting tool of marker-assisted selection (MAS). Broad spectrum BLB resistance gene, Xa7 from donor parent IRBB7 were introgressed into the susceptible MR219 (recurrent parent) using two flanking markers ID7 and ID15. At BC3F4, we managed to generate 19 introgressed lines with homozygous Xa7 gene and showed resistant characteristics as donor parent when it was challenged with Xanthomonas oryzae pv. oryzae through artificial inoculation. Recurrent parent MR219 and control variety, MR263 were found to be severely infected by the disease. The improved lines exhibited similar morphological and yield performance characters as to the elite variety, MR219. Two lines, PB-2-107 and PB-2-34 were chosen to be potential lines because of their outstanding performances compared to parent, MR219. This study demonstrates a success story of MAS application in development of improved disease resistance lines of rice against BLB disease.

scholarly journals Development of New Rice (Oryza. sativa L.) Breeding Lines through Marker-Assisted Introgression and Pyramiding of Brown Planthopper, Blast, Bacterial Leaf Blight Resistance, and Aroma Genes

Agronomy ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 2525
Author(s):  
Xuan Wang ◽  
Xinying Guo ◽  
Xixi Ma ◽  
Liang Luo ◽  
Yaoyu Fang ◽  
...  
Keyword(s):  
High Resistance ◽  
Agronomic Traits ◽  
Oryza Sativa L ◽  
Brown Planthopper ◽  
Leaf Blight ◽  
Bacterial Leaf Blight ◽  
Breeding Method ◽  
Breeding Lines ◽  
Biotic Stresses ◽  
Multiple Genes

Brown planthopper, blast, and bacterial blight are the main biotic stressors of rice and can cause a massive loss in rice production. Aroma is an important character of rice quality. It is of far-reaching significance to breed resistant and high-quality varieties using germplasms with objective genes. In this study, the introgression and pyramiding of brown planthopper (BPH), blast, and bacterial leaf blight (BLB) resistance genes and aroma genes into elite rice maintainers and restorers were conducted through conventional cross-breeding coupled with the marker-assisted selection (MAS) breeding method. Single-plant selection was performed from F2 onwards to select desirable recombinants possessing alleles of interest with suitable phenotypes. Respective linked markers were used in each generation from intercrossing to the F7 generation for tracking the presence of targeted genes. A total of 74 improved lines (ILs) have been developed which possess a combination of 1 to 4 genes for BPH, blast, and BLB resistance and aroma. These ILs showed moderate to high resistance to multiple biotic stresses (BPH, blast and BLB) or aromatic fragrance without obvious negative effects on agronomic traits. As multiple resistance and aromatic traits have become significant objectives in rice breeding, these resistance and/or aroma gene introgressed or pyramided lines have important application prospects. Core ideas: (1) marker-assisted breeding was used to pyramid multiple genes for an elite breeding line; (2) improved lines with the introgression of 1–4 genes were developed to achieve high resistance against various biotic stresses and aroma; (3) new lines were used as donor parents to introgress multiple genes in other genetic backgrounds.

scholarly journals Response of a local rice variety Pandanwangi to infection of bacterial leaf blight Xanthomonas oryzae pv. oryzae strain III, IV, and VIII

2021 ◽  
Vol 905 (1) ◽  
pp. 012068
Author(s):  
Hadiwiyono ◽  
S H Poromarto ◽  
S Widono ◽  
R F Rizal
Keyword(s):  
Rice Variety ◽  
Leaf Blight ◽  
Rice Production ◽  
Xanthomonas Oryzae ◽  
Bacterial Leaf Blight ◽  
Artificial Inoculation ◽  
Limiting Factors ◽  
Bacterial Suspension ◽  
West Java ◽  
Local Cultivar

Abstract Bacterial leaf blight (BLB) caused by Xanthomonas oryzae pv. oryzae (Xoo) is one of the limiting factors in rice production. A local cultivar, rice “Pandanwangi” is a superior variety much preferred and cultivated by the farmers in Cianjur, West Java, Indonesia. The information about the response of “Pandangwangi” to Xoo is still poorly understood. This paper reports the results of the evaluation of “Pandanwangi” response against BLB. This research was conducted in a greenhouse with artificial inoculation using Xoo strains III, IV, and VIII with bacterial suspension at 108 cfu.mL−1. The results showed that the response of cv Pandanwangi to Xoo infection was different from the strain of Xoo. “Pandanwangi” cultivar was susceptible to Xoo strain III and VIII and very susceptible to strain IV.

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