scholarly journals Initial Description of the Genome of Aeluropus Littoralis, a Halophile Grass

2020 ◽  
Author(s):  
Seyyed Hamidreza Hashemi ◽  
Mojhdeh Arab ◽  
Behnaz Dolatabadi ◽  
Yi-Tzu Kuo ◽  
Mariana Alejandra Baez ◽  
...  
Keyword(s):  
Stress Responses ◽  
Stress Resistance ◽  
Molecular Mechanisms ◽  
Expressed Sequence Tag ◽  
Salt Water ◽  
Crop Plants ◽  
Wild Plant ◽  
Salt Glands ◽  
Aeluropus Littoralis ◽  
Stress Related Genes

Abstract Background: The use of wild plant species or their halophytic relatives has been considered in plant breeding programs to improve salt and drought tolerance in crop plants. Aeluropus littoralis serves as halophyte model for identification and isolation of novel stress adaptation genes. This species is described as perennial monocot grass. A. littoralis grows in damp or arid areas, often salt-impregnated places and waste land in cultivated areas. A. littoralis can survive where the water salinity is periodically high and tolerate high salt concentrations in the soil up to 1100 mM sodium chloride. Therefore, it serves as valuable genetic resource to understand molecular mechanisms of stress-responses in monocots. The knowledge can potentially be used for improving tolerance to abiotic stresses in economically important crops. Several morphological, anatomical, ecological, and physiological traits of A. littoralis have been investigated so far and also the transfer of stress related genes to other species resulted in enhanced stress resistance. After watering with salt water the grass is able to excrete salt via its salt glands. Meanwhile, a number of ESTs (expressed sequence tag), genes and promoters induced by the salt and drought stresses were isolated, sequenced and annotated at a molecular level. Results: Here we describe the genome sequence and structure of A. littoralis analyzed by whole genome sequencing and histological analysis. The chromosome number was determined to be 20 (2n = 2X = 20), absence of B chromsomes shown, and the genome size calculated to be 354 Megabasepairs.Conclusions: This genomic information provided here, will support the functional investigation and application of novel genes improving salt stress resistance in crop plants.

scholarly journals Initial description of the Genome of Aeluropus littoralis, a halophile grass

2020 ◽  
Author(s):  
Seyyed Hamidreza Hashemi ◽  
Mojhdeh Arab ◽  
Behnaz Dolatabadi ◽  
Yi-Tzu Kuo ◽  
Mariana Alejandra Baez ◽  
...  
Keyword(s):  
Stress Responses ◽  
Stress Resistance ◽  
Molecular Mechanisms ◽  
Expressed Sequence Tag ◽  
Salt Water ◽  
Crop Plants ◽  
Wild Plant ◽  
Salt Glands ◽  
Aeluropus Littoralis ◽  
Stress Related Genes

Abstract Background: The use of wild plant species or their halophytic relatives has been considered in plant breeding programs to improve salt and drought tolerance in crop plants. Aeluropus littoralis serves as halophyte model for identification and isolation of novel stress adaptation genes. This species is described as perennial monocot grass. A. littoralis grows in damp or arid areas, often salt-impregnated places and waste land in cultivated areas. A. littoralis can survive where the water salinity is periodically high and tolerate high salt concentrations in the soil up to 1100 mM sodium chloride. Therefore, it serves as valuable genetic resource to understand molecular mechanisms of stress-responses in monocots. The knowledge can potentially be used for improving tolerance to abiotic stresses in economically important crops. Several morphological, anatomical, ecological, and physiological traits of A. littoralis have been investigated so far and also the transfer of stress related genes to other species resulted in enhanced stress resistance. After watering with salt water the grass is able to excrete salt via its salt glands. Meanwhile, a number of ESTs (expressed sequence tag), genes and promoters induced by the salt and drought stresses were isolated, sequenced and annotated at a molecular level.Results: Here we describe the genome sequence and structure of A. littoralis analyzed by whole genome sequencing and histological analysis. The chromosome number was determined to be 20 (2n = 2X = 20), absence of B chromsomes shown, and the genome size calculated to be 354 Megabasepairs.Conclusions: This genomic information provided here, will support the functional investigation and application of novel genes improving salt stress resistance in crop plants.

scholarly journals A Simple and Low-Cost Strategy to Improve Conidial Yield and Stress Resistance of Trichoderma guizhouense through Optimizing Illumination Conditions

2022 ◽  
Vol 8 (1) ◽  
pp. 50
Author(s):  
Yifan Li ◽  
Xiya Meng ◽  
Degang Guo ◽  
Jia Gao ◽  
Qiwei Huang ◽  
...  
Keyword(s):  
Blue Light ◽  
Stress Responses ◽  
Stress Resistance ◽  
Low Cost ◽  
Hog Pathway ◽  
Precise Control ◽  
Blue Light Receptor ◽  
Expression Of Genes ◽  
Low Cost Strategy ◽  
Stress Related Genes

Light is perceived by photoreceptors in fungi and further integrated into the stress-activated MAPK HOG pathway, and thereby potentially activates the expression of genes for stress responses. This indicates that the precise control of light conditions can likely improve the conidial yield and stress resistance to guarantee the low cost and long shelf life of Trichoderma-based biocontrol agents and biofertilizers. In this study, effects of wavelengths and intensities of light on conidial yield and stress tolerance to osmotic, oxidative and pH stresses in Trichoderma guizhouense were investigated. We found that 2 μmol photons/(m2 × s) of blue light increased the conidial yield more than 1000 folds as compared to dark condition and simultaneously enhanced conidial stress resistance. The enhanced conidial stress resistance is probably due to the upregulated stress-related genes in blue light, which is under the control of the blue light receptor BLR1 and the MAP kinase HOG1.

scholarly journals Leaf senescence: progression, regulation, and application

2021 ◽  
Vol 1 (1) ◽  
Author(s):  
Yongfeng Guo ◽  
Guodong Ren ◽  
Kewei Zhang ◽  
Zhonghai Li ◽  
Ying Miao ◽  
...  
Keyword(s):  
Leaf Senescence ◽  
Stress Responses ◽  
Translational Regulation ◽  
Molecular Mechanisms ◽  
Leaf Age ◽  
Genetic Research ◽  
Crop Plants ◽  
Stay Green ◽  
Regulatory Pathways ◽  
Nutrient Remobilization

AbstractLeaf senescence, the last stage of leaf development, is a type of postmitotic senescence and is characterized by the functional transition from nutrient assimilation to nutrient remobilization which is essential for plants’ fitness. The initiation and progression of leaf senescence are regulated by a variety of internal and external factors such as age, phytohormones, and environmental stresses. Significant breakthroughs in dissecting the molecular mechanisms underpinning leaf senescence have benefited from the identification of senescence-altered mutants through forward genetic screening and functional assessment of hundreds of senescence-associated genes (SAGs) via reverse genetic research in model plant Arabidopsis thaliana as well as in crop plants. Leaf senescence involves highly complex genetic programs that are tightly tuned by multiple layers of regulation, including chromatin and transcription regulation, post-transcriptional, translational and post-translational regulation. Due to the significant impact of leaf senescence on photosynthesis, nutrient remobilization, stress responses, and productivity, much effort has been made in devising strategies based on known senescence regulatory mechanisms to manipulate the initiation and progression of leaf senescence, aiming for higher yield, better quality, or improved horticultural performance in crop plants. This review aims to provide an overview of leaf senescence and discuss recent advances in multi-dimensional regulation of leaf senescence from genetic and molecular network perspectives. We also put forward the key issues that need to be addressed, including the nature of leaf age, functional stay-green trait, coordination between different regulatory pathways, source-sink relationship and nutrient remobilization, as well as translational researches on leaf senescence.

scholarly journals Beyond Arabidopsis: BBX Regulators in Crop Plants

2021 ◽  
Vol 22 (6) ◽  
pp. 2906
Author(s):  
Urszula Talar ◽  
Agnieszka Kiełbowicz-Matuk
Keyword(s):  
Stress Tolerance ◽  
Crop Plants ◽  
Abiotic Stress Response ◽  
Biotic And Abiotic Stress ◽  
Photoperiodic Regulation ◽  
Large Families ◽  
Stress Related Genes ◽  
Unique Domain ◽  
Clock Mechanism

B-box proteins represent diverse zinc finger transcription factors and regulators forming large families in various plants. A unique domain structure defines them—besides the highly conserved B-box domains, some B-box (BBX) proteins also possess CCT domain and VP motif. Based on the presence of these specific domains, they are mostly classified into five structural groups. The particular members widely differ in structure and fulfill distinct functions in regulating plant growth and development, including seedling photomorphogenesis, the anthocyanins biosynthesis, photoperiodic regulation of flowering, and hormonal pathways. Several BBX proteins are additionally involved in biotic and abiotic stress response. Overexpression of some BBX genes stimulates various stress-related genes and enhanced tolerance to different stresses. Moreover, there is evidence of interplay between B-box and the circadian clock mechanism. This review highlights the role of BBX proteins as a part of a broad regulatory network in crop plants, considering their participation in development, physiology, defense, and environmental constraints. A description is also provided of how various BBX regulators involved in stress tolerance were applied in genetic engineering to obtain stress tolerance in transgenic crops.

scholarly journals LONP1 and ClpP cooperatively regulate mitochondrial proteostasis for cancer cell survival

Oncogenesis ◽  
2021 ◽  
Vol 10 (2) ◽  
Author(s):  
Yu Geon Lee ◽  
Hui Won Kim ◽  
Yeji Nam ◽  
Kyeong Jin Shin ◽  
Yu Jin Lee ◽  
...  
Keyword(s):  
Cell Death ◽  
Cell Growth ◽  
Cell Survival ◽  
Cancer Cell ◽  
Stress Responses ◽  
Molecular Mechanisms ◽  
Tca Cycle ◽  
Mitochondrial Matrix ◽  
Mitochondrial Functions ◽  
Cancer Cell Survival

AbstractMitochondrial proteases are key components in mitochondrial stress responses that maintain proteostasis and mitochondrial integrity in harsh environmental conditions, which leads to the acquisition of aggressive phenotypes, including chemoresistance and metastasis. However, the molecular mechanisms and exact role of mitochondrial proteases in cancer remain largely unexplored. Here, we identified functional crosstalk between LONP1 and ClpP, which are two mitochondrial matrix proteases that cooperate to attenuate proteotoxic stress and protect mitochondrial functions for cancer cell survival. LONP1 and ClpP genes closely localized on chromosome 19 and were co-expressed at high levels in most human cancers. Depletion of both genes synergistically attenuated cancer cell growth and induced cell death due to impaired mitochondrial functions and increased oxidative stress. Using mitochondrial matrix proteomic analysis with an engineered peroxidase (APEX)-mediated proximity biotinylation method, we identified the specific target substrates of these proteases, which were crucial components of mitochondrial functions, including oxidative phosphorylation, the TCA cycle, and amino acid and lipid metabolism. Furthermore, we found that LONP1 and ClpP shared many substrates, including serine hydroxymethyltransferase 2 (SHMT2). Inhibition of both LONP1 and ClpP additively increased the amount of unfolded SHMT2 protein and enhanced sensitivity to SHMT2 inhibitor, resulting in significantly reduced cell growth and increased cell death under metabolic stress. Additionally, prostate cancer patients with higher LONP1 and ClpP expression exhibited poorer survival. These results suggest that interventions targeting the mitochondrial proteostasis network via LONP1 and ClpP could be potential therapeutic strategies for cancer.

Expression of an A20/AN1 Stress-Associated Protein from Aeluropus littoralis in Rice Deregulates Stress-Related Genes

2021 ◽  
Author(s):  
Walid Ben Romdhane ◽  
Rania Ben Saad ◽  
Donaldo Meynard ◽  
Nabil Zouari ◽  
Mohamed Tarroum ◽  
...  
Keyword(s):  
Aeluropus Littoralis ◽  
Stress Associated Protein ◽  
Stress Related Genes

Transcriptional targets of DAF-16 insulin signaling pathway protect C. elegans from extreme hypertonic stress

2005 ◽  
Vol 288 (2) ◽  
pp. C467-C474 ◽  
Author(s):  
S. Todd Lamitina ◽  
Kevin Strange
Keyword(s):  
Insulin Signaling ◽  
Stress Resistance ◽  
Molecular Mechanisms ◽  
Organic Osmolytes ◽  
Dependent Manner ◽  
Animal Cells ◽  
Hypertonic Stress ◽  
C Elegans ◽  
Downstream Target ◽  
Molecular Damage

All cells adapt to hypertonic stress by regulating their volume after shrinkage, by accumulating organic osmolytes, and by activating mechanisms that protect against and repair hypertonicity-induced damage. In mammals and nematodes, inhibition of signaling from the DAF-2/IGF-1 insulin receptor activates the DAF-16/FOXO transcription factor, resulting in increased life span and resistance to some types of stress. We tested the hypothesis that inhibition of insulin signaling in Caenorhabditis elegans also increases hypertonic stress resistance. Genetic inhibition of DAF-2 or its downstream target, the AGE-1 phosphatidylinositol 3-kinase, confers striking resistance to a normally lethal hypertonic shock in a DAF-16-dependent manner. However, insulin signaling is not inhibited by or required for adaptation to hypertonic conditions. Microarray studies have identified 263 genes that are transcriptionally upregulated by DAF-16 activation. We identified 14 DAF-16-upregulated genes by RNA interference screening that are required for age- 1 hypertonic stress resistance. These genes encode heat shock proteins, proteins of unknown function, and trehalose synthesis enzymes. Trehalose levels were elevated approximately twofold in age- 1 mutants, but this increase was insufficient to prevent rapid hypertonic shrinkage. However, age- 1 animals unable to synthesize trehalose survive poorly under hypertonic conditions. We conclude that increased expression of proteins that protect eukaryotic cells against environmental stress and/or repair stress-induced molecular damage confers hypertonic stress resistance in C. elegans daf- 2/ age- 1 mutants. Elevated levels of solutes such as trehalose may also function in a cytoprotective manner. Our studies provide novel insights into stress resistance in animal cells and a foundation for new studies aimed at defining molecular mechanisms underlying these essential processes.

Insights into the molecular basis of host behaviour manipulation by Toxoplasma gondii infection

2017 ◽  
Vol 1 (6) ◽  
pp. 563-572 ◽  
Author(s):  
Pierre-Mehdi Hammoudi ◽  
Dominique Soldati-Favre
Keyword(s):  
Toxoplasma Gondii ◽  
Stress Responses ◽  
Molecular Mechanisms ◽  
Brain Regions ◽  
Intermediate Hosts ◽  
Toxoplasma Gondii Infection ◽  
Host Parasite ◽  
Host Behaviour ◽  
The Brain ◽  
Brain Homeostasis

Typically illustrating the ‘manipulation hypothesis’, Toxoplasma gondii is widely known to trigger sustainable behavioural changes during chronic infection of intermediate hosts to enhance transmission to its feline definitive hosts, ensuring survival and dissemination. During the chronic stage of infection in rodents, a variety of neurological dysfunctions have been unravelled and correlated with the loss of cat fear, among other phenotypic impacts. However, the underlying neurological alteration(s) driving these behavioural modifications is only partially understood, which makes it difficult to draw more than a correlation between T. gondii infection and changes in brain homeostasis. Moreover, it is barely known which among the brain regions governing fear and stress responses are preferentially affected during T. gondii infection. Studies aiming at an in-depth dissection of underlying molecular mechanisms occurring at the host and parasite levels will be discussed in this review. Addressing this reminiscent topic in the light of recent technical progress and new discoveries regarding fear response, olfaction and neuromodulator mechanisms could contribute to a better understanding of this complex host–parasite interaction.

scholarly journals Activated Expression of PHT Genes Contributes to Osmotic Stress Resistance under Low Phosphorus Levels in Malus

2018 ◽  
Vol 143 (6) ◽  
pp. 436-445
Author(s):  
Tingting Sun ◽  
Tingting Pei ◽  
Zhijun Zhang ◽  
Mingjun Li ◽  
Linlin Huang ◽  
...  
Keyword(s):  
Osmotic Stress ◽  
Stress Resistance ◽  
Molecular Mechanisms ◽  
Photosynthetic Parameters ◽  
Plant Responses ◽  
Malus Prunifolia ◽  
Physiological Indicators ◽  
Malus Sieversii ◽  
Low Phosphorus ◽  
Osmotic Stress Resistance

Osmotic adjustments play a fundamental role in plant responses to water deficit. For apple (Malus domestica) trees growing in the primary production areas of China, drought and low phosphorus (P) levels are the main sources of abiotic stress. Although tolerance to drought and low P are important breeding goals for cultivar improvement, there is little information on natural variation within Malus for these traits or the molecular mechanisms that may mediate tolerance. In this study, it was found that in plants grown under conditions of osmotic and low P stress, electrolyte leakage and photosynthetic parameters were significantly higher, but chlorophyll concentrations were lower compared with nonstressed plants. These physiological indicators revealed that, under low P condition, the order of osmotic stress resistance (high to low) was Malus sieversii (Ms) → Malus prunifolia (Mp) → Malus hupehensis (Mh). Expression of the phosphorus transporter genes PHT1;7, PHT1;12, and PHT2;1 in the roots and PHT1;12 and PHT4;5 in the leaves was positively correlated with plant osmotic resistance. It is proposed that the highly expressed PHT genes might improve P absorption and transport efficiency, resulting in the high osmotic stress resistance under low P level conditions in Malus species.

scholarly journals Advances in the Regulation of Epidermal Cell Development by C2H2 Zinc Finger Proteins in Plants

2021 ◽  
Vol 12 ◽  
Author(s):  
Guoliang Han ◽  
Yuxia Li ◽  
Ziqi Qiao ◽  
Chengfeng Wang ◽  
Yang Zhao ◽  
...  
Keyword(s):  
Cell Fate ◽  
Zinc Finger ◽  
Epidermal Cell ◽  
Stress Responses ◽  
Root Hairs ◽  
Zinc Finger Proteins ◽  
Cell Development ◽  
Salt Glands ◽  
Plant Adaptation ◽  
C2h2 Zinc Finger

Plant epidermal cells, such as trichomes, root hairs, salt glands, and stomata, play pivotal roles in the growth, development, and environmental adaptation of terrestrial plants. Cell fate determination, differentiation, and the formation of epidermal structures represent basic developmental processes in multicellular organisms. Increasing evidence indicates that C2H2 zinc finger proteins play important roles in regulating the development of epidermal structures in plants and plant adaptation to unfavorable environments. Here, we systematically summarize the molecular mechanism underlying the roles of C2H2 zinc finger proteins in controlling epidermal cell formation in plants, with an emphasis on trichomes, root hairs, and salt glands and their roles in plant adaptation to environmental stress. In addition, we discuss the possible roles of homologous C2H2 zinc finger proteins in trichome development in non-halophytes and salt gland development in halophytes based on bioinformatic analysis. This review provides a foundation for further study of epidermal cell development and abiotic stress responses in plants.

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