scholarly journals Chitinolytic and Antagonistic Activity of Streptomyces Isolated from Fadama Soil against Phytopathogenic Fungi

2021 ◽  
Vol 32 (3) ◽  
pp. 25-38
Author(s):  
Aminu Argungu Umar ◽  
Aminu Bandam Hussaini ◽  
Jibril Yahayya ◽  
Ibrahim Sani ◽  
Habiba Aminu

Chitinases which degrade chitin have attracted attention as biological antifungal agents. The purpose of this study is to isolate Streptomyces from Fadama soil and assess its chitinolytic and antagonist potential against phytopathogenic fungi for application as biocontrol agent. Streptomyces were isolated from Fadama soil. The selected isolate CT02 exhibited chitinolytic characteristics. Chitinase production was performed under different temperatures, pH and varying incubation period. The highest chitinase production by CT02 isolate was observed after five days of cultivation. The highest chitinase activity was observed at 35°C and pH 7. The crude extracellular enzyme exhibited a specific activity of 4.20 U/μg whereas partially purified extracellular enzyme exhibited a specific activity of 6.19 U/μg with purification fold of 1.47. The selected isolate CT02 and its extracellular crude chitinase showed in vitro antifungal antagonist potential by inhibiting the growth of Aspergillus niger and Aspergillus oryzae. This indicates that Streptomyces derived chitinases are potential biocontrol agents against phytopathogenic fungi.

Agronomy ◽  
2019 ◽  
Vol 9 (12) ◽  
pp. 891
Author(s):  
Mila Santos ◽  
Fernando Diánez ◽  
Alejandro Moreno-Gavíra ◽  
Brenda Sánchez-Montesinos ◽  
Francisco J. Gea

A study was conducted to explore the efficacy of potential biocontrol agent Cladobotryum mycophilum against different phytopathogenic fungi. The growth rates of 24 isolates of C. mycophilum were determined, and their antagonistic activity was analysed in vitro and in vivo against Botrytis cinerea, Fusarium oxysporum f. sp. radicis-lycopersici, Fusarium oxysporum f.sp. cucumerinum, Fusarium solani, Phytophthora parasitica, Phytophthora capsici, Pythium aphanidermatum and Mycosphaerella melonis. Most isolates grow rapidly, reaching the opposite end of the Petri dish within 72–96 h. Under dual-culture assays, C. mycophilum showed antagonistic activity in vitro against all phytopathogenic fungi tested, with mycelial growth inhibition ranging from 30 to 90% against all the different phytopathogens tested. Similarly, of all the selected isolates, CL60A, CL17A and CL18A significantly (p < 0.05) reduced the disease incidence and severity in the plant assays compared to the controls for the different pathosystems studied. Based on these results, we conclude that C. mycophilum can be considered as a potential biological control agent in agriculture. This is the first study of Cladobotryum mycophilum as a biological control agent for different diseases caused by highly relevant phytopathogens in horticulture.


2005 ◽  
Vol 10 (2) ◽  
pp. 143-151 ◽  
Author(s):  
Priyo Wahyudi ◽  
Untung Suwahyono ◽  
Harsoyo Harsoyo ◽  
Aris Mumpuni ◽  
Dwi Wahyuningsih

Trichoderma harzianum is a well-known mycoparasitic fungus that has been used as biocontrol agent of many phytopathogenic fungi. One of the effort to improve the ability of wild strain of T. harzianum in its antagonistic activity is by exposed them in gamma ray iradiation. In this experiment wild strain of T. harzianum iradiated gamma ray of Cobalt-60 (0.25 kGy, 0.5 kGy, 0.75 kGy, and 1 kGy), then assess the effect of the iradiation on its growth, the antagonistic activity and chitinase activity toward Fusarium oxysporum. Results showed that iradiation of gamma ray 0.25–1 kGy has no effect on the growth of T. harzianum and its antagonistic activity, but it significantly influence the chitinase activity. Probably the fungi have repaired the damage of DNA caused by iradiation, so that the growth and even the enzymatic function has no longer affected.


2020 ◽  
Vol 13 (2) ◽  
pp. 54-65 ◽  
Author(s):  
M.E.A. Bendaha ◽  
H.A. Belaouni

SummaryThis study aims to develop a biocontrol agent against Fusarium oxysporum f.sp. radicis-lycopersici (FORL) in tomato. For this, a set of 23 bacterial endophytic isolates has been screened for their ability to inhibit in vitro the growth of FORL using the dual plate assay. Three isolates with the most sound antagonistic activity to FORL have been qualitatively screened for siderophore production, phosphates solubilization and indolic acetic acid (IAA) synthesis as growth promotion traits. Antagonistic values of the three candidates against FORL were respectively: 51.51 % (EB4B), 51.18 % (EB22K) and 41.40 % (EB2A). Based on 16S rRNA gene sequence analysis, the isolates EB4B and EB22K were closely related to Enterobacter ludwigii EN-119, while the strain EB2A has been assigned to Leclercia adecarboxylata NBRC 102595. The promotion of tomato growth has been assessed in vitro using the strains EB2A, EB4B and EB22K in presence of the phytopathogen FORL. The treatments with the selected isolates increased significantly the root length and dry weight. Best results were observed in isolate EB4B in terms of growth promotion in the absence of FORL, improving 326.60 % of the root length and 142.70 % of plant dry weight if compared with untreated controls. In the presence of FORL, the strain EB4B improved both root length (180.81 %) and plant dry weight (202.15 %). These results encourage further characterization of the observed beneficial effect of Enterobacter sp. EB4B for a possible use as biofertilizer and biocontrol agent against FORL.


2020 ◽  
Vol 30 (1) ◽  
Author(s):  
Zahaed Evangelista-Martínez ◽  
Erika Anahí Contreras-Leal ◽  
Luis Fernando Corona-Pedraza ◽  
Élida Gastélum-Martínez

Abstract Background Fungi are one of the microorganisms that cause most damage to fruits worldwide, affecting their quality and consumption. Chemical controls with pesticides are used to diminish postharvest losses of fruits. However, biological control with microorganisms or natural compounds is an increasing alternative to protect fruits and vegetables. In this study, the antifungal effect of Streptomyces sp. CACIS-1.5CA on phytopathogenic fungi that cause postharvest tropical fruit rot was investigated. Main body Antagonistic activity was evaluated in vitro by the dual confrontation over fungal isolates obtained from grape, mango, tomato, habanero pepper, papaya, sweet orange, and banana. The results showed that antagonistic activity of the isolate CACIS-1.5CA was similar to the commercial strain Streptomyces lydicus WYEC 108 against the pathogenic fungi Colletotrichum sp., Alternaria sp., Aspergillus sp., Botrytis sp., Rhizoctonia sp., and Rhizopus sp. with percentages ranging from 30 to 63%. The bioactive extract obtained from CACIS-1.5 showed a strong inhibition of fungal spore germination, with percentages ranging from 92 to 100%. Morphological effects as irregular membrane border, deformation, shrinkage, and collapsed conidia were observed on the conidia. Molecularly, the biosynthetic clusters of genes for the polyketide synthase (PKS) type I, PKS type II, and NRPS were detected in the genome of Streptomyces sp. CACIS-1.5CA. Conclusions This study presented a novel Streptomyces strain as a natural alternative to the use of synthetic fungicides or other commercial products having antagonistic microorganisms that were used in the postharvest control of phytopathogenic fungi affecting fruits.


2018 ◽  
Vol 3 (01) ◽  
pp. 62-69
Author(s):  
Eka Corneliyawati ◽  
Massora Massora ◽  
Khikmah Khikmah ◽  
As’ad Syamsul Arifin

The rhizosphere is the zone of soil surrounding a plant root where plant roots, soil and the soil biota interact with each other. Chitinolytic fungi has been effectively used in biological control agens. The chitinase activity causes lysis of the fungi cell wall pathogen. The aim of the research was to find optimization of activity chitinase enzyme from rhizosphere soil was conducted in vitro. Optimal growth chitinase production for TKR3 fungi isolate were concentration of chitin 0,2% (b/v), pH 5,5, temperature 30ºC, agitation 150 rpm and incubation time at four days. The optimum yield of chitinase production is influenced by fungal species and environmental conditions.


Nematology ◽  
2001 ◽  
Vol 3 (8) ◽  
pp. 729-734 ◽  
Author(s):  
C.J.(Hans) Kok ◽  
Artemis Papert ◽  
C.B.(Chula) Bok-A-Bin

AbstractEgg masses of Meloidogyne fallax from tomato and potato growing in soil from a nematode suppressive and a nonsuppressive field sustained bacterial population densities two to three orders of magnitude higher than those of the rhizosphere soil. BIOLOG metabolic profiling identified 16 bacterial species from egg masses. Results further indicated 20 species not listed in the BIOLOG database. 122 isolates of bacteria and 19 isolates of fungi from M. fallax or M. hapla were tested for in vitro antagonism against the nematode egg parasitic fungus Verticillium chlamydosporium: 23% of the bacteria and 74% of the fungi showed antagonistic activity. Pseudomonads showed an overall stronger antagonistic activity than the other bacteria. Our conclusions are that Meloidogyne egg masses are a densely populated microbial niche and that their microflora may well be an important factor in determining the success of nematode antagonists. However, we could not find a relationship between the egg mass microflora and differences in soil suppressiveness between the sample sites.


2018 ◽  
Vol 5 (2) ◽  
pp. 224
Author(s):  
Dewa Ayu Andriastini ◽  
Yan Ramona ◽  
Meitini Wahyuni Proborini

A research on in vitro inhibition of fungal antagonists, isolated from dragon fruit plantation in Sembung village, Bali, on Fusarium sp. (the disease causative agent of dragon fruit plant) was conducted with the main objective to investigate the effectiveness of these fungal antagonists to inhibit the in vitro growth of the pathogen. Dual assay method was applied in this experiment. The results showed that three potential fungal antagonists were successfully isolated in this research and they were identified as Trichoderma harzianum, Aspergillus niger, dan Paecilomyces lilacinus. All these fungal antagonists showed antagonistic activity against Fusarium sp. which was statistically significant (p<0.05) when compared to control. This indicated that all antagonist isolates were potential to be developed as biocontrol agent candidates.


2018 ◽  
Author(s):  
María Fernanda Jiménez-Reyes ◽  
Héctor Carrasco ◽  
Andrés Olea ◽  
Evelyn Silva-Moreno

Fungi are the primary infectious agents in plants causing significant economic losses in agroindustry. Traditionally, these pathogens have been treated with different synthetic fungicides such as hydroxianilides, anilinopyrimidines, and azoles, to name a few. However, the indiscriminate use of these chemicals has increased fungi resistance in plants. Natural products have been researched as a control, and an alternative to these synthetic fungicides since they are not harmful to health and contribute to the environment caring. This review describes plants extracts, essential oils, and active compounds or secondary metabolites as antifungal agents both, in vitro and in vivo. Active compounds have been recently described as the best candidates for the control of phytopathogenic fungi. When metabolized by plants, these compounds concentrations rely on the environmental conditions and pathogens incidence. However, one issue regarding the direct application of these preformed compounds in plants touch upon their low persistence in the environment, and their even lower bioavailability than synthetic fungicides. Hence the challenge is to develop useful formulations based on natural products to increase the compounds solubility facilitating thus their application in the field while maintaining their properties.


2021 ◽  
Vol 48 (3) ◽  
Author(s):  
Hind Lahmyed ◽  
◽  
Rachid Bouharroud ◽  
Redouan Qessaoui ◽  
Abdelhadi Ajerrar ◽  
...  

The present work aims to isolate actinomycete bacteria with antagonistic abilities towards Botrytis cinerea, the causal agent of gray mold, from a soil sample collected from the rhizosphere of a healthy tomato grove. In vitro confrontation led to the isolation of 104 actinomycete isolates; fifteen isolates have shown the most significant mortality rate of the mycelial growth of B. cinerea (>50%). Based on the results of this screening, representative strains were selected to verify their in vivo antagonistic activity on tomato fruits; the reduction of B. cinerea has a percentage ranging from 52.38% to 96.19%. Furthermore, the actinomycete isolates were evaluated for their plant growth-promoting (PGP) properties and their ability to produce biocontrol-related extracellular enzymes viz., amylase, protease, cellulase, chitinase, esterases, and lecithinase. Indeed, Ac70 showed high β-1,3-glucanase activity and siderophore production (17U/ml and 43% respectively), and the highest chitinase activity (39μmol/ml) was observed for Ac24. These results indicated that these actinomycetes might potentially control gray mold caused by B. cinerea on tomato fruits. Investigations on enhancing the efficacy and survival of the biocontrol agent in planta and finding out the best formulation are recommended for future research.


Author(s):  
Chu Thanh Binh ◽  
Nguyen Phuong Nhue ◽  
Ho Tuyen ◽  
Bui Thi Viet Ha

The nematophagous – fungi Paecilomyces sp. is curently developed as a biocontrol agent against plant parasitic nematodes (Khan et al., 2003; Yang et al., 2007). Biological control agents can infiltrate certain nematode sites and destroy them by producing some enzymes including chitinase (Khadijeh et al., 2017). The purpose of this study was to purify, determine the chitinase activity from Paecilomyces sp. P1. With Lugol reagent, chitinase of this strain was characterized by diffusion on agar plate. Chitinase specific activity was determined by measuring the release of reducing saccharides from colloidal chitin by the N-acetyl-glucosamine-dinitrosalicylate method at 540 nm. By using the saturated (NH4)2SO4 precipitation at 65% concentration, DEAE A-50 ion exchange chromatography and SDS - PAGE concentration 12.5%, chitinase molecules weigh nearly 50kDa, having a specific activity of 133,3 U/mg, 2,1-fold higher than that of supernatant. Furthermore, method of testing with the nematode Meloidogyne sp., the ability to kill nematodes of Paecilomyces sp. P1 reached 58% efficiency in 96h. These results were a scientific basis for the application of Paecilomyces sp. P1 in the production of nematode insecticides. Keywords Paecilomyces sp. P1; chitinase; purify, biocontrol, Meloidogyne sp References   [1] Nguyễn Ngọc Châu, Tuyến trùng thực vật và cơ sở phòng trừ, NXBKHKTHN, 2003.[2] Nguyễn Hữu Quân, Vũ Văn Hạnh, Quyền Đình Thi, Phạm Thị Huyền, Tinh sạch và đánh giá tính chất lý hóa của chitinase từ nấm Lecanicillium lecanii, Kỷ yếu Hội nghị Công nghệ Sinh học toàn quốc, 1 (2013) 426.[3] CM Baratto, V Dutra, JT Boldo, LB Leiria, MH Vainstein, A. Schrank Isolation, characterization and transcriptional analysis of the chitinase chi2 gene (DQ011663) from the biocontrol fungus Metarhizium anisopliae var. anisopliae., Curr Microbiol, 53 (2006) 217.[4] D. Wharton,. Nematode eggshells, Parasitology 81 (1980) 447.[5] F. A. Zaki, D. S. Bhatti , Effect of castor (Ricinus communus) and the biocontrol fungus Paecilomyces lilacinus on Meloidogyne javanica, Nematologica 36 (1980) 114.[6] H. M. Hussein Al Ajrami., Evaluation the Effect of Paecilomyces lilacinus as a Biocontrol Agent of Meloidogyne javanica on Tomato in Gaza Strip, Faculty of science Master of Biological Sciences Microbiology., 2016.[7] J. De la Cruz, A Hidalgo-Gallego, JM Lora, T Benitez, JA Pintor-Toro, A Llobell , Isolation and characterization of three chitinases from Trichoderma harzianum., Eur. J. Biochem,. 206 (1992) 859.[8] JLD Marco, MC Valadares-Inglis . Purification and characterization of an N-acetylglucosaminidase produced by a Trichodermaharzianum strain which controls Crinipellis perniciosa. Appl. Microbiol. Biotechnol. 64 (2003) 70.[9] JLD Marco , LHC Lima, MV Sousa MV, CR Felix A Trichoderma harzianum chitinase destroys the cell wall of the phytopathogen Crinipellis perniciosa, the causal agent of witches’ broomof cocoa, J Microbiol Biotechnol 16 (2000) 383.[10] Khan Alamgir, Williams Keith, Mark P. Molloy, and Nevalainen Henlena, Purification and characterization of a serine protease and chitinases from Paecilomyces lilacinus and detection of chitinase activity on 2D gels, Protein Expression and Purification 32 (2003) 210.[11] Khadijeh Abbsi, Doustmorad ZAFARI, Robert WICK., Evaluation of chitinase enzyme in fungal isolates obtained from golden potato cyst nematode (Globodera rostochiensis) Zemdirbyste-Agriculture, 2 (2017) 179.[12] Kopparapu Narasimha Kumar, Peng Zhou, Shuping Zhang, Qiaojuan Yan, Zhuqing Liu, Zhengqiang Jiang, Purification and characterization of a novel chitinase gene from Paecilomyces thermophila expressed in Escherichia coli. Carbonhydrate Reseach 347 (2012) 155.[13] Methanee Homthong, Anchanee Kubera, Matana Srihuttagum, Vipa Hongtrakul, Isolation and characterization of chitinase from soil fungi, Paecilomyces sp. Agriculture and Natural Resources, 1 (2016) 50.[14] RS Patil, V Ghormade, MV Desphande MV ,Chitinolytic enzymes: an exploration. Enzyme Microb. Technol. 26 (2002) 473[15] RJ Leger St , RM Cooper, AK Charnley, Characterization of chitinase and chitobiase produced by the entomopathogenic fungus Metarhizium anisopliae. J. Invertebr. Pathol. 58 (1991) 415.[16] S Leger, RJ Joshi RJ, RJ Bidochka, DW Roberts . Characterization and ultrastructural localization of Metarhizium anisopliae, M. xavoviride, and Beauveria bassiana during fungal invasion of host (Manduca sexta) cuticle. Appl Environ Microbiol 62 (1996)907.[17] SC Kang, S. Park, DG Lee ,, Purification and characterization of a novel chitinase from the entomopathogenic fungus, Metarhiziumanisopliae. J Invertebr Pathol., 73 (1999) 276.[18] P.J.M Bonants, P.F.L. Fitters, H. Thijs, E. den Belder, C. Waalwijk, J.W.D.M. Henfling. A basic serine protease from Paecilomyces lilacinus with biological activity against Meloidogyne hapla eggs, Microbiology 141(1995) 75.[19] VE Tikhonov, LV Lopez-Llorca, J Salinas, HB Jansson . Purification and characterization of chitinases from the nematophagous fungi Verticillium chlamydosporium and V. suchlasporium, Fungal Genet Biol (2002) 67[20] Van Nam Nguyen, YJ Kim, KT Oh, WJ Jung, RD Park , The antifungal activity of chitinases from Trichoderma aureoviride DY-59 and Rhizopus microsporus VS-9. Curr. Microbiol 56 (2008) 28.[21] Van Nam Nguyen, In-Jae Oh, Young-Ju Kim, Kil-Yong Kim, Young-Cheol Kim, Ro-Dong Par J Ind., Purification and characterization of chitinases from Paecilomyces variotii DG-3 parasitizing on Meloidogyne incognita eggs, (2009) 195[22] Z. Perveen and S. Shahzad S., , A comparative study of the efficacy of Paecilomyces species against root-knot nematode Meloidogyne incognita. Pakistan Journal of Nematology, 31 (2013) 125


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