scholarly journals Early-Life Development of the Bifidobacterial Community in the Infant Gut

2021 ◽  
Vol 22 (7) ◽  
pp. 3382
Author(s):  
Silvia Saturio ◽  
Alicja M. Nogacka ◽  
Marta Suárez ◽  
Nuria Fernández ◽  
Laura Mantecón ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Gestational Age ◽  
Early Life ◽  
Feeding Habits ◽  
Its Region ◽  
23S Rrna ◽  
Delivery Mode ◽  
Short And Long Term ◽  
Quantitative Changes ◽  
The Impact

The establishment of the gut microbiota poses implications for short and long-term health. Bifidobacterium is an important taxon in early life, being one of the most abundant genera in the infant intestinal microbiota and carrying out key functions for maintaining host-homeostasis. Recent metagenomic studies have shown that different factors, such as gestational age, delivery mode, or feeding habits, affect the gut microbiota establishment at high phylogenetic levels. However, their impact on the specific bifidobacterial populations is not yet well understood. Here we studied the impact of these factors on the different Bifidobacterium species and subspecies at both the quantitative and qualitative levels. Fecal samples were taken from 85 neonates at 2, 10, 30, 90 days of life, and the relative proportions of the different bifidobacterial populations were assessed by 16S rRNA–23S rRNA internal transcribed spacer (ITS) region sequencing. Absolute levels of the main species were determined by q-PCR. Our results showed that the bifidobacterial population establishment is affected by gestational age, delivery mode, and infant feeding, as it is evidenced by qualitative and quantitative changes. These data underline the need for understanding the impact of perinatal factors on the gut microbiota also at low taxonomic levels, especially in the case of relevant microbial populations such as Bifidobacterium. The data obtained provide indications for the selection of the species best suited for the development of bifidobacteria-based products for different groups of neonates and will help to develop rational strategies for favoring a healthy early microbiota development when this process is challenged.

Eczema-protective probiotic alters infant gut microbiome functional capacity but not composition: sub-sample analysis from a RCT

2019 ◽  
Vol 10 (1) ◽  
pp. 5-17 ◽  
Author(s):  
R. Murphy ◽  
X.C. Morgan ◽  
X.Y. Wang ◽  
K. Wickens ◽  
G. Purdie ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Functional Capacity ◽  
Early Life ◽  
Post Partum ◽  
Lactobacillus Rhamnosus ◽  
Delivery Mode ◽  
Sequencing Analysis ◽  
Metagenomic Sequencing ◽  
Microbiota Composition ◽  
The Impact

Probiotic Lactobacillus rhamnosus HN001 given in early life has been shown to reduce infant eczema risk, but its effect on gut microbiota development has not been quantitatively and functionally examined. The aim of this study was to investigate the impact of early life probiotic exposure on the composition and functional capacity of infant gut microbiota from birth to 2 years considering the effects of age, delivery mode, antibiotics, pets and eczema. We performed shotgun metagenomic sequencing analysis of 650 infant faecal samples, collected at birth, 3, 12, and 24 months, as part of a randomised, controlled, 3-arm trial assessing the effect of L. rhamnosus HN001, Bifidobacterium animalis subsp. lactis HN019 supplementation on eczema development in 474 infants. There was a 50% reduced eczema risk in the HN001 probiotic group compared to placebo. Both mothers (from 35 weeks gestation until 6 months post-partum if breastfeeding) and infants (from birth to 2 years) received either a placebo or one of two probiotics, L. rhamnosus HN001 (6×109 cfu), or B. animalis subsp. lactis HN019 (9×109 cfu). L. rhamnosus HN001 probiotic supplementation was associated with increased overall glycerol-3 phosphate transport capacity and enrichment of L. rhamnosus. There were no other significant changes in infant gut microbiota composition or diversity. Increased capacity to transport glycerol-3-phosphate was positively correlated with relative abundance of L. rhamnosus. Children who developed eczema had gut microbiota with increased capacity for glycosaminoglycan degradation and flagellum assembly but had no significant differences in microbiota composition or diversity. Early life HN001 probiotic use is associated with both increased L. rhamnosus and increased infant gut microbiota functional capacity to transport glycerol-3 phosphate. The mechanistic relationship of such functional alteration in gut microbiota with reduced eczema risk and long-term health merits further investigation.

The Microbiota and Malnutrition: Impact of Nutritional Status During Early Life

2019 ◽  
Vol 39 (1) ◽  
pp. 267-290 ◽  
Author(s):  
Carlos Gómez-Gallego ◽  
Izaskun García-Mantrana ◽  
Cecilia Martínez-Costa ◽  
Seppo Salminen ◽  
Erika Isolauri ◽  
...  
Keyword(s):  
Nutritional Status ◽  
Gut Microbiota ◽  
Early Life ◽  
Complex Interaction ◽  
Developmental Origins ◽  
Health And Disease ◽  
Risk Of Disease ◽  
Short And Long Term ◽  
The Impact

According to the developmental origins of health and disease hypothesis, our health is determined by events experienced in utero and during early infancy. Indeed, both our prenatal and postnatal nutrition conditions have an impact on the initial architecture and activity of our microbiota. Recent evidence has underlined the importance of the composition of the early gut microbiota in relation to malnutrition, whether it be undernutrition or overnutrition, that is, in terms of both stunted and overweight development. It remains unclear how early microbial contact is linked to the risk of disease, as well as whether alterations in the microbiome underlie the pathogenesis of malnutrition or are merely the end result of it, which indicates that thequestion of causality must urgently be answered. This review provides information on the complex interaction between the microbiota and nutrition during the first 1,000 days of life, taking into account the impact of both undernutrition and overnutrition on the microbiota and on infants’ health outcomes in the short- and long-term.

scholarly journals Correction: N-3 Polyunsaturated Fatty Acids (PUFAs) Reverse the Impact of Early-Life Stress on the Gut Microbiota

PLoS ONE ◽  
2015 ◽  
Vol 10 (10) ◽  
pp. e0142228 ◽  
Author(s):  
Matteo M. Pusceddu ◽  
Sahar El Aidy ◽  
Fiona Crispie ◽  
Orla O’Sullivan ◽  
Paul Cotter ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Gut Microbiota ◽  
Polyunsaturated Fatty Acids ◽  
Life Stress ◽  
Early Life ◽  
Early Life Stress ◽  
The Impact

scholarly journals The effects of gestational age on the composition and predicted function of gut microbiota in neonates and early infants

2021 ◽  
Vol 12 (2) ◽  
pp. 567-573
Author(s):  
Kaiyu Pan ◽  
Lianfang Yu ◽  
Chengyue Zhang ◽  
Jianhua Zhan ◽  
Rongliang Tu
Keyword(s):  
Gut Microbiota ◽  
Gestational Age ◽  
Full Term ◽  
Rrna Gene ◽  
Delivery Mode ◽  
16S Sequencing ◽  
Α Diversity ◽  
Preterm Group ◽  
Stool Samples ◽  
Predicted Function

Gut microbiota can influence cell differentiation, metabolism, and immune function and is key for the normal development and future health of early infants. Several factors have been reported to be related to the microbiota composition of neonates, such as gestational age, delivery mode, feeding method, antibiotics consumption, and ethnicity, among others. So we investigated the relationship between gestational age and the composition and predicted function of the gut microbiota of neonates and early infants by sequencing the 16S rRNA gene present in stool samples obtained from 100 prospectively enrolled full-term and preterm newborns. In the 3-day-old neonates samples, the prominent genera in the full-term group were Escherichia-Shigella, Streptococcus, Bifidobacterium, and Bacteroides, while in the preterm group, Staphylococcus, Streptococcus, Escherichia-Shigella and Clostridium were the most abundant genera identified. There were statistical difference between two groups(P<0.05). Moreover, the predominant genera in the full-term group were Bifidobacterium, Lactobacillus, Bacteroides, and Clostridium , whereas the main genera in the preterm group were Escherichia-Shigella, Clostridium, Bifidobacterium and Bacteroides, in stool samples from 30-42-day-old infants. We found the α-diversity in 3-day-old group was significantly lower than in the 30-42-day-old group whether it’s full-term or preterm (P<0.001). Functional inference analysis revealed higher levels of biodegradation and metabolism of carbohydrates, vitamins in the full-term group than in the preterm group, both in neonates and early infants, which may contribute to the stability of the microbiota in the full-term group. There were significant differences in the composition and predicted function of the gut microbiota of early infants due to gestational age. The 16S sequencing technology was an effective and reliable tool in the detection of gut microbiota in early infants.

scholarly journals N-3 Polyunsaturated Fatty Acids (PUFAs) Reverse the Impact of Early-Life Stress on the Gut Microbiota

PLoS ONE ◽  
2015 ◽  
Vol 10 (10) ◽  
pp. e0139721 ◽  
Author(s):  
Matteo M. Pusceddu ◽  
Sahar El Aidy ◽  
Fiona Crispie ◽  
Orla O’Sullivan ◽  
Paul Cotter ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Gut Microbiota ◽  
Polyunsaturated Fatty Acids ◽  
Life Stress ◽  
Early Life ◽  
Early Life Stress ◽  
The Impact

scholarly journals Breastfeeding restored the gut microbiota in caesarean section infants and lowered the infection risk in early life

2020 ◽  
Vol 20 (1) ◽  
Author(s):  
Cheng Guo ◽  
Qian Zhou ◽  
Muxia Li ◽  
Letian Zhou ◽  
Lei Xu ◽  
...  
Keyword(s):  
Caesarean Section ◽  
Gut Microbiota ◽  
Early Life ◽  
Infant Development ◽  
Infection Risk ◽  
Delivery Mode ◽  
Formula Milk ◽  
Time Points ◽  
Faecal Samples ◽  
Over Time

Abstract Background The initialization of the neonatal gut microbiota (GM) is affected by diverse factors and is associated with infant development and health outcomes. Methods In this study, we collected 207 faecal samples from 41 infants at 6 time points (1, 3, and 7 days and 1, 3, and 6 months after birth). The infants were assigned to four groups according to delivery mode (caesarean section (CS) or vaginal delivery (VD)) and feeding pattern (breastfeeding or formula milk). Results The meconium bacterial diversity was slightly higher in CS than in VD. Three GM patterns were identified, including Escherichia/Shigella-Streptococcus-dominated, Bifidobacterium-Escherichia/Shigella-dominated and Bifidobacterium-dominated patterns, and they gradually changed over time. In CS infants, Bifidobacterium was less abundant, and the delay in GM establishment could be partially restored by breastfeeding. The frequency of respiratory tract infection and diarrhoea consequently decreased. Conclusion This study fills some gaps in the understanding of the restoration of the GM in CS towards that in VD.

scholarly journals Does the maternal vaginal microbiota play a role in seeding the microbiota of neonatal gut and nose?

2017 ◽  
Vol 8 (5) ◽  
pp. 763-778 ◽  
Author(s):  
O. Sakwinska ◽  
F. Foata ◽  
B. Berger ◽  
H. Brüssow ◽  
S. Combremont ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Mode Of Delivery ◽  
Similarity Measures ◽  
Vaginal Microbiota ◽  
Minor Role ◽  
Delivery Mode ◽  
Feeding Mode ◽  
Early Maturation ◽  
Stool Microbiota ◽  
The Impact

The acquisition and early maturation of infant microbiota is not well understood despite its likely influence on later health. We investigated the contribution of the maternal microbiota to the microbiota of infant gut and nose in the context of mode of delivery and feeding. Using 16S rRNA sequencing and specific qPCR, we profiled microbiota of 42 mother-infant pairs from the GUSTO birth cohort, at body sites including maternal vagina, rectum and skin; and infant stool and nose. In our study, overlap between maternal vaginal microbiota and infant faecal microbiota was minimal, while the similarity between maternal rectal microbiota and infant microbiota was more pronounced. However, an infant’s nasal and gut microbiota were no more similar to that of its own mother, than to that of unrelated mothers. These findings were independent of delivery mode. We conclude that the transfer of maternal vaginal microbes play a minor role in seeding infant stool microbiota. Transfer of maternal rectal microbiota could play a larger role in seeding infant stool microbiota, but approaches other than the generally used analyses of community similarity measures are likely to be needed to quantify bacterial transmission. We confirmed the clear difference between microbiota of infants born by Caesarean section compared to vaginally delivered infants and the impact of feeding mode on infant gut microbiota. Only vaginally delivered, fully breastfed infants had gut microbiota dominated by Bifidobacteria. Our data suggest that reduced transfer of maternal vaginal microbial is not the main mechanism underlying the differential infant microbiota composition associated with Caesarean delivery. The sources of a large proportion of infant microbiota could not be identified in maternal microbiota, and the sources of seeding of infant gut and nasal microbiota remain to be elucidated.

scholarly journals The Association Between Mode of Delivery and Later Educational Outcomes

2020 ◽  
Vol 5 (5) ◽  
Author(s):  
Eileen Li ◽  
Rebecca Slykerman ◽  
Barry Milne
Keyword(s):  
New Zealand ◽  
Secondary School ◽  
Gut Microbiota ◽  
Vaginal Delivery ◽  
Educational Outcomes ◽  
Educational Achievement ◽  
Mode Of Delivery ◽  
Delivery Mode ◽  
Developmental Problems ◽  
The Impact

IntroductionCaesarean section (C-section) is becoming increasingly prevalent worldwide. It can be a life-saving intervention when medical complications arise, but may cause adverse consequences for the mothers when it is not medically necessary. The upwards trend of C-section is becoming a general concern as it might be associated with a wide range of child outcomes such as immune diseases, respiratory diseases and developmental problems. One underlying mechanism of such association is through gut microbiota. Mode of delivery is a signification factor which determines the gut bacterial environment in early days of life. Gut microbiota can impact cognitive development via microbiota gut brain axis. Objectives and ApproachThis study investigated the association between mode of delivery and later educational outcomes of the children, using linked data from New Zealand Integrated Data Infrastructure. The participants consisted of children born in New Zealand between 1Jan1996 and 31Dec1998. All birth information were retrieved from Department of Internal Affairs and were linked to Ministry of Health data to obtain delivery methods from mothers’ diagnosis records. Once delivery modes were identified, the data was then linked to records from Ministry of Education to obtain children’s educational outcomes at secondary school. Three outcome variables were chosen: University Entrance, Highest Endorsement Level and National Certificate of Educational Achievement Level 2 Percentile Score. ResultsThe results have shown that C-section and assisted vaginal delivery were associated with better secondary school educational achievement, comparing to unassisted vaginal delivery. The results persisted after adjusting for sociodemographic factors such as household income, maternal education and deprivation index; infant factors such as birth weight, gestational age and ethnicity. However, when within family variation was further controlled for in the sibling fixed effects analysis, C-section was no longer associated with improved educational achievement. Conclusion / ImplicationsThis indicated that the impact of delivery mode might be negligible on later educational achievement.

Breastfeeding: a key modulator of gut microbiota characteristics in late infancy

2018 ◽  
Vol 10 (02) ◽  
pp. 206-213 ◽  
Author(s):  
M. Matsuyama ◽  
L. F. Gomez-Arango ◽  
N. M. Fukuma ◽  
M. Morrison ◽  
P. S. W. Davies ◽  
...  
Keyword(s):  
Microbial Community ◽  
Gut Microbiota ◽  
Mode Of Delivery ◽  
Solid Food ◽  
Breastfeeding Duration ◽  
Rrna Gene ◽  
Delivery Mode ◽  
Healthy Children ◽  
Antibiotic Exposure ◽  
The Impact

AbstractThe objective of this study was to investigate the impact of the most commonly cited factors that may have influenced infants’ gut microbiota profiles at one year of age: mode of delivery, breastfeeding duration and antibiotic exposure. Barcoded V3/V4 amplicons of bacterial 16S-rRNA gene were prepared from the stool samples of 52 healthy 1-year-old Australian children and sequenced using the Illumina MiSeq platform. Following the quality checks, the data were processed using the Quantitative Insights Into Microbial Ecology pipeline and analysed using the Calypso package for microbiome data analysis. The stool microbiota profiles of children still breastfed were significantly different from that of children weaned earlier (P&lt;0.05), independent of the age of solid food introduction. Among children still breastfed, Veillonella spp. abundance was higher. Children no longer breastfed possessed a more ‘mature’ microbiota, with notable increases of Firmicutes. The microbiota profiles of the children could not be differentiated by delivery mode or antibiotic exposure. Further analysis based on children’s feeding patterns found children who were breastfed alongside solid food had significantly different microbiota profiles compared to that of children who were receiving both breastmilk and formula milk alongside solid food. This study provided evidence that breastfeeding continues to influence gut microbial community even at late infancy when these children are also consuming table foods. At this age, any impacts from mode of delivery or antibiotic exposure did not appear to be discernible imprints on the microbial community profiles of these healthy children.

The impact of early life gut colonization on metabolic and obesogenic outcomes: what have animal models shown us?

2015 ◽  
Vol 7 (1) ◽  
pp. 15-24 ◽  
Author(s):  
J. G. Wallace ◽  
W. Gohir ◽  
D. M. Sloboda
Keyword(s):  
Animal Models ◽  
Gut Microbiota ◽  
Early Life ◽  
Maternal Obesity ◽  
Communicable Disease ◽  
Critical Periods ◽  
Early Life Adversity ◽  
Gut Colonization ◽  
Increased Risk ◽  
The Impact

The rise in the occurrence of obesity to epidemic proportions has made it a global concern. Great difficulty has been experienced in efforts to control this growing problem with lifestyle interventions. Thus, attention has been directed to understanding the events of one of the most critical periods of development, perinatal life. Early life adversity driven by maternal obesity has been associated with an increased risk of metabolic disease and obesity in the offspring later in life. Although a mechanistic link explaining the relationship between maternal and offspring obesity is still under investigation, the gut microbiota has come forth as a new factor that may play a role modulating metabolic function of both the mother and the offspring. Emerging evidence suggests that the gut microbiota plays a much larger role in mediating the risk of developing non-communicable disease, including obesity and metabolic dysfunction in adulthood. With the observation that the early life colonization of the neonatal and postnatal gut is mediated by the perinatal environment, the number of studies investigating early life gut microbial establishment continues to grow. This paper will review early life gut colonization in experimental animal models, concentrating on the role of the early life environment in offspring gut colonization and the ability of the gut microbiota to dictate risk of disease later in life.

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