PREDICTION OF THE CONDITIONS OF CHEMICAL ORGANIC REACTIONS USING THE EDGE ATTENTION GRAPH CONVOLUTION NETWORK

Author(s):  
Владимир Борисович Москалев

Моделирование структуры химической реактивности с точки зрения структуры участвующих веществ имеет важные последствия во всех областях химии и биохимии, от синтеза до понимания метаболических процессов. Для предсказания условий реакций органической химии на основе графов была взята модель графовой сверточной нейронной сети с механизмом внимания на ребрах Edge Attention Graph Convolution Network. Modeling the structure of chemical reactivity from the point of view of the structure of the substances involved has important consequences in all areas of chemistry and biochemistry, from synthesis to understanding metabolic processes. To predict the reaction conditions of organic chemistry based on graphs, we used the model Edge Attention Graph Convolution Network.

Author(s):  
Ghodsi Mohammadi Ziarani ◽  
Fatemeh Mohajer ◽  
Suraj N. Mali

: 1,8-diaminonaphthalene (1,8-DAN) with special organic structure was applied in organic synthesis to provide efficient complex scaffolds, through the two or four-component fashion. This review highlights its recent application in organic reactions under different conditions and heterogynous catalysts to produce various molecules, which were used as medicines, sensors, and dyes.


Author(s):  
Jie Jack Li ◽  
Chris Limberakis ◽  
Derek A. Pflum

Searching for reaction in organic synthesis has been made much easier in the current age of computer databases. However, the dilemma now is which procedure one selects among the ocean of choices. Especially for novices in the laboratory, it becomes a daunting task to decide what reaction conditions to experiment with first in order to have the best chance of success. This collection intends to serve as an "older and wiser lab-mate" one could have by compiling many of the most commonly used experimental procedures in organic synthesis. With chapters that cover such topics as functional group manipulations, oxidation, reduction, and carbon-carbon bond formation, Modern Organic Synthesis in the Laboratory will be useful for both graduate students and professors in organic chemistry and medicinal chemists in the pharmaceutical and agrochemical industries.


2021 ◽  
Vol 50 (13) ◽  
pp. 4445-4469
Author(s):  
Jimmy Nelson Appaturi ◽  
Rajni Ratti ◽  
Bao Lee Phoon ◽  
Samaila Muazu Batagarawa ◽  
Israf Ud Din ◽  
...  

One of the most crucial attributes of synthetic organic chemistry is to design organic reactions under the facets of green chemistry for the sustainable production of chemicals.


2021 ◽  
Vol 25 ◽  
Author(s):  
Ghodsi Mohammadi Ziarani ◽  
Fatemeh Javadi ◽  
Fatemeh Mohajer

: The role of oxindole derivatives is discussed as starting materials in diverse organic reactions including two and more components between the years 2014 until 2020. Oxindoles are famous because of their biological properties for instance chromanone-fused polycyclic pyrrolidinyl-dispirooxindoles, functionalized polycyclic spiro-fused carbocyclicoxindole, and 3,3-disubstituted oxindoles have anti-cancer, anti-tumor, and anti-microbial properties, respectively. Therefore, various methods for synthesizing the oxindole structures have received more attention in organic chemistry.


2018 ◽  
Vol 14 ◽  
pp. 1655-1659 ◽  
Author(s):  
Ugo Azzena ◽  
Massimo Carraro ◽  
Gloria Modugno ◽  
Luisa Pisano ◽  
Luigi Urtis

The application of heterogeneous catalysis and green solvents to the set up of widely employed reactions is a challenge in contemporary organic chemistry. We applied such an approach to the synthesis and further conversion of tetrahydropyranyl ethers, an important class of compounds widely employed in multistep syntheses. Several alcohols and phenols were almost quantitatively converted into the corresponding tetrahydropyranyl ethers in cyclopentyl methyl ether or 2-methyltetrahydrofuran employing NH4HSO4 supported on SiO2 as a recyclable acidic catalyst. Easy work up of the reaction mixtures and the versatility of the solvents allowed further conversion of the reaction products under one-pot reaction conditions.


Author(s):  
Najib Aragrag ◽  
Dario C. Castiglione

This chapter is intended to provide a general introduction to the laboratory techniques used in polymer synthesis, by focusing on some relatively well-known polymerizations that occur by chain-growth processes. In this way some of the more commonly used procedures in polymer chemistry are described. Due to the nature of the intermediates produced, such as free radicals, carbanions, carbocations, together with a range of organometallic species, the techniques often involve handling compounds in the complete absence of oxygen and moisture. Because of this the best results may require quite sophisticated equipment and glassware; however, it is our intention to show that the general procedures are accessible to any reasonably equipped laboratory, and indeed some of the techniques are suitable for use in an undergraduate teaching laboratory. Chain-growth polymerization involves the sequential step-wise addition of monomer to a growing chain. Usually, the monomer is unsaturated, almost always a derivative of ethene, and most commonly vinylic, that is, a monosubstituted ethane, 1 particularly where the growing chain is a free radical. For such monomers, the polymerization process is classified by the way in which polymerization is initiated and thus the nature of the propagating chain, namely anionic, cationic, or free radical; polymerization by coordination catalyst is generally considered separately as the nature of the growing chain-end may be less clear and coordination may bring about a substantial level of control not possible with other methods. Ring-opening polymerizations exhibit many of the features of chain-growth polymerization, but may also show some of the features expected from stepgrowth polymerizations. However, it is probably fair to say that from a practical point of view the techniques involved are rather similar or the same as those used in chain-growth processes and consequently some examples of ring-opening processes are provided here. It is particularly instructive to consider the requirements of chain-growth compared to step-growth processes in terms of the demands for reagent purity and reaction conditions.


Synthesis ◽  
2020 ◽  
Vol 52 (11) ◽  
pp. 1643-1658
Author(s):  
Sergio H. Szajnman ◽  
Juan B. Rodriguez ◽  
María N. Chao ◽  
Mauricio Cattaneo ◽  
Jonathan Sanchez Gonzalez ◽  
...  

An expedient preparation of selenium-containing hetero­cycles via an m-chloroperbenzoic acid-mediated seleno-annulation starting from selenocyanate derivatives is described. In spite of its significance, this cyclization reaction is virtually understudied not only from the point of view of its scope, but also from the mechanistic aspects associated to this remarkable transformation. In this sense, several selenocyanate and thiocyanate derivatives bearing an aromatic ring were evaluated as substrates under different reaction conditions of this interesting cyclization yielding important insights on its scope as well as relevant information on the reaction mechanism.


Author(s):  
V P Butler ◽  
D Tse-Eng ◽  
H L Nossel

Fibrin II formation may be essential in thrombosis. Measurement of free FPB is the only direct index of fibrin II formation but is complicated by the fact that carboxypeptidase B rapidly cleaves the COOH-terminal arginine from FPB in human plasma. To facilitate the assay of Desarg-FPB as an index of in vivo FPB release, the immuno-chemical reactivity of Desarg-FPB with anti-FPB sera has been studied. As previously reported, Desarg-FPB was considerably less effective (0.7-17%) than FPB in inhibiting the binding of an 125I-FPB analog by five of six rabbit antisera studied in detail. Surprisingly, Desarg-FPB was 4 to 27 times.more effective than FPB in inhibiting the binding of an 125I-Desarg-FPB analog by the six anti-FPB sera. For example, in the case of antiserum R-28, FPB was 145 times more effective than Desarg-FPB in inhibiting the binding of the 125I-FPB analog but Desarg-FPB was 27 times more effective than FPB in inhibiting the binding of the 125I-Desarg-FPB analog. These findings indicate that the FPB and Desarg-FPB analogs are bound by different antibody populations. We suggest that carboxypeptidase B converts some molecules of FPB-protein conjugates to Desarg-FPB derivatives during the immunization of rabbits. From a practical point of view, the difference in reactivity of the different antisera has enabled the rational selection of anti-FPB sera for use in the assay of Desarg-FPB and its distinction from FPB. With the use of an appropriate antiserum, Desarg-FPB levels have been measured in clinical blood samples and the sensitivity is such that distinction can be made between levels in normal individuals and in disease states.


Synlett ◽  
2019 ◽  
Vol 30 (17) ◽  
pp. 2010-2014
Author(s):  
Paolo Vincetti ◽  
Gabriele Costantino ◽  
Maria Grazia Martina ◽  
Marco Radi

Herein, we describe the results of our investigation on the chemical reactivity and versatility of a poorly explored scaffold: 2,4-dichlorofuro[3,4-d]pyrimidin-7-one (3). Highly functionalized pyrimidines can be obtained with a divergent approach by reacting the key intermediate 3 with different amine nucleophiles under carefully controlled reaction conditions. The set-up of a microwave-assisted one-pot, two- or three-step protocol to rapidly generate 2,4,5,6-tetrasubstituted or fused pyrimidines is also reported.


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