INHIBITION OF Fusarium oxysporum Pathogenic Fungus USING COMPOST EXTRACT FROM Chromolaena odorata (SIAM WEED) AND COW DUNG

2018 ◽  
Vol 14 (2) ◽  
pp. 49-57
Author(s):  
A K AKINTOKUN ◽  
P O AKINTOKUN ◽  
A R OLOYEDE
Keyword(s):  
Fusarium Oxysporum ◽  
Pathogenic Fungus ◽  
Diffusion Method ◽  
Cow Dung ◽  
Microbiological Analysis ◽  
Chromolaena Odorata ◽  
Standard Procedures ◽  
Three Samples ◽  
Inhibitory Activities ◽  
Dung Sample

The study was conducted to evaluate the efficacy of composts extract from cow dung and Chromolae-na odorata in controlling Fusarium oxysporum. Three compost samples were prepared in this study from Siam weed (Chromolaena odorata) and cow dung. Sample A was prepared from Cow dung and siam weed at ratio 100g: 100g, Sample B was prepared from 200g chopped siam weed and sample C contained 200g cow dung. These three samples were composted in plastic drums perforated for aera-tion and each sample were replicated three times. The content in the drums were regularly turned and monitored for 1, 10, 30 and 60 days. The microbiological analysis of the composts were determined using standard procedures. The inhibitory activities of the sterilised compost extracts on the F. ox-ysporum were determined using agar well diffusion method. The bacterial, coliform and fungal loads ranged from 1.50 – 9.0 × 107 cfu/ml, 0.3 – 6.0× 107 cfu/ml and 0.1 – 2.50 × 107 cfu/ml respectively. Inhibitory activities of the compost extracts on F. oxysporum at different days of composting increased with days of composting. The highest zone of inhibition was recorded by extract from compost pre-pared from C. odorata at 60 days of composting, closely followed by extract from compost prepared from mixture of cow dung and C. odorata at 60 days of composting. No antifungal activity was found in all extracts from the 24h-composts. Highest disease severity was recorded in extract of 24 h and on control. All extract at 60 days of fermentation were healthy The study therefore revealed the potentials of extracts from Chromolaena odorata and cow dung for the inhibition of Fusarium oxysporum of many crops.

CHANGES IN MICROBIOLOGICAL AND PHYSICO-CHEMICAL PROPERTIES DURING COMPOSTING OF SIAM WEED (Chromolaena odorata) AND COWDUNG

2018 ◽  
Vol 14 (2) ◽  
pp. 40-48
Author(s):  
A K AKINTOKUN ◽  
P O AKINTOKUN ◽  
A O OBAWUSI ◽  
O R LAWAL
Keyword(s):  
Micrococcus Luteus ◽  
Chemical Properties ◽  
Fungal Species ◽  
Cow Dung ◽  
Chromolaena Odorata ◽  
E Coli ◽  
Standard Procedures ◽  
Physico Chemical ◽  
Three Samples ◽  
Phosphorus And Potassium

Three compost samples were prepared in this study from Siam weed (Chromolaena odorata) and cowdung. Sample A was prepared from Cow dung and siam weed at ratio 100g: 100g, Sample B was prepared from 200g chopped siam weed and sample C contained 200g cowdung. These three sam-ples were composted in plastic drums perforated for aeration and each sample were replicated three times. The content in the drums were regularly turned and monitored at 1, 10, 30 and 60 days for mi-crobiological and physicochemical properties. The microbiological and physicochemical analyses of the compost were carried out using standard procedures. Bacterial, Coliform and Fungal count in-creased from day 1 to the 30th day and thereafter decreased from 30th day to the 60th day in all the composting samples. The bacteria species isolated and identified were Pseudomonas fragilis, Pseu-domonas nitrificans, Proteus mirabilis, E. coli, Streptococcus faecium, Micrococcus luteus, Clostridium perfringes, Bacillus cereus, Proteus morganii, Micrococcus acidophilus. Fungal species were Aspergil-lus flavus, Aspergillus fumigatus, Fusarium oxysporium, Penicillum chrysogenum, Aspergillus niger, Mucor sp. and Saccharomyces cerevisiae. The pH of the composted samples ranges between 5.8 to 6.9. The nitrogen, phosphorus and potassium content increased with days of composting but the heavy metals decreased with days of composting. The sulfatase, phosphatase, dehydrogenase, amyl-ase and cellulose enzymes in the three samples increased from day 1 to the 60th day. Sulfatase en-zyme which was the highest ranged from 25 to 76.5% in the three sample, phosphatase (14 to 60.5%), dehydrogenase (20.5 to 55.0%), cellulose (16.5 to 49%) and amylase which was the least enzyme recorded ranged from 5.0 to 38%.

scholarly journals Antimicrobial and Alpha-Amylase Inhibitory Activities of Organic Extracts of Selected Sri Lankan Bryophytes

2020 ◽  
Vol 2020 ◽  
pp. 1-6
Author(s):  
Annalingam Kirisanth ◽  
M. N. M. Nafas ◽  
Ranga K. Dissanayake ◽  
Jayantha Wijayabandara
Keyword(s):  
Inhibitory Activity ◽  
Pathogenic Fungus ◽  
Fungal Species ◽  
Biologically Active ◽  
Alpha Amylase ◽  
Diffusion Method ◽  
Bacterial Strains ◽  
Plant Materials ◽  
Natural Product Research ◽  
Inhibitory Activities

Medicinal plants have been the main focus of natural product research. However, recent research has revealed that lower plants including bryophytes are also a major resource of biologically active compounds with novel structures. Sri Lanka is considered as a biodiversity hotspot with a higher degree of endemism flora including bryophytes. In this study, different species of bryophytes were investigated for their antimicrobial and alpha-amylase inhibitory activities. The air-dried plant materials of 6 different bryophyte species, Marchantia sp., Fissidens sp., Plagiochila sp., Sematophyllum demissum, Hypnum cupressiforme, and Calymperes motley, were subjected to sequential cold extraction with 3 different organic solvents. All three types of organic crude extracts were subjected to screening of antimicrobial bioassays using the disc-diffusion method against 3 bacterial strains and 1 fungal strain. According to the results obtained, 6 extracts out of 18 showed antibacterial activity for tested Gram-positive bacteria and 1 active against Gram-negative bacteria. Two extracts showed activity against the pathogenic fungus strain. Extracts from some plants were active against tested bacterial as well as fungal species. TLC-based bioautographic study was carried out to identify the corresponding active bands which is useful for active compound isolation. Furthermore, the ethyl acetate extracts were subjected to evaluate alpha-amylase inhibitory activity where three extracts out of six extracts showed moderate inhibitory activity for alpha-amylase with IC50 ranging 8–30%.

scholarly journals Development of specific primers for Fusarium oxysporum causing damping off of Lilium formolongi

2020 ◽  
Vol 18 (1) ◽  
Author(s):  
Takeshi Toda ◽  
Shun Hanesaka ◽  
Kuniaki Shishido ◽  
Shin-ichi Fuji ◽  
Hiromitsu Furuya
Keyword(s):  
Fusarium Oxysporum ◽  
Pathogenic Fungus ◽  
Primer Design ◽  
Damping Off ◽  
Specific Primers ◽  
Forma Specialis

AbstractPrimers specific for the hypothetical forma specialis of Fusarium oxysporum were designed to amplify DNA from this pathogenic fungus that infects plants including lilies. The F. oxysporum sequence between the transposal elements han and hop was used for primer design. Three primer pairs designed from this region were confirmed as specific for 24 isolates of F. oxysporum pathogenic to lilies, except for one pathogenic isolates as extraordinary. No amplification was observed from F. oxysporum non-pathogenic to lily, from 12 forma specialis, and 14 fungi and oomycetes concerned with Liliaceae plants. We propose that specific primers designed from this region will be useful to detect isolates of F. oxysporum that are pathogenic to lilies.

scholarly journals Purification, crystallization and preliminary X-ray diffraction analysis of the effector protein PevD1 fromVerticillium dahliae

2012 ◽  
Vol 68 (7) ◽  
pp. 802-805 ◽  
Author(s):  
Lei Han ◽  
Zheng Liu ◽  
Xinqi Liu ◽  
Dewen Qiu
Keyword(s):  
Pathogenic Fungus ◽  
Sodium Formate ◽  
Diffusion Method ◽  
Effector Protein ◽  
X Ray Diffraction ◽  
Hanging Drop ◽  
Dispersion Method ◽  
Data Set ◽  
X Ray ◽  
Anomalous Signal

The effector protein PevD1 from the pathogenic fungusVerticillium dahliaewas purified and crystallized using the hanging-drop vapour-diffusion method. Native crystals appeared in a solution consisting of 4.0 Msodium formate. A native data set was collected at 1.9 Å resolution at 100 K using an in-house X-ray source. Because of the absence of useful methinione in the protein sequence, derivative crystals that contained iodine were obtained by soaking in 1.25 Mpotassium iodide, and a data set that contained anomalous signal was collected using the same X-ray facility at a wavelength of 1.54 Å. The single-wavelength anomalous dispersion method was used to successfully solve the structure based on the anomalous signal generated from iodine.

Microbiological analysis of Udo Anwankwo river in Ikot Ekpene, South-South Nigeria

2021 ◽  
Vol 1 (2) ◽  
pp. 005-011
Author(s):  
Jonathan Okokon Ekanem ◽  
Divine Jacob Ottong
Keyword(s):  
Aspergillus Niger ◽  
Water Sample ◽  
Water Samples ◽  
Total Coliform ◽  
Microbiological Analysis ◽  
Proper Treatment ◽  
Fungal Isolates ◽  
Standard Procedures ◽  
Sampling Points ◽  
Microbial Analysis

The microbiological study of water samples obtained from Udo Anwankwo River was investigated. Water samples were collected from three different sampling points along the course of the river and analyzed using standard procedures. The total bacterial counts, total coliform counts and total fungal counts of the water samples ranged from 2.6×105 to 4.8×105cfu/ml, 1.2×104 to 1.8×105cfu/ml and 0.24×103 to 1.9×103cfu/ml respectively. A total of nine bacteria species belonging to the following genera, Bacillus, Salmonella, Escherichia, Pseudomonas, Micrococcus, Staphylococcus, Vibrio, Enterobacter and Streptococcus were isolated and identified from the samples, while five fungal isolates including members of the genera Aspergillus niger, Mucor, Penicillum, Rhizopus and Fusarium were isolated. The study through microbial analysis has revealed that the river water sample was not free from pathogens and thereby not suitable for potable use. There is need to put adequate measures towards the control of pollution and proper treatment of the water before usage as it contains pathogenic organisms.

GROWTH INHIBITORY ACTIVITIES OF THE RHIZOME CRUDE EXTRACT OF Curcuma longa ON THE HUMAN PATHOGENIC FUNGUS Mucor circinelloides

2020 ◽  
Vol 65 (10) ◽  
pp. 82-91
Author(s):  
Phuong Nguyen Anh ◽  
Mai Le Thi Tuyet ◽  
Trung Trieu Anh
Keyword(s):  
Antifungal Activity ◽  
Crude Extract ◽  
Fungal Infections ◽  
Early Stage ◽  
Curcuma Longa ◽  
Pathogenic Fungus ◽  
Mucor Circinelloides ◽  
Antifungal Drugs ◽  
Diffusion Method ◽  
Dilution Method

Mucormycosis is an uncommon but life-threatening invasive fungal infection, mostly occurs in immunocompromised patients. Lacking the appropriate antifungal drugs is one of the reasons that lead to difficulties in the management of mucormycosis. Curcuma longa has been used traditionally and widely to treat various diseases, including fungal infections. In the search for novel antifungal compounds from natural resources, we evaluated the effect of rhizome crude extract of C. longa on Mucor circinelloides – a causal agent of mucormycosis. The results of screening, using broth dilution method and agar-well diffusion method, showed that the C. longa extract exhibited promising antifungal activity against the fungus M. circinelloides. In liquid medium, C. longa extract decreased the ability of spore germination and the speed of hyphae formation of M. circinelloides decreased by up to approximately 70% and 90%, respectively. Besides, in a solid medium, the crude extract presented similar activity with amphotericin B (400 μg\mL) in decreasing the growth of M. circinelloides by nearly 77%. Moreover, the extract of C. longa also likely to induce the yeast-like type of growth of the dimorphic M. circinelloides in the early stage. These results suggest the plant could be a potential source for further study on biochemical components and the mechanism of its antifungal activity.

scholarly journals UJI DAYAHAMBAT EUGENOL DARI DAUN CENGKEH HASIL FRAKSINASI TERHADAP PERTUMBUHAN JAMUR PATOGEN Fusarium oxysporum f.sp. Cubense Eugenol Inhibitory Test From Clove Leaf Fractionation Of Fungal Patogen Growth Fusarium oxysporum f.sp. cubense

AgriPeat ◽  
2019 ◽  
Vol 20 (02) ◽  
pp. 107-113
Author(s):  
Admin Journal
Keyword(s):  
Fusarium Oxysporum ◽  
Vacuum Distillation ◽  
Pathogenic Fungus ◽  
Lethal Concentration ◽  
In Vitro Tests ◽  
In Vitro Test ◽  
Microsoft Excel ◽  
Vitro Test

ABSTRACTThis study aims to determine the inhibition of eugenol derived from fractionation clove leaf essentialoils (CLEO) on the growth of pathogenic fungus Fusarium oxysporum f. sp. cubense (Foc) and LC50(Lethal Concentration 50). This research was in vitro, started with purification of clove leaf essentialoil, fractionation by vacuum distillation and bioassay. In vitro tests include exploration of minimuminhibition and preventability tests. Data were analyzed with Microsoft Excel 2010 program. Theresults of minimum inhibition showed at 218,75 ppm concentration of each level was able to inhibitthe growth of Foc fungi. The minimum inhibition exploration was carried out at 218,75 ppm, 109,38ppm, 54,69 ppm and 27,34 ppm. Exploration results showed that fractionated CLEO has been able toinhibit the growth of Foc fungi at 27,34 ppm in the amount of 15,60%. This concentration is used asthe lowest concentration in the inhibitory test. Furthermore, the inhibitory test was carried out startingat the highest concentration of 218,75 ppm, 109,38 ppm, 54,69 ppm and 27,34 ppm. Observationswere made for 7 days after inoculation (DAI). The results showed the best inhibition was at aconcentration of 218,75 ppm at 90,70% and LC50 at 11.17 µL.Keywords: CLEO, fractionation, Foc, in vitro test and LC50

scholarly journals The sss Colonization Gene of the Tomato-Fusarium oxysporum f. sp. radicis-lycopersici Biocontrol Strain Pseudomonas fluorescens WCS365 Can Improve Root Colonization of Other Wild-type Pseudomonas spp. Bacteria

2000 ◽  
Vol 13 (11) ◽  
pp. 1177-1183 ◽  
Author(s):  
Linda C. Dekkers ◽  
Ine H. M. Mulders ◽  
Claartje C. Phoelich ◽  
Thomas F. C. Chin-A-Woeng ◽  
André H. M. Wijfjes ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Pseudomonas Fluorescens ◽  
Pathogenic Fungus ◽  
Cell Types ◽  
Disease Suppression ◽  
Systemic Resistance ◽  
Root Tip ◽  
Wild Type ◽  
Tomato Root ◽  
Colonization Ability

We show that the disease tomato foot and root rot caused by the pathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici can be controlled by inoculation of seeds with cells of the efficient root colonizer Pseudomonas fluorescens WCS365, indicating that strain WCS365 is a bio-control strain. The mechanism for disease suppression most likely is induced systemic resistance. P. fluorescens strain WCS365 and P. chlororaphis strain PCL1391, which acts through the production of the antibiotic phenazine-1-carboxamide, were differentially labeled using genes encoding autofluorescent proteins. Inoculation of seeds with a 1:1 mixture of these strains showed that, at the upper part of the root, the two cell types were present as microcolonies of either one or both cell types. Microcolonies at the lower root part were predominantly of one cell type. Mixed inoculation tended to improve biocontrol in comparison with single inoculations. In contrast to what was observed previously for strain PCL1391, mutations in various colonization genes, including sss, did not consistently decrease the biocontrol ability of strain WCS365. Multiple copies of the sss colonization gene in WCS365 improved neither colonization nor biocontrol by this strain. However, introduction of the sss-containing DNA fragment into the poor colonizer P. fluorescens WCS307 and into the good colonizer P. fluorescens F113 increased the competitive tomato root tip colonization ability of the latter strains 16- to 40-fold and 8- to 16-fold, respectively. These results show that improvement of the colonization ability of wild-type Pseudomonas strains by genetic engineering is a realistic goal.

scholarly journals Bacteraemia and antibiotic susceptibility pattern of isolates from patients visiting a private hospital of Kathmandu

2018 ◽  
Vol 5 ◽  
pp. 39-44
Author(s):  
Nandalal Jaishi ◽  
Pramila Pathak ◽  
Pradeep Kumar Shah ◽  
Puspa Raj Dahal
Keyword(s):  
Antibiotic Susceptibility ◽  
Blood Stream Infection ◽  
Empirical Therapy ◽  
Blood Stream ◽  
Salmonella Typhi ◽  
Diffusion Method ◽  
Microbiological Analysis ◽  
Gram Positive ◽  
Gram Negative ◽  
Causative Agents

Background: Bacteraemia can develop a broad array of complications that may be difficult to recognize initially and can increase morbidity. The study was thus conducted to identify the causative agents of bacteraemia and to assess antibiogram of the isolates among the patients suspected of blood stream infection visiting Everest hospital, New Baneshwor Kathmandu. Methods: Altogether 400 blood cultures were processed during March, 2015 to August, 2015. Standard Operating Procedures (SOPs) was followed during the processing of the specimens. Antibiotic susceptibility testing of bacterial isolates was done by Kirby Bauer disc diffusion method with Muller-Hinton agar using the guidelines and interpretive criteria of the Clinical and Laboratory Standards Institute (CLSI 2013). Result: The positivity of blood culture was found to be 48 (12%). Gram negative bacterial were found to be more predominant 27(56.2%) than gram positive bacteria 21(43.7%) in causing bacteraemia. The most prevalent isolate was Staphylococcus aureus 15 (31.2%) followed by Salmonella Paratyphi A 10 (20.8%) and Salmonella Typhi 8 (16.6%), E. coli & CoNS 4 (8.3%), Pseudomonas aeruginosa 3 (6.2%) and Klebsiella pneumoniae & Streptococcus pneumoniae 2 (4.1%) respectively. All gram-positive isolates were found to be sensitive to Cefoxitin, Ceftriaxone and Vancomycin followed by Ampicillin (90.42%), Erythromycin (85.71%), Ciprofloxacin (83.33%), Doxycycline (75%) and Cephalexin (70.58%) whereas gram negative isolates were sensitive to Ceftriaxone followed by Chloramphenicol (92%), Gentamicin (88.8%), Cefixime (85.71%), Ofloxacin (83.3%) and Amoxycillin and Ciprofloxacin (71.3%) Conclusion: The isolation of etiological agents of blood stream infection should be assessed by proper microbiological analysis and it would be helpful for controlling of the outbreaks of resistance strains through effective empirical therapy.

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