scholarly journals Transplantation of the Mediterranean seagrass Posidonia oceanica through naturalistic engineering techniques: value, weakness and further improvements

2015 ◽  
Author(s):  
Stefano Acunto ◽  
Luigi Piazzi ◽  
Francesco L. Cinelli ◽  
Anna Maria De Biasi ◽  
Lorenzo Pacciardi ◽  
...  
Keyword(s):  
Environmental Conditions ◽  
Large Scale ◽  
Focal Point ◽  
Posidonia Oceanica ◽  
Hydrodynamic Conditions ◽  
Coastal System ◽  
Pros And Cons ◽  
The Mediterranean ◽  
Selection Of

Transplantation of seagrasses is considered a useful method to favour the recovery of degraded meadows. Hence, many projects have been carried out worldwide and a manifold of techniques have been applied. However, the choice of transplantation procedures remains a main problem to be assessed. In order to optimize efforts and to minimize risks of plants loss, the applied methodologies should take into account typology of hosting substratum, hydrodynamic conditions, depth and seagrass species. Due to their fundamental ecological role in the Mediterranean coastal system, many restoration projects aiming to preserve Posidonia oceanica meadows took place in the last decades. Several transplantation techniques have produced different results. In fact the same transplanting methodology may originate diverse results under different environmental conditions. Recently, naturalistic engineering techniques developed on land, have been used for transplantations of P. oceanica. Pilot projects concerning small surfaces were carried out between 2006 and 2010. More recently, a large-scale program (0.1 km2) was realized in 2012 at Civitavecchia (Roma, Thyrrenian Sea). The applied technique consists basically of mattresses filled with sand coupled with a net covering able to hold steady in situ the plant rhizomes. These structures have been variously modified in time to be adapted to the different type of substratum and various hydrodynamic conditions of the transplanting sites. Following the results of these transplantation experiences, we analyzed pros and cons of the techniques in order to improve the methodology. Firstly, these techniques may be considered suitable to large-scale projects allowing to minimize transplantation times. Secondly, the rhizomes may be successfully fixed to the structures; the majority of the transplanted shoots was not damaged showing a very good vegetative vitality with the production of new rhizomes, leaves and roots few months after transplanting. Finally, this procedure is flexible, as the basic technique can be modified and tailored to the various environmental conditions of the different receiving site. However, the results obtained in different areas are highly heterogeneous suggesting that a careful selection of the hosting site is a focal point. To this aim, a pilot study before the beginning of large-scale project seems mandatory, providing a fundamental support to guarantee successful results.

scholarly journals Transplantation of the Mediterranean seagrass Posidonia oceanica through naturalistic engineering techniques: value, weakness and further improvements

2015 ◽  
Author(s):  
Stefano Acunto ◽  
Luigi Piazzi ◽  
Francesco L. Cinelli ◽  
Anna Maria De Biasi ◽  
Lorenzo Pacciardi ◽  
...  
Keyword(s):  
Environmental Conditions ◽  
Large Scale ◽  
Focal Point ◽  
Posidonia Oceanica ◽  
Hydrodynamic Conditions ◽  
Coastal System ◽  
Pros And Cons ◽  
The Mediterranean ◽  
Selection Of

Transplantation of seagrasses is considered a useful method to favour the recovery of degraded meadows. Hence, many projects have been carried out worldwide and a manifold of techniques have been applied. However, the choice of transplantation procedures remains a main problem to be assessed. In order to optimize efforts and to minimize risks of plants loss, the applied methodologies should take into account typology of hosting substratum, hydrodynamic conditions, depth and seagrass species. Due to their fundamental ecological role in the Mediterranean coastal system, many restoration projects aiming to preserve Posidonia oceanica meadows took place in the last decades. Several transplantation techniques have produced different results. In fact the same transplanting methodology may originate diverse results under different environmental conditions. Recently, naturalistic engineering techniques developed on land, have been used for transplantations of P. oceanica. Pilot projects concerning small surfaces were carried out between 2006 and 2010. More recently, a large-scale program (0.1 km2) was realized in 2012 at Civitavecchia (Roma, Thyrrenian Sea). The applied technique consists basically of mattresses filled with sand coupled with a net covering able to hold steady in situ the plant rhizomes. These structures have been variously modified in time to be adapted to the different type of substratum and various hydrodynamic conditions of the transplanting sites. Following the results of these transplantation experiences, we analyzed pros and cons of the techniques in order to improve the methodology. Firstly, these techniques may be considered suitable to large-scale projects allowing to minimize transplantation times. Secondly, the rhizomes may be successfully fixed to the structures; the majority of the transplanted shoots was not damaged showing a very good vegetative vitality with the production of new rhizomes, leaves and roots few months after transplanting. Finally, this procedure is flexible, as the basic technique can be modified and tailored to the various environmental conditions of the different receiving site. However, the results obtained in different areas are highly heterogeneous suggesting that a careful selection of the hosting site is a focal point. To this aim, a pilot study before the beginning of large-scale project seems mandatory, providing a fundamental support to guarantee successful results.

Observations of the Particle Size Distribution and Concentration in a Coastal System using an In Situ Laser Analyzer

2002 ◽  
Vol 36 (1) ◽  
pp. 59-69 ◽  
Author(s):  
Teresa Serra ◽  
Xavier Casamitjana ◽  
Jordi Colomer ◽  
Timothy C. Granata
Keyword(s):  
Particle Size ◽  
Particle Size Distribution ◽  
Water Column ◽  
Size Distribution ◽  
Posidonia Oceanica ◽  
High Energy ◽  
Suspended Particles ◽  
Energy Conditions ◽  
Coastal System

An in situ laser particle size analyzer (LISST-100, Sequoia Scientific, Inc.) has been used to study the particle size distribution and concentration of biological and non biological particles in the water column of a Mediterranean coastal system. Two field campaigns have been carried out during low and high energy conditions of the flow, caused by the passage of a storm front. For the low energy period, the water column remained stratified, whereas for the high energetic period the water column was warmer and well mixed. The first study dealt with the distribution of particles near the bottom of the coastal area. Here, two regions were taken into account. The first region was a sea-grass meadow of Posidonia oceanica and the second region was a barren sand area. The second study dealt with the determination of the vertical distribution of suspended particles in the whole water column of the system. The results showed a decrease in the vertical concentration of suspended particles in the water column with the passage of the storm front, which was associated with advection of warm water mass rather than by vertical mixing. In contrast, vertical resuspension determined the fate of suspended particles at the bottom of the water column and an increase of their concentration was found.

scholarly journals The Management of the Beach-Cast Seagrass Wracks—A Numerical Modelling Approach

2020 ◽  
Vol 8 (11) ◽  
pp. 873
Author(s):  
Andrea Cucco ◽  
Giovanni Quattrocchi ◽  
Walter Brambilla ◽  
Augusto Navone ◽  
Pieraugusto Panzalis ◽  
...  
Keyword(s):  
Winter Season ◽  
Numerical Approach ◽  
Posidonia Oceanica ◽  
Western Mediterranean ◽  
Western Mediterranean Sea ◽  
Hydrodynamic Wave ◽  
Selection Of ◽  
Beach Cast ◽  
Modelling Approach

Seagrass wrack are commonly found on the beach face of the sandy shore all around the world and often persists in situ during the whole year, favouring the emergence of conflicts for the use of the sandy coasts for bathing or for other recreational purposes. As a consequence, these deposits are often removed from the beach during the summer months, temporary stocked, and relocated on the shore face in the next autumn or winter season. The selection of the sites on the shoreline where the leaves should be released before the storms season is often an issue, considering the optimization needs between the transportation costs and the oceanographic features of the dumping site. In this study, a numerical approach was proposed to identify the most suitable areas for the autumnal repositioning of the seagrass wracks for two beaches of Sardinia, an island located in the Western Mediterranean Sea where Posidonia oceanica (L. Delile, 1813) is the most widespread seagrass species. The method is based on the use of hydrodynamic, wave, and particle tracking models and provides important indications useful for the management of this type of practice that can be extended to all different type of beaches along the Mediterranean coasts.

A high resolution reanalysis for the Mediterranean Sea

2021 ◽  
Author(s):  
Romain Escudier ◽  
Emanuela Clementi ◽  
Mohamed Omar ◽  
Andrea Cipollone ◽  
Jenny Pistoia ◽  
...  
Keyword(s):  
High Resolution ◽  
Mediterranean Sea ◽  
Large Scale ◽  
Thermohaline Circulation ◽  
Deep Convection ◽  
Horizontal Resolution ◽  
Continuous Increase ◽  
The Past ◽  
The Mediterranean

<p>In order to be able to predict the future ocean climate and weather, it is crucial to understand what happened in the past and the mechanisms responsible for the ocean variability. This is particularly true in a complex area such as the Mediterranean Sea with diverse dynamics such as deep convection and thermohaline circulation or coastal hydrodynamics. To this end, effective tools are reanalyses or reconstructions of the past ocean state. </p><p>Here we present a new physical reanalysis of the Mediterranean Sea at high resolution, developed in the Copernicus Marine Environment Monitoring Service (CMEMS) framework. The hydrodynamic model is based on the Nucleus for European Modelling of the Ocean (NEMO) combined with a variational data assimilation scheme (OceanVar).</p><p>The model has a horizontal resolution of 1/24<strong>°</strong> and 141 vertical z* levels and provides daily and monthly 3D values of temperature, salinity, sea level and currents. Hourly ECMWF ERA-5 atmospheric fields force the model and daily boundary conditions in the Atlantic are taken from the global CMCC C-GLORS reanalysis. 39 rivers model the freshwater input to the basin plus the Dardanelles. The reanalysis covers 33-years, initialized from SeaDataNet climatology in January 1985, getting to a nominal state after a two-years spin-up and ending in 2019. In-situ data from CTD, ARGO floats and XBT are assimilated into the model in combination with satellite altimetry data.</p><p>This reanalysis has been validated and assessed through comparison to in-situ and satellite observations as well as literature climatologies. The results show an overall improvement of the skill and a better representation of the main dynamics of the region compared to the previous, lower resolution (1/16<strong>°</strong>) reanalysis. Temperature and salinity RMSE is decreased by respectively 12% and 20%. The deeper biases in salinity of the previous version are corrected and the new reanalysis present a better representation of the deep convection in the Gulf of Lion. Climate signals show continuous increase of the temperature due to climate change but also in salinity.</p><p>The new reanalysis will allow the study of physical processes at multi-scales, from the large scale to the transient small mesoscale structures.</p>

scholarly journals A High Resolution Reanalysis for the Mediterranean Sea

2021 ◽  
Vol 9 ◽  
Author(s):  
Romain Escudier ◽  
Emanuela Clementi ◽  
Andrea Cipollone ◽  
Jenny Pistoia ◽  
Massimiliano Drudi ◽  
...  
Keyword(s):  
High Resolution ◽  
Mediterranean Sea ◽  
Sea Level ◽  
Large Scale ◽  
Mixed Layer Depth ◽  
Horizontal Resolution ◽  
Continuous Increase ◽  
The Past ◽  
The Mediterranean

In order to be able to forecast the weather and estimate future climate changes in the ocean, it is crucial to understand the past and the mechanisms responsible for the ocean variability. This is particularly true in a complex area such as the Mediterranean Sea with diverse dynamics like deep convection and overturning circulation. To this end, effective tools are ocean reanalyses or reconstructions of the past ocean state. Here we present a new physical reanalysis of the Mediterranean Sea at high resolution, developed in the Copernicus Marine Environment Monitoring Service (CMEMS) framework. The hydrodynamic model is based on the Nucleus for European Modelling of the Ocean (NEMO) combined with a variational data assimilation scheme (OceanVar). The model has a horizontal resolution of 1/24° and 141 unevenly distributed vertical z* levels. It provides daily and monthly temperature, salinity, current, sea level and mixed layer depth as well as hourly fields for surface velocities and sea level. ECMWF ERA-5 atmospheric fields force the model and daily boundary conditions in the Atlantic are taken from a global reanalysis. The reanalysis covers the 33 years from 1987 to 2019. Initialized from SeaDataNet climatology in January 1985, it reaches a nominal state after a 2-years spin-up. In-situ data from CTD, ARGO floats and XBT are assimilated into the model in combination with satellite altimetry observations. This reanalysis has been validated and assessed through comparison to in-situ and satellite observations as well as literature climatologies. The results show an overall improvement of the comparison with observations and a better representation of the main dynamics of the region compared to a previous, lower resolution (1/16°), reanalysis. Temperature and salinity RMSD are decreased by respectively 14 and 18%. The salinity biases at depth of the previous version are corrected. Climate signals show continuous increase of the temperature and salinity, confirming estimates from observations and other reanalysis. The new reanalysis will allow the study of physical processes at multi-scales, from the large scale to the transient small mesoscale structures and the selection of climate indicators for the basin.

scholarly journals Recent Large Scale Environmental Changes in the Mediterranean Sea and Their Potential Impacts on Posidonia Oceanica

2019 ◽  
Vol 11 (2) ◽  
pp. 110 ◽  
Author(s):  
Malgorzata Stramska ◽  
Paulina Aniskiewicz
Keyword(s):  
Mediterranean Sea ◽  
Environmental Conditions ◽  
Environmental Changes ◽  
Posidonia Oceanica ◽  
Light Limitation ◽  
Spatial And Temporal Variability ◽  
The South ◽  
Depth Limit ◽  
South Eastern ◽  
The Mediterranean

Climate related changes can have significant effects on Posidonia oceanica, an endemic seagrass species of the Mediterranean Sea (MEDIT). This seagrass is very important for many aspects of functioning of the sea but there is an increasing number of reports about the ongoing loss of its biomass and area coverage. We analysed multiyear data of the sea surface temperature (SST), sea level anomalies, ocean colour MODIS-A and ERA-Interim reanalysis. The results provide a description of current environmental conditions in the MEDIT and their spatial and temporal variability, including long-term trends. We defined regions where the extent of the P. oceanica meadows may be limited by specific environmental conditions. Light limitation is more severe near the northern and western coasts of the MEDIT, where the vertical diffuse attenuation coefficient is large. In the zone extending from the Gulf of Lion towards the south, significant wave heights reach large values. Wave action may destroy the plants and as a result the shallow water depth limit of P. oceanica meadows is most likely deeper here than in other regions. The highest SST values are documented in the south-eastern part of the Mediterranean Sea. In this area P. oceanica meadows are more endangered by the climate warming than in other regions where SSTs are lower. The absence of P. oceanica meadows in the south-eastern edge of the Mediterranean Sea can be attributed to high temperatures. Our conclusions are partly confirmed by the information about P. oceanica from the literature but more monitoring efforts are needed to fully describe current extent of the meadows and their shifts. Results presented in this paper can help with designing special programs to confirm the role of environmental conditions on the spatial distribution of P. oceanica and their future trends in the Mediterranean Sea.

scholarly journals In-situ visualization library for Yin-Yang grid simulations

2021 ◽  
Vol 73 (1) ◽  
Author(s):  
Nobuaki Ohno ◽  
Akira Kageyama
Keyword(s):  
Computer Simulations ◽  
Large Scale ◽  
Visualization Method ◽  
In Situ Visualization ◽  
Yin Yang ◽  
Post Hoc ◽  
Selection Of

AbstractThe visualization of computer simulations is currently undergoing a transition from post-hoc to in-situ visualization in which visualization processes are applied, while the simulation is running. The selection of an appropriate method or tool is essential to efficiently perform in-situ visualization in parallelized large-scale computer simulations that run on supercomputers. Although some generic in-situ visualization libraries are available, they are overengineered for certain geophysical simulations. In this study, we focus on spherical simulations using the Yin-Yang grid. Computer simulations that use the Yin-Yang grid are gaining popularity in geophysics. We propose an in-situ visualization method dedicated to the Yin-Yang grid simulations and demonstrate its effectiveness through sample simulations.

scholarly journals The SOFG Anatomy Entry List (SAEL): An Annotation Tool for Functional Genomics Data

2004 ◽  
Vol 5 (6-7) ◽  
pp. 521-527 ◽  
Author(s):  
Helen Parkinson ◽  
Stuart Aitken ◽  
Richard A. Baldock ◽  
Jonathan B. L. Bard ◽  
Albert Burger ◽  
...  
Keyword(s):  
Gene Expression ◽  
Functional Genomics ◽  
Large Scale ◽  
Controlled Vocabulary ◽  
First Pass ◽  
Relevant Term ◽  
High Level ◽  
Supporting Functional ◽  
Selection Of

A great deal of data in functional genomics studies needs to be annotated with low-resolution anatomical terms. For example, gene expression assays based on manually dissected samples (microarray, SAGE, etc.) need high-level anatomical terms to describe sample origin. First-pass annotation in high-throughput assays (e.g. large-scalein situgene expression screens or phenotype screens) and bibliographic applications, such as selection of keywords, would also benefit from a minimum set of standard anatomical terms. Although only simple terms are required, the researcher faces serious practical problems of inconsistency and confusion, given the different aims and the range of complexity of existing anatomy ontologies. A Standards and Ontologies for Functional Genomics (SOFG) group therefore initiated discussions between several of the major anatomical ontologies for higher vertebrates. As we report here, one result of these discussions is a simple, accessible, controlled vocabulary of gross anatomical terms, the SOFG Anatomy Entry List (SAEL). The SAEL is available from http://www.sofg.org and is intended as a resource for biologists, curators, bioinformaticians and developers of software supporting functional genomics. It can be used directly for annotation in the contexts described above. Importantly, each term is linked to the corresponding term in each of the major anatomy ontologies. Where the simple list does not provide enough detail or sophistication, therefore, the researcher can use the SAEL to choose the appropriate ontology and move directly to the relevant term as an entry point. The SAEL links will also be used to support computational access to the respective ontologies.

Sign in / Sign up

Export Citation Format

Share Document