The Method for Evaluating Cross-Shore Migration of Sand Bar under the Influence of Nonlinear Waves Transformation

Sand bar migration on the gently sloping sandy bottom in the coastal zone as a result of nonlinear wave transformation and corresponding sediment transport is discussed. Wave transformation on the intermediate depth causes periodic exchange of energy in space between the first and the second wave harmonics, accompanied by changes in the wave profile asymmetry. This leads to the occurrence of periodical fluctuations in the wave-induced sediment transport. It is shown that the position of the second nonlinear wave harmonic maximum determines location of the divergence point of sediment transport on the inclined bottom profile, where it changes direction from the onshore to the offshore. Such sediment transport pattern leads to formation of an underwater sand bar. A method is proposed to predict the position of the bar on an underwater slope after a storm based on calculation of the position of the maximum amplitude of the second nonlinear harmonic. The method is validated on the base of field measurements and ERA 5 reanalysis wave data.

Understanding “Alexandrian” extinctions using genomic DNA from fluid-preserved museum specimens of Desmognathus salamanders

Species that went extinct prior to the genomic era are typically out-of-reach for modern phylogenetic studies. We refer to these as “Alexandrian” extinctions, after the lost library of the ancient world. This is particularly limiting for conservation studies, as genetic data for such taxa may be key to understand extinction threats and risks, the causes of declines, and inform management of related, extant populations. Fortunately, continual advances in biochemistry and DNA sequencing offer increasing ability to recover DNA from historical museum specimens, including fluid-preserved natural history collections. Here, we report on success in recovering nuclear and mitochondrial data from the apparently-extinct subspecies Desmognathus fuscus carri (Neill 1951), a plethodontid salamander from spring runs in central Florida. The two specimens are 50 years old and were likely preserved in unbuffered formalin, but application of a recently derived extraction procedure yielded usable DNA and partially successful Anchored Hybrid Enrichment sequencing. These data suggest that the populations of D. f. carri from peninsular Florida are conspecific with the D. auriculatus A lineage as suggested by previous authors, but likely represented an ecogeographically distinct genetic segment that has now been lost. Genetic data from this Alexandrian extinction thus confirm the geographic extent of population declines and extirpations as well as their ecological context, suggesting a possibly disproportionate loss from sandy-bottom clearwater streams compared to blackwater swamps. Success of these methods bodes well for large-scale application to fluid-preserved natural history specimens from relevant historical populations, but the possibility of significant DNA damage and related sequencing errors in additional hurdle to overcome.

Spatiotemporal patterns of phenology of the alien Phaeophyceae Sargassum muticum on the Atlantic coast of Morocco

The present study focused on the dynamics of the phenology and life cycle of the Phaeophyceae invader Sargassum muticum at three sites on the Atlantic coast of Morocco over a period of two years (2013 and 2014). The results showed that S. muticum has two distinct growth phases; one with slower growth in winter followed by one with faster growth in spring-early summer, when the species exhibited high elongation and branching activities with thalli length ranging from 1 to more than 5 m depending on the study site. The site S1, with a rocky substratum covered by submerged sands, promotes thalli elongation, with maximum lengths of 643.33 11.10 cm recorded in July. At the rocky sites (S2 and S3), the maximum length of the seaweed depends on the pools’ depth. Although the elongation of thalli is enhanced by the water body depth, the settlements’ density (5-48 ind. m–2) seems to be mainly related to the nature of the substrate. The maturity index progressively increases from spring to early summer, when it reaches the highest values. S. muticum seems to be more abundant and more easily acclimated in shallow rockpools (sufficiently lighted and semi-exposed to wave action at the mid and lower tidal levels) than in protected sandy bottom sites with low hydrodynamic forces.

The Importance of Home Cleaning: Sediment Transport by Alpheid Shrimps Provides a Competitive Advantage to Their Host Anemones

Bartholomea annulata is a facultative host of the A. armatus species complex. In the Mexican Caribbean it is commonly found in cracks and crevices located where the vertical walls meet the sandy bottom or on large coral patches away from the sand. To protect themselves from predators, anemones often contract their hydraulic body into a cavernous den and extend the stinging tentacles toward the entrance. The high sediment dynamics of the region, however, result in a permanent risk of animal shelters to be obstructed by sand. By both analysing field data and conducting laboratory experiments with artificial shelters, the present study explored the den cleaning behaviour widely extended amongst alpheid shrimp, and its role in the alpheid-anemone symbiotic interaction. Videorecordings showed that den cleaning was composed of three main behaviours: digging, tossing and tamping. It commenced as soon as 7.2 ± 10.5 min after anemones were recognised by alpheids, and behaviours were displayed systematically amongst all 12 replicates. Despite being completely burrowed in sand, Alpheus spp. were capable of finding the anemone and liberating the entrance of the artificial shelters in less than 2.5 h. In addition, manipulative experiments showed that anemones confronted with shelters that were obstructed with sediment had a 25% probability of fully retracting when Alpheus spp. were absent, compared to a 75% probability when shrimps had cleaned the shelter’s entry and internal passage. The analysis of field data indicated that the presence of alpheid shrimps as symbionts of B. annulata was 30% higher amongst anemones in close contact with sandy bottoms than when inhabiting crevices on the top or lateral walls of hard substrates, away from the sediment. Overall, our study concludes that den cleaning constitutes a quick and effective mechanism to assure the anemone’s full retraction into their den, and by keeping the sediment away, alpheids provide the necessary conditions that serve both the anemone’s and the shrimp’s higher chances of acquiring maximum protection from predators. This advantageous exchange in protection partially explains why alpheids are more frequently present in B. annulata in interface microhabitats where the benefit of the interaction is maximised.

Conservation Implications of Sabellaria spinulosa Reef Patches in a Dynamic Sandy-Bottom Environment

Biogenic reefs form biodiversity hotspots and are key components of marine ecosystems, making them priority habitats for nature conservation. However, the conservation status of biogenic reefs generally depends on their size and stability. Dynamic, patchy reefs may therefore be excluded from protection. Here, we studied epibenthos and epifauna density, richness, and community composition of patchy, dynamic Sabellaria spinulosa (ross worm) reefs in the North Sea. This study was conducted by comparing boxcore (endobenthos) and video transect (epifauna) data from two research campaigns in 2017 and 2019 to the Brown Bank area on the Dutch Continental Shelf, where S. spinulosa reefs were first discovered in 2017. The Brown Bank area is characterized by dynamic, migratory bedforms at multiple scales which potentially affect biogenic reef stability. We showed that S. spinulosa habitats had a patchy distribution and alternated with habitats comprised of plain sand. Average S. spinulosa habitat patch size was 5.57 ± 0.99 m and 3.94 ± 0.22 m in 2017 and 2019, respectively (mean ± SE), which especially in 2019 closely resembled the small-scale megaripple bedforms. Contrary to the endobenthos communities that were unaffected by S. spinulosa, epifauna density and species richness were at least two times higher in S. spinulosa habitats compared to sandy habitats, resulting in different community compositions between the two habitat types. We showed that S. spinulosa persisted in the area for almost 2 years. Although the stability of individual patches remained unclear, we demonstrated that even patchy biogenic reefs may promote density and local biodiversity of mobile, epibenthic species, very likely as a result of increased habitat heterogeneity provided by reef habitat patches. This indicates that patchy biogenic reefs that occur in dynamic environments may also have high ecological value and their conservation status should be (re)considered to ensure their protection.

Fossil gastropods Campanile lachesis Bayan, 1870 from the upper Eocene of the Eastern Rhodopes (Bulgaria)

The subject of this study is the description of eight specimens of fossil gastropods Campanile lachesis Bayan, 1870, family Campanilidae, from the fund of the Regional Museum of History in Kardzhali. They were found in the area of the village of Gorna Krepost, Kardzhali Municipality, at the eastern foot of the Archeological Complex Perperikon, in the upper Eocene (Priabonian) limestone layers of the so-called Beli Plast Rhyodacite Complex. The paleoecological traits of the present fauna give ground to infer that this was a very shallow reefal environment with a rocky substrate sandy bottom, overgrown with algae, and the water was warm, with normal salinity.

First description of deep benthic habitats and communities of oceanic islands and seamounts of the Nazca Desventuradas Marine Park, Chile

Seamounts and oceanic islands of the Chilean Exclusive Economic Zone at the intersection of the Nazca and Salas y Gómez ridges lie within one of the least explored areas in the world. The sparse information available, mainly for seamounts outside Chilean jurisdiction and shallow-water fauna of the Desventuradas Islands, suggests that the area is a hotspot of endemism. This apparent uniqueness of the fauna motivated the creation of the large Nazca-Desventuradas Marine Park (NDMP, ~ 300,000 km2) around the small islands San Felix and San Ambrosio in 2015. We report for the first time a detailed description of benthic microhabitats (i.e., centimeter to meter scale), macrohabitats (i.e., meter to kilometer-scale) and associated megafauna within the NDMP. Descriptions were based on analysis of fauna collected by trawling and ROV video observations from ~ 50 to 370 m depth. Rocky, coarse sand and silty sediment bottom habitats were observed at island slopes. In contrast, rocky and coarse sandy bottom habitats with a predominance of rhodoliths, thanatocoenosis, and other biogenic components were observed at seamounts. Mobile fauna and predators dominated the oceanic islands and nearby seamounts, whereas seamounts farther from the islands were dominated by sessile and hemisessile fauna that were mainly suspension and deposit feeders. Based on the register of 118 taxonomic units, our results provide an expanded and updated baseline for the benthic biodiversity of NDMP habitats, which seemed pristine, without evidence of trawling or anthropogenic debris.

On the presence of the Endangered white skate Rostroraja alba in Sardinian waters

The white skate Rostroraja alba is assessed by the International Union for Conservation of Nature as Endangered globally and is now considered rare in the Mediterranean. This species has never been recorded in Sardinian seas (central western Mediterranean), but an empty eggcase was collected on a sandy bottom off the western Sardinia coasts during the MEDiterranean International Trawl Survey (MEDITS) program in 2019. A morphometric and morphological description of the Sardinian eggcase, after a comparison with measurements from other Mediterranean and Atlantic specimens, showed it to be clearly ascribable to Rostroraja alba.