Inverdale fecundity gene (FecXI) influences twin ovulation incidence in pubertal ewe lambs from Texel sires and Cheviot or Scottish Blackface dams

2005 ◽  
Vol 2005 ◽  
pp. 55-55 ◽  
Author(s):  
F. M. Alink ◽  
M. J. A. Mylne ◽  
R. G. Watt ◽  
P. Kenyon ◽  
M.J. Wood ◽  
...  
Keyword(s):  
Litter Size ◽  
Single Gene ◽  
Single Copy ◽  
Female Offspring ◽  
Gene Effects ◽  
Genetic Traits ◽  
Sheep Breeds ◽  
Ewe Lambs ◽  
Homozygous Genotype ◽  
Market Needs

A key to long-term sustainable enhancement of viable livestock production is the introduction of genetic traits that ensure that fertility and meat quality characteristics are compatible with farming environments and market needs. For example, the sheep industry could benefit if daughters of hill-breed ewes were of a crossbred genotype that enhances both carcass characteristics and fertility traits. Use of sires that confer better conformation is an option but does not significantly boost prolificacy. Introduction of the ‘Inverdale’ fecundity gene could change this. On a flock basis in the Romney breed, mean ovulation is increased by 1.0 and litter size by 0.6 in adult ewes carrying a single copy of this gene (designated as FecXI because it is on the X chromosome; Davis et al. 1992). Carrier males transmit it to all of their female offspring, these being heterozygous carriers of the gene unless it also is maternally inherited. In the latter instance, young would be infertile the homozygous genotype confers an undesirable ‘streak ovary’ phenotype. Although a number of sheep breeds world-wide exhibit significant ‘single gene’ effects on ovulation and litter size (Montgomery et al. 2001), Scottish hill sheep breeds show no evidence of this. Consequently, all ewe lambs generated by crossing these hill ewes with a ram carrying the Inverdale gene should be heterozygous. To ascertain whether such animals exhibit enhanced fecundity, an on-farm study investigated ovulation incidence in cyclic ewe lambs born to Cheviot or Scottish Blackface ewes that had been bred to Texel rams carrying a single copy of the ‘Inverdale’ gene.

scholarly journals Reproductive Biology of the Booroola Merino Sheep

1984 ◽  
Vol 37 (3) ◽  
pp. 163 ◽  
Author(s):  
BM Bindon
Keyword(s):  
Reproductive Biology ◽  
Litter Size ◽  
Single Gene ◽  
Ovulation Rate ◽  
Physiological Characteristics ◽  
Merino Sheep ◽  
Sheep Breeds ◽  
The World ◽  
Lamb Survival ◽  
Size At Birth

This paper reviews the genetic and physiological characteristics of the Booroola Merino, one of the four most prolific sheep breeds in the world, and which was acquired by CSIRO in 1958 from a commercial sheep property, 'Booroola', Cooma, N.S.W. The exceptional prolificacy of this genotypee. g. mean flock ovulation rate in 1982 of 4�2 (range 1-10) and mean litter size of 2� 5 (range 1-7)is largely attributable to a single gene (F) of uncertain origin which increases ovulation rate. Crosses of the Booroola with other Merinos produce progeny which have a 47-87% increase in ovulation rate, a 45-56% increase in litter size at birth, and a 1-33% reduction in lamb survival relative to control Merinos. This represents a 16-37% increase in the number of lambs weaned per ewe joined in favour of the Booroola crosses.

Genetic polymorphism in fecundity gene (FecG) among Indiansheep breeds Balangir, Shahabadi and Bonpala

2016 ◽  
Author(s):  
Jowel Debnath ◽  
Ran Vir Singh
Keyword(s):  
Litter Size ◽  
Transforming Growth Factor ◽  
Natural Habitat ◽  
Factor B ◽  
Sheep Breeds ◽  
Homozygous Genotype ◽  
Average Litter Size ◽  
Pcr Rflp ◽  
Selection Of ◽  
Gdf9 Gene

FecG (GDF9) is a member of the transforming growth factor-b (TGF- b) superfamily, have been shown to be essential for follicular growth and ovulation. Different mutations in FecG gene caused increased ovulation and infertility in sheep. The present study was designed for screening polymorphism of FecG gene in 250 selected ewes from different sheep flocks representing Balangir (100), Shahabadi (100) and Bonpala (50) by employing forced PCR-RFLP technique. Genomic DNA was extracted from the blood of Balangir, Shahabadi and Bonpala matured ewes with average litter size varying from 1.00± 0.00 to 1.14±0.02 at different parities. Digestion of FecG (GDF9) gene with DdeI restriction enzyme resulted into FecGHH homozygous genotype. In all three sheep breeds, genotypic frequencies of FecGHH were 100% and gene frequency of H allele was unity. This indicates that the FecG gene is fixed in the Balangir, Shahabadi and Bonpala population in the natural habitat. Litter size of Balangir and Bonpala sheep breeds were single but in Shahabadi sheep twin was recorded. In present study all the animals of three breeds were homozygous for FecG and there was no infertility observed in above mentioned breeds in field condition and organized farm, which is not in consonance with previous report. The observed effects could be caused by linkage disequilibrium with other nearby loci. The study revealed that FecG gene is not a reliable genetic marker for selection of high prolificacy in sheep.

scholarly journals Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Linda S. Forero-Quintero ◽  
William Raymond ◽  
Tetsuya Handa ◽  
Matthew N. Saxton ◽  
Tatsuya Morisaki ◽  
...  
Keyword(s):  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Single Molecule ◽  
Computational Models ◽  
Spatial Organization ◽  
Fluorescent Antibody ◽  
Single Gene ◽  
Single Copy ◽  
Living Cells ◽  
Live Cell

AbstractThe carboxyl-terminal domain of RNA polymerase II (RNAP2) is phosphorylated during transcription in eukaryotic cells. While residue-specific phosphorylation has been mapped with exquisite spatial resolution along the 1D genome in a population of fixed cells using immunoprecipitation-based assays, the timing, kinetics, and spatial organization of phosphorylation along a single-copy gene have not yet been measured in living cells. Here, we achieve this by combining multi-color, single-molecule microscopy with fluorescent antibody-based probes that specifically bind to different phosphorylated forms of endogenous RNAP2 in living cells. Applying this methodology to a single-copy HIV-1 reporter gene provides live-cell evidence for heterogeneity in the distribution of RNAP2 along the length of the gene as well as Serine 5 phosphorylated RNAP2 clusters that remain separated in both space and time from nascent mRNA synthesis. Computational models determine that 5 to 40 RNAP2 cluster around the promoter during a typical transcriptional burst, with most phosphorylated at Serine 5 within 6 seconds of arrival and roughly half escaping the promoter in ~1.5 minutes. Taken together, our data provide live-cell support for the notion of efficient transcription clusters that transiently form around promoters and contain high concentrations of RNAP2 phosphorylated at Serine 5.

scholarly journals Characterization of Aminoacyl-tRNA Synthetases in Chromerids

Genes ◽  
2019 ◽  
Vol 10 (8) ◽  
pp. 582 ◽  
Author(s):  
Sharaf ◽  
Gruber ◽  
Jiroutová ◽  
Oborník
Keyword(s):  
Single Gene ◽  
Single Copy ◽  
Duplicated Genes ◽  
Endosymbiotic Gene Transfer ◽  
Cellular Compartment ◽  
Trna Synthetases ◽  
Aminoacyl Trna Synthetases ◽  
Genes Encoding ◽  
Eukaryotic Origin

Aminoacyl-tRNA synthetases (AaRSs) are enzymes that catalyze the ligation of tRNAs to amino acids. There are AaRSs specific for each amino acid in the cell. Each cellular compartment in which translation takes place (the cytosol, mitochondria, and plastids in most cases), needs the full set of AaRSs; however, individual AaRSs can function in multiple compartments due to dual (or even multiple) targeting of nuclear-encoded proteins to various destinations in the cell. We searched the genomes of the chromerids, Chromera velia and Vitrella brassicaformis, for AaRS genes: 48 genes encoding AaRSs were identified in C. velia, while only 39 AaRS genes were found in V. brassicaformis. In the latter alga, ArgRS and GluRS were each encoded by a single gene occurring in a single copy; only PheRS was found in three genes, while the remaining AaRSs were encoded by two genes. In contrast, there were nine cases for which C. velia contained three genes of a given AaRS (45% of the AaRSs), all of them representing duplicated genes, except AsnRS and PheRS, which are more likely pseudoparalogs (acquired via horizontal or endosymbiotic gene transfer). Targeting predictions indicated that AaRSs are not (or not exclusively), in most cases, used in the cellular compartment from which their gene originates. The molecular phylogenies of the AaRSs are variable between the specific types, and similar between the two investigated chromerids. While genes with eukaryotic origin are more frequently retained, there is no clear pattern of orthologous pairs between C. velia and V. brassicaformis.

scholarly journals Genomic Characterization and Curation of UCEs Improves Species Tree Reconstruction

2020 ◽  
Author(s):  
Matthew H Van Dam ◽  
James B Henderson ◽  
Lauren Esposito ◽  
Michelle Trautwein
Keyword(s):  
Marine Invertebrates ◽  
Phylogenetic Analyses ◽  
Single Gene ◽  
Gene Tree ◽  
Single Copy ◽  
Species Tree ◽  
Bootstrap Support ◽  
Gene Trees ◽  
Species Trees ◽  
Tree Reconstruction

Abstract Ultraconserved genomic elements (UCEs) are generally treated as independent loci in phylogenetic analyses. The identification pipeline for UCE probes does not require prior knowledge of genetic identity, only selecting loci that are highly conserved, single copy, without repeats, and of a particular length. Here, we characterized UCEs from 11 phylogenomic studies across the animal tree of life, from birds to marine invertebrates. We found that within vertebrate lineages, UCEs are mostly intronic and intergenic, while in invertebrates, the majority are in exons. We then curated four different sets of UCE markers by genomic category from five different studies including: birds, mammals, fish, Hymenoptera (ants, wasps, and bees), and Coleoptera (beetles). Of genes captured by UCEs, we find that many are represented by two or more UCEs, corresponding to nonoverlapping segments of a single gene. We considered these UCEs to be nonindependent, merged all UCEs that belonged to a particular gene, constructed gene and species trees, and then evaluated the subsequent effect of merging cogenic UCEs on gene and species tree reconstruction. Average bootstrap support for merged UCE gene trees was significantly improved across all data sets apparently driven by the increase in loci length. Additionally, we conducted simulations and found that gene trees generated from merged UCEs were more accurate than those generated by unmerged UCEs. As loci length improves gene tree accuracy, this modest degree of UCE characterization and curation impacts downstream analyses and demonstrates the advantages of incorporating basic genomic characterizations into phylogenomic analyses. [Anchored hybrid enrichment; ants; ASTRAL; bait capture; carangimorph; Coleoptera; conserved nonexonic elements; exon capture; gene tree; Hymenoptera; mammal; phylogenomic markers; songbird; species tree; ultraconserved elements; weevils.]

scholarly journals Inheritance of resistance to Cotton leaf curl virus in cotton (Gossypium hirsutum L.)

2008 ◽  
Vol 43 (No. 1) ◽  
pp. 5-9 ◽  
Author(s):  
I. Khan A ◽  
M. Hussain ◽  
S. Rauf ◽  
M. Khan T
Keyword(s):  
Single Gene ◽  
Cotton Leaf ◽  
Breeding Method ◽  
Narrow Sense Heritability ◽  
Additive Variance ◽  
Gene Effects ◽  
Genetic Components ◽  
Cotton Leaf Curl Virus ◽  
Leaf Curl Virus ◽  
Leaf Curl

Resistance to <i>Cotton leaf curl virus</i> (CLCuV) in three cultivars of cotton was investigated in crosses with a susceptible cultivar using generation mean analysis. No single gene of major effect controlled resistance to Cotton leaf curl virus in the three crosses. The mean number of effective factors controlling resistance in cross LRA-5166 &times; S-12 was estimated to be at least five. Estimates of broad and narrow sense heritability indicate that effects by the environment were larger than those of genetic components. Epistasis was significant in two crosses. Additive gene effects contributed more to resistance than to susceptibility in contrast with dominance gene effect. Reciprocal differences were detected in the cross with LRA-5166. Estimates of genetic gain ranged form low to moderate. Thus, a breeding method that makes use of additive variance should be used because much of the variances for resistance are additive, whereas dominance effects, at least in these crosses, tended to contribute to susceptibility.

scholarly journals Association of Polymorphisms in Candidate Genes with the Litter Size in Two Sheep Breeds

Animals ◽  
2019 ◽  
Vol 9 (11) ◽  
pp. 958 ◽  
Author(s):  
Yuan ◽  
Zhang ◽  
Li ◽  
Wang ◽  
Li ◽  
...  
Keyword(s):  
Candidate Genes ◽  
Genetic Markers ◽  
Litter Size ◽  
Nucleotide Polymorphisms ◽  
Female Reproduction ◽  
Dna Pooling ◽  
High Fecundity ◽  
Sheep Breeds ◽  
Hu Sheep ◽  
Six Genes

Hu sheep and Small-tailed Han sheep are the most widely raised and most famous maternal sheep breeds in China, which are known for precocious puberty, perennial oestrus and high fecundity (1–6 lambs each parity). Therefore, it is crucial to increase litter size of these two breeds for intensive sheep industry. The objective of this study was to identify potential genetic markers linked with sheep litter size located at ten genes. This study collected blood sample of 537 Hu sheep and 420 Small-tailed Han sheep with litter size of first parity. The average litter sizes in Hu sheep and Small-tailed Han sheep were 2.21 and 1.93. DNA-pooling sequencing method was used for detecting the potential single nucleotide polymorphisms (SNPs) in ten genes related to follicle development and female reproduction. SNPscan® was used for individually genotyping. As a result, a total of 78 putative SNPs in nine out of ten candidate genes (except NOG) were identified. In total, 50 SNPs were successfully genotyped in Hu sheep and Small-tailed Han sheep. After quality control, a total of 42 SNPs in Hu sheep and 44 SNPs in Small-tailed Han sheep were finally used for further analysis. Association analysis revealed that nine SNPs within six genes (KIT: g.70199073A>G, KITLG: g.124520653G>C, ADAMTS1: g.127753565T>C, ADAMTS1: g.127754640G>T, NCOA1: g.31928165C>T, NCOA1: g.32140565G>A, LIFR: g.35862868C>T, LIFR: g.35862947G>T and NGF: g.91795933T>C) were significantly associated with litter size in Hu sheep or Small-tailed Han sheep. A combined haplotypes analysis of the two loci (LIFR: g.35862868C>T and LIFR: g.35862947G>T) revealed that H2H3 (CTTT) combined haplotypes had the largest litter size than the rest combined haplotypes and more than those with either mutation alone in Small-tailed Han sheep. Taken together, our study suggests that nine significant SNPs in six genes can be served as useful genetic markers for MAS in sheep.

Single female offspring born to primiparous ewe-lambs are lighter than those born to adult multiparous ewes but their reproduction and milk production are unaffected

2012 ◽  
Vol 52 (7) ◽  
pp. 552 ◽  
Author(s):  
M. F. P. Loureiro ◽  
S. J. Pain ◽  
P. R. Kenyon ◽  
S. W. Peterson ◽  
H. T. Blair
Keyword(s):  
Milk Production ◽  
Reproductive Performance ◽  
Crude Protein ◽  
Female Offspring ◽  
Productive Performance ◽  
Single Female ◽  
Ewe Lambs ◽  
Ewe Lamb ◽  
Generation Offspring

Little is known about the long-term impacts of selecting progeny born to ewe-lambs (EL) as replacements. This study investigated whether being born to a ewe-lamb affected the liveweight, milk production and reproductive performance of the offspring to 3 years of age in comparison with those born to adult multiparous ewes. Twenty-seven and 28 single-born Romney ewe progeny (G1) were born to either EL or to adult ewes (AE), respectively. Offspring born to ewe-lambs (ELG1) were lighter (P < 0.001) at birth and up to 12 months of age compared with offspring born to adult ewes (AEG1). Reproductive performance of AEG1 and ELG1 did not differ in regards to puberty attainment, pregnancy rate and number of fetuses. First lactation milk production, fat, crude protein, total protein, casein, lactose and total solids yield did not differ (P > 0.05). The second generation offspring born to ELG1 and AEG1 did not differ in birthweight in the first parity, but it did differ in the second parity and those lambs born to ELG1 were heavier from birth to weaning compared with those lambs born to AEG1. Combined, these results indicate, in the animals used in our study that productive performance of ewes born to EL does not differ to 3 years of age to that of ewes born to AE.

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