180 Effects of Forage Mixtures on Rumen Fermentation Parameters as Assessed by Continuous Culture

2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 97-97
Author(s):  
Miriam A Snider ◽  
Jacqueline M Johnson ◽  
Sara E Ziegler ◽  
Heather M Darby ◽  
Sabrina L Greenwood
Keyword(s):  
Continuous Culture ◽  
Latin Square ◽  
Red Clover ◽  
Sample Collection ◽  
Fermentation Parameters ◽  
Nutritional Benefits ◽  
The Impact ◽  
Forage Mixtures ◽  
Methane Concentrations

Abstract The impact of using diverse forage mixtures on rumen performance is poorly characterized. The objective of this study was to evaluate the impact of feeding diverse pastures on rumen performance using in vitro continuous culture fermenters. Treatments were assessed using a 4 x 4 Latin square design. Each 10-d period included 7-d of adaption followed by 3-d of sample collection. Dietary treatments (DM basis) included 1) 50% orchardgrass + 50% alfalfa (OG-ALF); 2) 50% OG-ALF + 50% red clover (RC); 3) 50% OG-ALF + 50% pearl millet (MIL); and 4) 50% OG-ALF + 50% sorghum x sudangrass (SUD). Forage diets (131 g DM/ fermenter/ d) were divided into 4 portions/d (33%, 0600 h; 17%, 0720 h; 33%,1800 h; 17%, 1920 h). Fermenter pH measurements were collected every min for the entire experiment. Methane concentrations were measured using a gas probe and recorded twice daily (0530 h,1730 h) in triplicate on d 7, 8, 9, and 10. Daily total effluent samples were collected on d 8, 9, and 10 for VFA analysis. Results were analyzed using PROC MIXED of SAS. There were no differences in total VFA concentrations (P = 0.08), molar proportions (P = 0.22), or individual VFA ratios (P > 0.05) as a result of treatment. Fermenter pH did not differ between fermenters as a result of treatment (P > 0.05). Fermenters receiving OG-ALF had the greatest methane concentration (50.8 mg/dL), which was higher (P < 0.05) than methane concentrations in fermenters receiving MIL (6.2 mg/dL), SUD (6.9 mg/dL), or RC (21.2 mg/dL). Methane concentrations from the MIL, SUD and RC treatments did not differ (P > 0.05). This indicates that binary forage mixtures may have lower nutritional value compared with diverse mixtures, and this diversification could provide nutritional benefits.

Dynamic simulations of microbial communities under perturbations: opportunities for microbiome engineering

2020 ◽  
Author(s):  
Beatriz García-Jiménez ◽  
Jorge Carrasco ◽  
Joaquín Medina ◽  
Mark D Wilkinson
Keyword(s):  
Microbial Communities ◽  
Biological Knowledge ◽  
Sample Collection ◽  
Biomedical Knowledge ◽  
Microbial Composition ◽  
Dynamic Simulations ◽  
Soil Microbial ◽  
Types Of Information ◽  
The Impact

Abstract Background : There are few large longitudinal microbiome studies, and fewer that include controlled, well-annotated perturbations between sampling-points. Thus, there are few opportunities to employ data-driven computational analyses of perturbed microbial communities over time. Results : Our novel computational system simulates the dynamics of microbial communities under perturbations using genome-scale metabolic models (GEMs). Perturbations include modifications to a) the nutrients available in the medium, allowing modelling of prebiotics; and/or b) the microorganisms present in the community to model, for example, probiotics or pathogen infection. These simulations generate the quantity and types of information required by MDPbiome, an AI system which builds predictive models suggesting the perturbation(s) required to engineer microbial communities to a desired state. We call this novel combination of technologies "MDPbiomeGEM"'. We demonstrate, in a Crohn’s disease microbiome, that MDPbiomeGEM correctly models the influence of both prebiotic fiber and a probiotic, resulting in a recommendation to consume inulin to recover from dysbiosis, consistent with prior biomedical knowledge. When used to model the soil microbiome's ability to degrade the herbicide Atrazine, differing recommendations arise depending on the highly variable state of the initial soil microbial composition, highlighting the relevance of both phosphate and microbes (i.e. Halobacillus sp. and H.stevensii ) in a directed microbiome engineering strategy, consistent with previously published observations. Conclusions : MDPbiomeGEM generates large volumes of longitudinal data of complex microbial communities experiencing perturbations. Machine learning on these data reveal patterns consistent with existing biological knowledge, supporting the validity of the approach. MDPbiomeGEM could save research resources by optimizing sample collection in metagenomics studies through identification of "informative" scenarios/time-points, or by predicting optimal in-vitro culture formulations for generating performant synthetic microbial communities. Finally, MDPbiomeGEM outputs include detailed information about the metabolic state of the community, which can be used to further interpret the impact of perturbations, and potentially could be used to predict novel metabolic biomarkers of a microbiome's state.

scholarly journals Trans-Activator Binding Site Context in RCNMV Modulates Subgenomic mRNA Transcription

Viruses ◽  
2021 ◽  
Vol 13 (11) ◽  
pp. 2252
Author(s):  
Jennifer S. H. Im ◽  
Laura R. Newburn ◽  
Gregory Kent ◽  
K. Andrew White
Keyword(s):  
Binding Site ◽  
Rna Structure ◽  
Red Clover ◽  
Mrna Levels ◽  
Mrna Transcription ◽  
Base Pairing ◽  
Independent Manner ◽  
The Impact

Many positive-sense RNA viruses transcribe subgenomic (sg) mRNAs during infections that template the translation of a subset of viral proteins. Red clover necrotic mosaic virus (RCNMV) expresses its capsid protein through the transcription of a sg mRNA from RNA1 genome segment. This transcription event is activated by an RNA structure formed by base pairing between a trans-activator (TA) in RNA2 and a trans-activator binding site (TABS) in RNA1. In this study, the impact of the structural context of the TABS in RNA1 on the TA–TABS interaction and sg mRNA transcription was investigated using in vitro and in vivo approaches. The results (i) generated RNA secondary structure models for the TA and TABS, (ii) revealed that the TABS is partially base paired with proximal upstream sequences, which limits TA access, (iii) demonstrated that the aforementioned intra-RNA1 base pairing involving the TABS modulates the TA–TABS interaction in vitro and sg mRNA levels during infections, and (iv) revealed that the TABS in RNA1 can be modified to mediate sg mRNA transcription in a TA-independent manner. These findings advance our understanding of transcriptional regulation in RCNMV and provide novel insights into the origin of the TA–TABS interaction.

scholarly journals Some factors associated with the difference in nutritive value of artificially dried red clover and perennial ryegrass for sheep

1979 ◽  
Vol 42 (1) ◽  
pp. 139-147 ◽  
Author(s):  
G. Moseley ◽  
J. R. Jones
Keyword(s):  
Perennial Ryegrass ◽  
Nutritive Value ◽  
Latin Square ◽  
Red Clover ◽  
Water Soluble ◽  
Soluble Carbohydrates ◽  
In Vitro Digestibility ◽  
Voluntary Intake ◽  
The Difference

1. Three sheep fitted with duodenal re-entrant cannulas and three with large rumen fistulas were given red clover, perennial ryegrass and a 2:1 (w/w) mixture of grass and clover in two Latin square arrangements. Measurements were made of voluntary intake, digestibility, flow of nutrients into the duodenum and the flow of Cr-EDTA marker through the reticulo-rumen.2. Organic matter (OM) digestibility was similar for the three feeds but the voluntary intake decreased in the order mixture > red clover > perennial ryegrass. There was an increase in the rate of marker flow from the rumen and a decrease in retention time of the same order. Rumen volume did not change significantly.3. There was a reduction in the mean particle size of rumen contents in the order perennial ryegrass > clover > mixture. The in vitro digestibility of particles decreased with size; the reduction being more rapid for clover than perennial ryegrass.4. The proportion of ingested digestible OM appearing at the duodenum increased from 18.4% to 26.7% to 30.0% for perennial ryegrass, clover and the mixture respectively.5. A higher proportion of digestible cellulose and hemicellulose disappeared over the stomach for the perennial ryegrass feed compared to the clover and the mixture but over 96% of water soluble carbohydrates and starch disappeared over the stomach for all three feeds.6. The apparent digestibility of nitrogen was similar for all three feeds but the proportion of undigested feed N appearing at the duodenum was calculated to be greater by a factor of 1.71 and 2.52 for clover and mixture feeds compared to grass.7. It was concluded that the higher nutritive value of red clover compared to perennial ryegrass was due to an increased rate of flow of nutrients througth the reticulo-rumen and an increase in the proportion of digestible OM digested post ruminally.

scholarly journals Effects of Adding Pre-Fermented Fluid Prepared from Red Clover or Lucerne on Fermentation Quality and in Vitro Digestibility of Red Clover and Lucerne Silages

Agriculture ◽  
2021 ◽  
Vol 11 (5) ◽  
pp. 454
Author(s):  
Lin Sun ◽  
Yun Jiang ◽  
Qinyin Ling ◽  
Na Na ◽  
Haiwen Xu ◽  
...  
Keyword(s):  
Lactic Acid ◽  
Dry Matter ◽  
Red Clover ◽  
Ammonia Nitrogen ◽  
In Vitro Digestibility ◽  
Fermentation Quality ◽  
Fermentation Parameters ◽  
Positive Effect

This study examined the effects of chopping or chopping + blender maceration of red clover or lucerne on pre-fermented juice (PFJ) and determined the effects of PFJs on the quality of red clover silage or lucerne silage. The PFJs from chopping red clover (PFJ-RC) or lucerne (PFJ-LC) had a higher lactic acid bacteria (LAB) count than that from chopping + blender maceration (p < 0.05) and were used as additives. Compared with the Control of both silages, adding PFJ increased LAB, lactic acid (LA), and in vitro digestibility of dry matter (IVDMD) (p < 0.05), while pH, acetic acid (AA), and ammonia nitrogen/total nitrogen (NH3-N/TN) were decreased (p < 0.05). For red clover silages, the PFJ-RC treatment contained the greatest LAB and LA and the lowest pH and NH3-N/TN among treatments (p < 0.05); similar results were observed in PFJ-LC treatment for lucerne silages (p < 0.05). The IVDMD of both silages correlated negatively with pH, AA, and NH3-N/TN and positively with LA (p < 0.05). Overall, chopping alone was a better method for preparing PFJ. Adding PFJ at ensiling increased LA and decreased the pH, AA, and NH3-N/TN of both silages. Ensiling lucerne or red clover with PFJ from the ensiling material had a more positive effect on the fermentation parameters mentioned above. Satisfactory fermentation parameters detected in the present study contributed to improving the IVDMD of both silages.

scholarly journals Optimizing beef cattle performance using rumen-protected lysine supplementation in diets balanced for predicted amino acid and effective energy requirement

2017 ◽  
Author(s):  
◽  
Jacquelyn Prestegaard
Keyword(s):  
Beef Cattle ◽  
Continuous Culture ◽  
Soybean Meal ◽  
Dry Matter ◽  
Energy Requirement ◽  
Latin Square ◽  
Negative Control ◽  
Effective Energy ◽  
Dietary Treatments

The objectives of these experiments were to determine the bypass value of rumen-protected lysine and performance responses of beef cattle fed encapsulated lysine. During experiment 1 singe-flow continuous culture fermenters were fed a Lys-deficient control (CON), a Lys-sufficient diet supplemented with rumen-protected soybean meal (RPSBM; AminoPlus, Ag Processing Inc., Omaha, NE), or a Lys-sufficient diet containing a commercially available rumen-protected Lys product (RPLYS; USA Lysine, Kemin Industries Inc., Des Moines, IA). Results from continuous culture showed greater degradation of RPLYS than RPSBM and CON. During Experiment 2, an in vitro dry matter digestibility study showed DM degradation was 23 percent greater for pure USA Lysine than another encapsulated lysine product (AjiPro 2G, Ajinomoto Heartland, Inc., Omaha, NE). The next objective was to test if AjiPro would increase plasma Lys levels in vivo (and therefore indicate its successful ruminal bypass and small intestinal absorption). Experiment 3 involved a 3 x 3 Latin Square study conducted on cannulated crossbred steers fed a combination of rumen-protected soybean meal and two increased levels of the rumen-protected product, where it was fed to meet 100 percent (AJ100) and 150 percent (AJ150) absorbable AA to effective energy (EE) ratio. Plasma Lys levels were greater when steers were fed diets containing AjiPro in comparison to when they were fed a negative control (NEGCON) which did not contain the product and was deficient in absorbable Lys. From both the in vitro dry matter degradation experiment and the 3 x 3 Latin Square study, we determined AjiPro to be an effective source of bypass Lys, and consequently used it to conduct a growing through finishing study. During Experiment 4, we evaluated steer performance when fed diets balanced for predicted Lys requirement to EE ratio through its supplementation in several dietary treatments. Control treatments included a negative control (NEGCON) that was deficient in absorbable Lys and contained no rumen-protected products; and a positive control (POSCON) where rumen-protected soybean meal was used to balance absorbable AA to EE ratio. Three additional dietary treatments included similar amounts of rumen-protected soybean meal and incremental amounts of AjiPro formulated to provide 50 percent (AJ50), 100 percent (AJ100), or 150 percent (AJ150) of the absorbable Lys provided by POSCON. Starting on d 151 of the growth study, steers were weighed on 2 consecutive days every 14 d and assigned a final BW when no longer profitable (defined as when cost of gain exceeded value of gain). Steers remained profitable for greater days for NEGCON, POSCON and AJ100 than AJ150. Steers consuming POSCON had lesser ADG (kg/d) than all other treatments during the early finishing phase (d 75 to 112). However, steer ADG (kg/d) during late finishing (d 112 to 179) was greater for steers fed diets optimized for Lys requirement (POSCON and AJ100) than all other treatments. Between d 112 to 179, POSCON had greater G:F than all other treatments but did not differ from AJ100. When encapsulated Lys was under or over-supplemented, finishing steers became less profitable sooner. Feed efficiency increased with use of rumen-protected products during late finishing (d 112 to 179) in diets formulated to meet Lys requirement, but this did not impact overall steer performance from growing through finishing. A more accurate understanding of steer AA requirement and subsequent AA metabolism will allow more precise and effective use of rumenprotected products.

scholarly journals Effects of forage inclusion and cattle breed on apparent digestibility and ruminal pH of steers fed a whole shelled corn-based diet

2021 ◽  
Author(s):  
Pedro H V Carvalho ◽  
Mariana F Westphalen ◽  
Flavia A S Silva ◽  
Tara L Felix
Keyword(s):  
Repeated Measures ◽  
Dry Matter ◽  
Latin Square ◽  
Cattle Breed ◽  
Dry Matter Intake ◽  
Sample Collection ◽  
Ruminal Ph ◽  
Collection Data ◽  
The Impact ◽  
Plot Design

Abstract Objectives were to evaluate the effects of cattle breed, Holstein or Angus, and forage inclusion on total tract digestibility and ruminal pH in cattle fed a whole shelled corn (WSC) based diet. Six Holstein and 6 Angus steers, were assigned to a 2 × 3 factorial arrangement of treatments. Factors included breed, Holstein or Angus, and forage inclusion at 0, 8, or 16% forage (dry matter (DM) basis). Steers were fed in a replicated 3 × 3 Latin square, split-plot design. Each period consisted of 14 d diet adaptation followed by 7 d of sample collection. Data were analyzed using the MIXED procedures in SAS (v9.4 SAS Inst. Inc., Cary, NC). Repeated measures were used to analyze changes in ruminal pH over time. There was no interaction of breed × diet (P ≥ 0.19) on dry matter intake (DMI) or digestibility; however, Holstein steers had greater (P = 0.03) DMI than Angus steers. Despite the impact of breed on intake, there was no effect (P ≥ 0.33) of breed on diet digestibility. Digestibility of DM increased (linear; P &lt; 0.01) as forage was removed from the diet, but there were no differences (P ≥ 0.32) in NDF and starch digestibility. However, due to the change in diet, NDF intake digested on a grams per day basis increased (P ≤ 0.01) and starch intake digested (g/d) decreased (P = 0.01) as forage inclusion increased. There was a tendency for breed × diet interaction (P = 0.08) on ruminal pH. Holstein steers fed 8% or 16% forage had greater ruminal pH than Holstein steers fed 0% forage; but, ruminal pH of Angus steers was not altered by diet.

The Impact of Undetected In Vitro Hemolysis or Sample Contamination on Patient Care and Outcomes in Point-of-Care Testing: A Retrospective Study

2020 ◽  
Vol 5 (2) ◽  
pp. 332-341
Author(s):  
Matthew O’Hara ◽  
Elizabeth G Wheatley ◽  
Steven C Kazmierczak
Keyword(s):  
Retrospective Study ◽  
Patient Care ◽  
Patient Management ◽  
Point Of Care ◽  
Improve Patient Care ◽  
Sample Collection ◽  
Repeated Testing ◽  
Impact Patient Care ◽  
The Impact

Abstract Background Point-of-care (POC) testing is an integral diagnostic component in clinical settings like the emergency department (ED). However, most POC testing devices are unable to detect endogenous interferents such as hemolysis, which typically occurs during sample collection and handling and can falsely increase measured potassium (pseudohyperkalemia), a phenomenon we hypothesized may significantly impact patient care. Methods In this retrospective study, we evaluated 100 unique admissions to the Oregon Health & Science University ED, presenting with elevated potassium measured at the POC. To evaluate whether in vitro hemolysis had occurred, POC test results were compared to repeat testing of the original specimen, or other specimens tested within 90 minutes in the Core laboratory. Review of associated Electronic Health Records determined whether elevated potassium initially measured using the POC analyzer was real, or due to in vitro hemolysis or contamination, and whether pseudohyperkalemia impacted patient management or care. Results Of the 100 admissions with hyperkalemia measured using a POC analyzer, 40% were found to have pseudohyperkalemia due to hemolysis or contamination. Of these 40 patients, 6 experienced repeated testing, and an additional 5 were noted to have altered patient management, specifically due to pseudohyperkalemia. Conclusions This study demonstrates the incidence of in vitro hemolysis, which is unknown to the POC operator, is high in patients who show an elevated potassium as measured at the POC. Furthermore, in vitro hemolysis can significantly impact patient management, suggesting that minimizing the incidence of unrecognized hemolysis will benefit hospital efficiency, decrease waste, and improve patient care.

scholarly journals PSVI-12 Effects of polyphenols (mixed tannins) and saponin (Yucca schidigera), with or without a direct fed microbial (DFM) on in vitro rumen fermentation

2020 ◽  
Vol 98 (Supplement_4) ◽  
pp. 427-427
Author(s):  
S Richard Goodall ◽  
Arquimides Reyes ◽  
Octavio Guimaraes ◽  
Keith Belk ◽  
Terry E Engle
Keyword(s):  
Repeated Measures ◽  
Treatment Time ◽  
Rumen Fluid ◽  
Artificial Saliva ◽  
Block Design ◽  
Rubber Stopper ◽  
In Vitro Fermentation ◽  
Fermentation Parameters ◽  
The Impact

Abstract Rumen fluid from fistulated steers receiving a high concentrate diet was utilized to examine the impact of polyphenols and saponin with or without a direct fed microbial (DFM) on in vitro fermentation characteristics. Treatments consisted of: Control (no polyphenols, saponin or DFM); 2) Polyphenols (Mixed Tannins = 15 g/hd/d); 3) Saponin (Y. schidigera = 2 g/hd/d); 4) Polyphenols + DFM (DFM = 1E+7 Lactobacillus animalis + 1E+8 Propionibacteria acidilactici cfu/hd/d); and 5) Saponin + DFM. Rumen fluid was collected and combined in equal amounts from 3 rumen fistulated steers and mixed at a 1:1 ratio of artificial saliva to rumen fluid. Fermentation substrate consisted of 0.5 g of the high concentrate diet. Fermentation bottles were capped with an air-tight rubber stopper and incubated in a water bath for 12 and 18h (7 replicates/treatment/time point). After incubation, the total volume of gas produced was measured and a subsample analyzed for N, CH4 and CO2 concentrations. After gas sampling, pH, VFA concentrations, and DMD were determined. In vitro fermentation parameters were analyzed using a mixed effects model repeated measures analysis for a completely randomized block design. Acetic acid was decreased while valeric acid was increased (P &lt; 0.05) by the Saponin + DFM treatment vs. Control. At 12h DMD was greater in Saponin, Saponin + DFM and Polyphenols + DFM (P &lt; 0.001) treatments compared to Control or Polyphenols alone. Polyphenols produced greater amounts of CH4 /DMD than all other treatments (P &lt; 0.01). Microbial protein production and efficiency were greater (P &lt; 0.001), Saponin + DFM compared to other treatments. Other fermentation parameters measured were not impacted by treatments. Under the conditions of this experiment these data suggest combining DFM with Saponin or Polyphenols produces different ruminal effects from when they are fed alone.

EKSTRAK KULIT BUAH MANGGIS (Garcinia Mangostana L.) SEBAGAI OBAT ANTI DIARE

2019 ◽  
Vol 2 (1) ◽  
pp. 9-13
Author(s):  
Zaim Anshari ◽  
Chrismis Novalinda Ginting ◽  
Linda Chiuman ◽  
Yuliani Mardiati Lubis
Keyword(s):  
Blood Vessels ◽  
Smooth Muscles ◽  
Latin Square ◽  
Ethanol Extract ◽  
Garcinia Mangostana ◽  
Pharmacology And Toxicology ◽  
The Difference ◽  
North Sumatra ◽  
Papaverine Hydrochloride

This study aims to determine whether mangosteen rind extract (in the form of ethanol extract/EE) can be used as an anti-diarrhea drug after compared with other anti-diarrhea substances in three experimental groups. This research is an in vitro experimental study using adult male guinea pigs weighing 400-600 gr through the standard method of Magnus with the Latin square controlled experiment design. The study was conducted at the Pharmacology and Toxicology Laboratory of the Faculty of Pharmacy, University of North Sumatra. The results showed that the contraction of ileum in Ach with Atp + Ach compared the difference in contraction of ileum Ach with EE + Ach showed the difference in difference between the two contractions of the ileum was significant, the contraction of ileum in His with Dip + His compared indifference in contraction of ileum His with EE + His showed a difference indifference. the two ileal contractions are significant, the ileal contraction in the bar with Papa + Bar compared to the difference between the ileum bar contraction with EE + Bar shows no difference in the difference between the two ileum contractions. The conclusion is that the Mangosteen Skin Ethanol Extract works similarly to Papaverine Hydrochloride which is an antidiarrheal drug used to relax smooth muscles so that it can also make blood vessels dilate by relaxing smooth muscles in the walls of blood vessels.

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