scholarly journals Transcriptome Analysis of Arabidopsis Clubroots Indicate a Key Role for Cytokinins in Disease Development

2006 ◽  
Vol 19 (5) ◽  
pp. 480-494 ◽  
Author(s):  
Johannes Siemens ◽  
Ingo Keller ◽  
Johannes Sarx ◽  
Sabine Kunz ◽  
Astrid Schuller ◽  
...  
Keyword(s):  
Root Morphology ◽  
Plasmodiophora Brassicae ◽  
Cytokinin Oxidase ◽  
Disease Development ◽  
Root Cells ◽  
Clubroot Disease ◽  
The Family ◽  
Key Factor ◽  
Developmental Switch ◽  
Limited Change

The clubroot disease of the family Brassicaceae is caused by the obligate biotrophic protist Plasmodiophora brassicae. Infected roots undergo a developmental switch that results in the formation of aberrant roots (clubs). To investigate host gene expression during the development of the disease, we have used the Arabidopsis ATH1 genome array. Two timepoints were chosen, an early timepoint at which the pathogen has colonized the root but has induced only very limited change of host cell and root morphology and a later timepoint at which more than 60% of the host root cells were colonized and root morphology was drastically altered. At both timepoints, more than 1,000 genes were differentially expressed in infected versus control roots. These included genes associated with growth and cell cycle, sugar phosphate metabolism, and defense. The involvement of plant hormones in club development was further supported; genes involved in auxin homeostasis, such as nitrilases and members of the GH3 family, were upregulated, whereas genes involved in cytokinin homeostasis (cytokinin syn-thases and cytokinin oxidases/dehydrogenases) were already strongly downregulated at the early timepoint. Cytokinin oxidase/dehydrogenase overexpressing lines were disease resistant, clearly indicating the importance of cytokinin as a key factor in clubroot disease development.

scholarly journals Zakres żywicieli grzyba Plasmodiophora brassicae Wor. [The host range of the fungus Plasmodiophora brassicae Wor.]

2015 ◽  
Vol 26 (1) ◽  
pp. 53-61 ◽  
Author(s):  
B. Nowicki
Keyword(s):  
Host Range ◽  
Plant Species ◽  
Plasmodiophora Brassicae ◽  
Barbarea Vulgaris ◽  
Root Cells ◽  
The Family ◽  
Resting Spores ◽  
The Common

On the basis of clubs present on roots and resting-spores present in root cells it was shown that 132 plant species and varietes from the family <i>Cruciferae</i> out of 174 tested were susceptible to infection with <i>Plasmodiophora brassicae</i>. The susceptible plants included all the species cultivated in Poland and all the common weeds with the exception of <i>Barbarea vulgaris</i>.

scholarly journals Expression and Role of Biosynthetic, Transporter, Receptor, and Responsive Genes for Auxin Signaling during Clubroot Disease Development

2020 ◽  
Vol 21 (15) ◽  
pp. 5554
Author(s):  
Arif Hasan Khan Robin ◽  
Gopal Saha ◽  
Rawnak Laila ◽  
Jong-In Park ◽  
Hoy-Taek Kim ◽  
...  
Keyword(s):  
Plasmodiophora Brassicae ◽  
Fold Increase ◽  
Auxin Signaling ◽  
Post Inoculation ◽  
Disease Development ◽  
Secondary Phases ◽  
Auxin Receptor ◽  
Clubroot Disease ◽  
Root Tissues

Auxins play a pivotal role in clubroot development caused by the obligate biotroph Plasmodiophora brassicae. In this study, we investigated the pattern of expression of 23 genes related to auxin biosynthesis, reception, and transport in Chinese cabbage (Brassica rapa) after inoculation with P. brassicae. The predicted proteins identified, based on the 23 selected auxin-related genes, were from protein kinase, receptor kinase, auxin responsive, auxin efflux carrier, transcriptional regulator, and the auxin-repressed protein family. These proteins differed in amino acids residue, molecular weights, isoelectric points, chromosomal location, and subcellular localization. Leaf and root tissues showed dynamic and organ-specific variation in expression of auxin-related genes. The BrGH3.3 gene, involved in auxin signaling, exhibited 84.4-fold increase in expression in root tissues compared to leaf tissues as an average of all samples. This gene accounted for 4.8-, 2.6-, and 5.1-fold higher expression at 3, 14, and 28 days post inoculation (dpi) in the inoculated root tissues compared to mock-treated roots. BrNIT1, an auxin signaling gene, and BrPIN1, an auxin transporter, were remarkably induced during both cortex infection at 14 dpi and gall formation at 28 dpi. BrDCK1, an auxin receptor, was upregulated during cortex infection at 14 dpi. The BrLAX1 gene, associated with root hair development, was induced at 1 dpi in infected roots, indicating its importance in primary infection. More interestingly, a significantly higher expression of BrARP1, an auxin-repressed gene, at both the primary and secondary phases of infection indicated a dynamic response of the host plant towards its resistance against P. brassicae. The results of this study improve our current understanding of the role of auxin-related genes in clubroot disease development.

scholarly journals Expression and Role of Response Regulating, Biosynthetic and Degrading Genes for Cytokinin Signaling during Clubroot Disease Development

2020 ◽  
Vol 21 (11) ◽  
pp. 3896 ◽  
Author(s):  
Rawnak Laila ◽  
Arif Hasan Khan Robin ◽  
Jong-In Park ◽  
Gopal Saha ◽  
Hoy-Taek Kim ◽  
...  
Keyword(s):  
Chinese Cabbage ◽  
Plasmodiophora Brassicae ◽  
Expression Patterns ◽  
Vital Role ◽  
Disease Development ◽  
Cytokinin Signaling ◽  
Cytokinin Biosynthesis ◽  
Clubroot Disease ◽  
Leaf Tissues

The obligate biotroph Plasmodiophora brassicae causes clubroot disease in oilseeds and vegetables of the Brassicaceae family, and cytokinins play a vital role in clubroot formation. In this study, we examined the expression patterns of 17 cytokinin-related genes involved in the biosynthesis, signaling, and degradation in Chinese cabbage inoculated with the Korean pathotype group 4 isolate of P. brassicae, Seosan. This isolate produced the most severe clubroot symptoms in Chinese cabbage cultivar “Bullam-3-ho” compared to three other Korean geographical isolates investigated. BrIPT1, a cytokinin biosynthesis gene, was induced on Day 1 and Day 28 in infected root tissues and the upregulation of this biosynthetic gene coincided with the higher expression of the response regulators BrRR1, on both Days and BrRR6 on Day 1 and 3. BrRR3 and 4 genes were also induced during gall enlargement on Day 35 in leaf tissues. The BrRR4 gene, which positively interact with phytochrome B, was consistently induced in leaf tissues on Day 1, 3, and 14 in the inoculated plants. The cytokinin degrading gene BrCKX3-6 were induced on Day 14, before gall initiation. BrCKX2,3,6 were induced until Day 28 and their expression was downregulated on Day 35. This insight improves our current understanding of the role of cytokinin signaling genes in clubroot disease development.

RESISTANCE TO MILDEW OF SELECTION FAMILY OF RED CURRANT THE BELAYA POTAPENKO × № 1426-21-80

1970 ◽  
pp. 38-40
Author(s):  
O. O. Kalinina ◽  
O. D. Golyaeva ◽  
O. V. Panfilova ◽  
А. V. Pikunova
Keyword(s):  
Powdery Mildew ◽  
Field Resistance ◽  
Disease Development ◽  
Artificial Infection ◽  
Sources Of Resistance ◽  
Climate Conditions ◽  
High Productivity ◽  
Local Soil ◽  
The Family ◽  
Red Currant

Powdery mildew is one of the most harmful fungal diseases that causes economically significant damage to berry plantations. The disease is common in all areas of currant cultivation in the Russian Federation. In this regard, in modern conditions of intensive berry growing, the problem of breeding cultivars that are highly resistant to diseases and pests becomes urgent. Breeders have a difficult task to combine the adaptive potential of the cultivar with its annual high productivity and resistance to biotic environmental factors. When studying the adaptability of introduced cultivars of red currant and selected forms of the Institute to local soil and climate conditions, the following cultivars were identified as sources of economic and useful characteristics and involved in selection: ‘Belaya Potapenko’ as a complex source of resistance powdery mildew and high marketable and taste qualities of berries; SS 1426-21-80 as a source of high productivity and long racemes (raceme length 11-13 cm; up to 20 berries in the raceme). On their base the selection family of red currant has been developed: Belaya Potapenko × ♂SS 1426-21-80. The study of data on the destruction of hybrid seedlings of the selection family by powdery mildew showed that in epiphytotic conditions, the percentage of intensity of the disease development varies over the periods of screening from 0.2% in May to 20.4% in June. Such indicators served as a prerequisite for conducting a comparative test of breeding material in the field under artificial infection with powdery mildew. After artificial infection on the background of epiphytosis, the rate of intensity of the disease development increased slightly and amounted to 35.6% for the family. There were 30 highly resistant seedlings in the family, 10 of which have remained stable and highly resistant since 2018. In these plants we can assume the presence of the so-called field resistance, controlled by polygens, each of which does not give a visible effect of stability, but with different combinations determines one or another of its degree. Highly resistant seedlings will be used in further breeding studies to identify new sources of resistance to powdery mildew.

scholarly journals A New Identification Method Reveals the Resistance of an Extensive-Source Radish Collection to Plasmodiophora brassicae Race 4

Agronomy ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 792
Author(s):  
Haohui Yang ◽  
Yuxiang Yuan ◽  
Xiaochun Wei ◽  
Xiaohui Zhang ◽  
Haiping Wang ◽  
...  
Keyword(s):  
Plasmodiophora Brassicae ◽  
Central China ◽  
Clubroot Disease ◽  
Cruciferous Vegetable ◽  
Inoculation Methods ◽  
Identification Method ◽  
South Central ◽  
Disease Occurrence ◽  
Resistant Varieties ◽  
The Stability

Raphanus sativus, an important cruciferous vegetable, has been increasingly affected by clubroot disease. Establishing a stable and accurate resistance identification method for screening resistant germplasms is urgently needed in radish. In this study, the influence of inoculum concentration, inoculation methods, and pH of the substrate on disease occurrence was studied. The result showed that the disease index (DI) was highest at 2 × 108 spores/mL, the efficiency of two-stage combined inoculation methods was higher than others, and pH 6.5 was favorable for the infection of P. brassicae. By using this new method, DIs of 349 radish germplasms varying from 0.00 to 97.04, presented significantly different levels of resistance. Analysis showed that 85.06% germplasms from China were susceptible to P. brassicae, whilst 28 accessions were resistant and mainly distributed in east, southwest, northwest, and south-central China. Most of the exotic germplasms were resistant. Repeated experiments verified the stability and reliability of the method and the identity of germplasm resistance. In total, 13 immune, 5 highly resistant and 21 resistant radish accessions were identified. This study provides an original clubroot-tolerance evaluation technology and valuable materials for the development of broad-spectrum resistant varieties for sustainable clubroot management in radish and other cruciferous crops.

Clubroot in Brassica: Recent advances in genomics, breeding and disease management

Genome ◽  
2021 ◽  
Author(s):  
Muhammad Jakir Hasan ◽  
Swati Megha ◽  
Habibur Rahman
Keyword(s):  
Host Resistance ◽  
Molecular Basis ◽  
Host Plants ◽  
Cultural Practices ◽  
Plasmodiophora Brassicae ◽  
Genetic Resistance ◽  
Vegetable Production ◽  
Comprehensive Understanding ◽  
Clubroot Disease

Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques and ‘omics’ research have helped to identify several major loci, QTL and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective.

scholarly journals Effect of pathogen virulence on pathogenicity, host range and reproduction of Plasmodiophora brassicae, the causal agent of clubroot disease

Plant Disease ◽  
2021 ◽  
Author(s):  
Nazanin Zamani-Noor ◽  
Sinja Brand ◽  
Hans-Peter Soechting
Keyword(s):  
Plasmodiophora Brassicae ◽  
Brassica Species ◽  
Post Inoculation ◽  
Clubroot Disease ◽  
Alopecurus Myosuroides ◽  
Pathogen Virulence ◽  
Iberis Amara ◽  
Thlaspi Arvense ◽  
Resting Spores ◽  
Pathogen Dna

A series of greenhouse experiments was conducted to evaluate the effect of Plasmodiophora brassicae virulence on clubroot development and propagation of resting spores in 86 plant species from 19 botanical families. Plants were artificially inoculated with two isolates of P. brassicae, which were either virulent on clubroot-resistant oilseed rape cv. Mendel (P1 (+)) or avirulent on this cultivar (P1). Clubroot severity and the number of resting spores inside the roots were assessed 35 days post inoculation. Typical clubroot symptoms were observed only in the Brassicaceae family. P1 (+)-inoculated species exhibited more severe symptoms (2 to 10–fold more severe), bigger galls (1.1 to 5.8 fold heavier) and higher number of resting spores than the P1-inoculated plants. Among all Brassica species, Bunias orientalis, Coronopus squamatus and Raphanus sativus were fully resistant against both isolates, while Camelina sativa, Capsella bursa-pastoris, Coincya momensis, Descurainia sophia, Diplotaxis muralis, Erucastrum gallicum, Neslia paniculata, Sinapis alba, S. arvensis, Sisymbrium altissimum, S. loeselii and Thlaspi arvense were highly susceptible. Conringia orientalis, Diplotaxis tenuifolia, Hirschfeldia incana, Iberis amara, Lepidium campestre and Neslia paniculata were completely or partially resistant to P1-isolate but highly susceptible to P1 (+). These results propose that the basis for resistance in these species may be similar to that found in some commercial cultivars, and that these species could contribute to the build-up of inoculum of virulent pathotypes. Furthermore, the pathogen DNA was detected in Alopecurus myosuroides, Phacelia tanacatifolia, Papaver rhoeas and Pisum sativum. It can concluded that the number and diversity of hosts for P. brassicae are greater than previously reported.

scholarly journals Public Views on Priority Groups for COVID-19 Vaccination: A Survey from Iran

2021 ◽  
Vol In Press (In Press) ◽  
Author(s):  
Najmeh Moradi ◽  
Seyyed Taghi Heydari ◽  
Leila Zarei ◽  
Jalal Arabloo ◽  
Aziz Rezapour ◽  
...  
Keyword(s):  
Online Survey ◽  
Univariate Analysis ◽  
Random Order ◽  
The Elderly ◽  
Iranian Population ◽  
Vulnerable Groups ◽  
Vaccination Programs ◽  
The Family ◽  
Key Factor ◽  
Allocation Strategies

Background: In the initial coronavirus disease 2019 (COVID-19) vaccination program, prioritizing vulnerable groups is inevitable due to limited supply. Currently, most of the allocation strategies are focused on individuals’ characteristics. Objectives: The present study aimed to assess the opinions of Iranian population in specifying high-priority individuals and groups for COVID-19 vaccination. Methods: An online survey was conducted using some popular social media in Iran. The data was collected from Iranian population (878 individuals) aged 18 years and older during the COVID-19 pandemic (2 - 20 May 2020) to investigate their opinions towards vaccine allocation strategies at the family and society levels. In vaccine prioritizing within family three option and in vaccine prioritizing within society, seven population groups were introduced by the respondents in a random order, respectively. To analyze the data, mean rank and univariate analysis was used. Results: Healthcare workers, high-risk patients, and the elderly were the first priority groups for a vaccination with a mean rank of 2.8, 2.8, and 3.8, respectively. The least priority group was policymakers and executive managers (mean rank = 5.75). At the family level, 64% of the respondents introduced one of the family members as the first priority for vaccination, followed by their children (29%) and themselves (7%). No significant relationship was observed between respondents’ characteristics and their prioritization in vaccine prioritizing within society. Conclusions: Although involving public preference in decision-making is a key factor for the success of policies, careful design and implementation of vaccination programs through considering risk-benefit assessment is strongly recommended.

scholarly journals THE EFFECTIVENESS OF IMMUNOLOGICAL EVALUATION OF RESISTANCE OF THE WHITE CABBAGE LINES TO PLASMODIOPHORA BRASSICAE WOR. AGAINST ARTIFICIAL INFECTION BACKGROUND

2018 ◽  
pp. 97-100
Author(s):  
A. A. Ushakov ◽  
L. L. Bondareva ◽  
I. A. Engalycheva
Keyword(s):  
Plasmodiophora Brassicae ◽  
Background Intensity ◽  
Federal State ◽  
Causative Organism ◽  
Atmospheric Conditions ◽  
Artificial Infection ◽  
Entire Area ◽  
Clubroot Disease ◽  
White Cabbage ◽  
The Impact

Clubroot disease (causative organism Plasmodiophora brassicae Wor.) is among the most economically important and harmful diseases of the cole crops, and the damage due to this disease may reach up to 50-75% of the yield and even 100% in epiphytotics years. Even resistant varieties become susceptible over the years, because of appearance of the new pathogen races and change of climatic conditions in the main growing areas of the crop. In this context the Laboratory of Plant Immunity and Protection, of Federal State Budgetary Scientific Institution “Federal Scientific Vegetable Center” implements continuous phytoimmunological evaluation of collection and selection specimens and also directional material rather than just annual monitoring of causative organism dissemination in order to find new resistance sources. For this purpose an artificial infection background is used: compost obtained from decomposed nodules on the cabbage roots affected by clubroot disease (infection load 105-106 spores/cm3). The resistance of white cabbage varieties was evaluated during the harvesting period using five-point score of the root system damage, which formed the basis for categorization into resistance groups. For the analysis of artificial background intensity and specimen ranking the individual plants of the white cabbage variety Slava 1305, which is a susceptibility standard, were randomly planted in the entire area of the infection background. The impact of atmospheric conditions in the study year on the results of phytopathological evaluation of cabbage selection specimens against the infection background is demonstrated. Under unfavorable conditions for pathogen development (2014) the most specimens (74%) were categorized as relatively resistant, while in favourable for pathogen year 2015 relatively resistant specimens comprised only 5% of the total number of studied specimens. Since the same specimen may show different level of resistance depending on the year conditions, the stability of character manifestation is the important criterion for identification of the resistance resources. Phytopathological evaluation aimed on selection of clubroot-resistant forms in the Moscow region should last for at least three years even with the use of infection background. Long-lasting evaluation showed that the strains No 234/15,140/14,216/17 exhibiting high resistance to clubroot against artificial infection background regardless of the year conditions are the most valuable for selection. The resistance of white cabbage selection varieties to clubroot disease was studied against the infection background.

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