scholarly journals The switchgrass microbiome: A review of structure, function, and taxonomic distribution

2020 ◽  
Author(s):  
Rachel Hestrin ◽  
Marissa Ruth Lee ◽  
Briana K. Whitaker ◽  
Jennifer Pett-Ridge
Keyword(s):  
Structure Function ◽  
Mycorrhizal Fungi ◽  
Panicum Virgatum ◽  
Plant Biomass ◽  
Scale Validation ◽  
Fungal Endophytes ◽  
Plant Tolerance ◽  
Host Genotype ◽  
High Productivity ◽  
Experimental Findings

Switchgrass (Panicum virgatum L.) has been championed as a promising bioenergy crop due to its high productivity across a wide environmental range. The switchgrass microbiome—including bacteria, archaea, fungi, and other microbiota inhabiting soil and plant tissues—can influence plant function substantially. We conducted a review of the literature investigating switchgrass microbiome structure, key functional roles, and taxa isolated from field-grown plants. While site conditions and plant compartment (i.e., location within shoots, roots, or root-influenced soil) appear to be the strongest drivers of switchgrass microbiome structure, the microbiome is also shaped by climate, season, and host genotype. Studies comparing across plant species show that the switchgrass microbiome is more similar to the microbiomes of other perennial plants than to the microbiomes of annual plants. Members of the switchgrass microbiome confer several benefits to plants. Most notably, mycorrhizal fungi can increase plant biomass many-fold, associative N-fixing bacteria can provide a substantial portion of the plant’s nitrogen demand, and fungal endophytes can improve plant tolerance to drought. Although the fungi and bacteria cultured from switchgrass represent only a portion of the microbiome, these serve as a valuable resource for researchers interested in investigating functional outcomes of the switchgrass microbiome. We highlight areas where additional research is necessary for a more comprehensive understanding of switchgrass microbiome structure, function, and potential to enhance sustainable bioenergy production. Key gaps include the role of understudied organisms (e.g., viruses, microeukaryotes, and non-mycorrhizal fungi), multitrophic relationships, mechanisms underpinning switchgrass-microbiome interactions, and field-scale validation of experimental findings.

scholarly journals Macrophyte Potential to Treat Leachate Contaminated with Wood Preservatives: Plant Tolerance and Bioaccumulation Capacity

Plants ◽  
2020 ◽  
Vol 9 (12) ◽  
pp. 1774
Author(s):  
Emmanuelle Demers ◽  
Margit Kõiv-Vainik ◽  
Sara Yavari ◽  
Michel Mench ◽  
Lilian Marchand ◽  
...  
Keyword(s):  
Plant Biomass ◽  
Belowground Biomass ◽  
Wood Preservatives ◽  
Chlorinated Phenols ◽  
Plant Tolerance ◽  
Treatment Wetland ◽  
High Productivity ◽  
Contamination Levels ◽  
Contamination Concentration ◽  
Copper Arsenate

Pentachlorophenol and chromated copper arsenate (CCA) have been used worldwide as wood preservatives, but these compounds can toxify ecosystems when they leach into the soil and water. This study aimed to evaluate the capacity of four treatment wetland macrophytes, Phalaris arundinacea, Typha angustifolia, and two subspecies of Phragmites australis, to tolerate and treat leachates containing wood preservatives. The experiment was conducted using 96 plant pots in 12 tanks filled with three leachate concentrations compared to uncontaminated water. Biomass production and bioaccumulation were measured after 35 and 70 days of exposure. There were no significant effects of leachate contamination concentration on plant biomass for any species. No contaminants were detected in aboveground parts of the macrophytes, precluding their use for phytoextraction within the tested contamination levels. However, all species accumulated As and chlorinated phenols in belowground parts, and this accumulation was more prevalent under a more concentrated leachate. Up to 0.5 mg pentachlorophenol/kg (from 81 µg/L in the leachate) and 50 mg As/kg (from 330 µg/L in the leachate) were accumulated in the belowground biomass. Given their high productivity and tolerance to the contaminants, the tested macrophytes showed phytostabilization potential and could enhance the degradation of phenols from leachates contaminated with wood preservatives in treatment wetlands.

scholarly journals Delivery of Inoculum of Rhizophagus irregularis via Seed Coating in Combination with Pseudomonas libanensis for Cowpea Production

Agronomy ◽  
2019 ◽  
Vol 9 (1) ◽  
pp. 33 ◽  
Author(s):  
Ying Ma ◽  
Aleš Látr ◽  
Inês Rocha ◽  
Helena Freitas ◽  
Miroslav Vosátka ◽  
...  
Keyword(s):  
Plant Growth ◽  
Seed Yield ◽  
Precision Agriculture ◽  
Mycorrhizal Fungi ◽  
Large Scale ◽  
Plant Biomass ◽  
Rhizophagus Irregularis ◽  
Plant Growth Promoting Bacteria ◽  
Seed Coating ◽  
Plant Tolerance

Cowpea (Vigna unguiculata L. Walp) is an important legume grown primarily in semi-arid area. Its production is generally inhibited by various abiotic and biotic stresses. The use of beneficial microorganisms (e.g., plant growth promoting bacteria (PGPB) and arbuscular mycorrhizal fungi (AMF)) can enhance agricultural production, as these microorganisms can improve soil fertility and plant tolerance to environmental stresses, thus enhancing crop yield in an eco-friendly manner. Application of PGPB and AMF in large scale agriculture needs to be improved. Thus, the use of seed coating could be an efficient mechanism for placement of inocula into soils. The aim of this study was to evaluate the effects of the AMF Rhizophagus irregularis BEG140 and the PGPB Pseudomonas libanensis TR1 alone or in combination on the biomass and physiological traits of cowpea. Four treatments were set: (i) non-inoculated control; (ii) PGPB; (iii) AMF applied via seed coating; and (iv) PGPB + AMF applied via seed coating. Cowpea plants inoculated via seed coating with R. irregularis and those inoculated with R. irregularis + P. libanensis showed root mycorrhizal colonization of 21.7% and 24.2%, respectively. PGPB P. libanensis was efficient in enhancing plant biomass and seed yield. There was no benefit of single (AMF) or dual (PGPB + AMF) inoculation on plant growth or seed yield. The application of beneficial soil microorganisms can be a viable approach for sustainable cowpea production in precision agriculture scenarios.

scholarly journals Physiological and biochemical responses of soybean plants inoculated with Arbuscular mycorrhizal fungi and Bradyrhizobium under drought stress

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Mohamed S. Sheteiwy ◽  
Dina Fathi Ismail Ali ◽  
You-Cai Xiong ◽  
Marian Brestic ◽  
Milan Skalicky ◽  
...  
Keyword(s):  
Drought Stress ◽  
Arbuscular Mycorrhizal Fungi ◽  
Secondary Metabolism ◽  
Mycorrhizal Fungi ◽  
Plant Biomass ◽  
Arbuscular Mycorrhizal ◽  
Growth And Yield ◽  
Relative Expression ◽  
Reverse Trend ◽  
Soybean Plants

Abstract Background The present study aims to study the effects of biofertilizers potential of Arbuscular Mycorrhizal Fungi (AMF) and Bradyrhizobium japonicum (B. japonicum) strains on yield and growth of drought stressed soybean (Giza 111) plants at early pod stage (50 days from sowing, R3) and seed development stage (90 days from sowing, R5). Results Highest plant biomass, leaf chlorophyll content, nodulation, and grain yield were observed in the unstressed plants as compared with water stressed-plants at R3 and R5 stages. At soil rhizosphere level, AMF and B. japonicum treatments improved bacterial counts and the activities of the enzymes (dehydrogenase and phosphatase) under well-watered and drought stress conditions. Irrespective of the drought effects, AMF and B. japonicum treatments improved the growth and yield of soybean under both drought (restrained irrigation) and adequately-watered conditions as compared with untreated plants. The current study revealed that AMF and B. japonicum improved catalase (CAT) and peroxidase (POD) in the seeds, and a reverse trend was observed in case of malonaldehyde (MDA) and proline under drought stress. The relative expression of the CAT and POD genes was up-regulated by the application of biofertilizers treatments under drought stress condition. Interestingly a reverse trend was observed in the case of the relative expression of the genes involved in the proline metabolism such as P5CS, P5CR, PDH, and P5CDH under the same conditions. The present study suggests that biofertilizers diminished the inhibitory effect of drought stress on cell development and resulted in a shorter time for DNA accumulation and the cycle of cell division. There were notable changes in the activities of enzymes involved in the secondary metabolism and expression levels of GmSPS1, GmSuSy, and GmC-INV in the plants treated with biofertilizers and exposed to the drought stress at both R3 and R5 stages. These changes in the activities of secondary metabolism and their transcriptional levels caused by biofertilizers may contribute to increasing soybean tolerance to drought stress. Conclusions The results of this study suggest that application of biofertilizers to soybean plants is a promising approach to alleviate drought stress effects on growth performance of soybean plants. The integrated application of biofertilizers may help to obtain improved resilience of the agro ecosystems to adverse impacts of climate change and help to improve soil fertility and plant growth under drought stress.

scholarly journals A Meta-Analytical Approach on Arbuscular Mycorrhizal Fungi Inoculation Efficiency on Plant Growth and Nutrient Uptake

Agriculture ◽  
2020 ◽  
Vol 10 (9) ◽  
pp. 370
Author(s):  
Murugesan Chandrasekaran
Keyword(s):  
Plant Growth ◽  
Arbuscular Mycorrhizal Fungi ◽  
Nutrient Uptake ◽  
Mycorrhizal Fungi ◽  
Host Plants ◽  
Plant Biomass ◽  
Meta Analysis ◽  
Arbuscular Mycorrhizal ◽  
Growth Responses ◽  
Mycorrhizal Plants

Arbuscular mycorrhizal fungi (AMF) are obligate symbionts of higher plants which increase the growth and nutrient uptake of host plants. The primary objective was initiated based on analyzing the enormity of optimal effects upon AMF inoculation in a comparative bias between mycorrhizal and non-mycorrhizal plants stipulated on plant biomass and nutrient uptake. Consequently, in accomplishing the above-mentioned objective a vast literature was collected, analyzed, and evaluated to establish a weighted meta-analysis irrespective of AMF species, plant species, family and functional group, and experimental conditions in the context of beneficial effects of AMF. I found a significant increase in the shoot, root, and total biomass by 36.3%, 28.5%, and, 29.7%, respectively. Moreover, mycorrhizal plants significantly increased phosphorus, nitrogen, and potassium uptake by 36.3%, 22.1%, and 18.5%, respectively. Affirmatively upon cross-verification studies, plant growth parameters intensification was accredited to AMF (Rhizophagus fasciculatus followed by Funniliforme mosseae), plants (Triticum aestivum followed by Solanum lycopersicum), and plant functional groups (dicot, herbs, and perennial) were the additional vital important significant predictor variables of plant growth responses. Therefore, the meta-analysis concluded that the emancipated prominent root characteristics, increased morphological traits that eventually help the host plants for efficient phosphorus uptake, thereby enhancing plant biomass. The present analysis can be rationalized for any plant stress and assessment of any microbial agent that contributes to plant growth promotion.

scholarly journals Cultivar-Dependent Responses in Plant Growth, Leaf Physiology, Phosphorus Use Efficiency, and Tuber Quality of Potatoes Under Limited Phosphorus Availability Conditions

2021 ◽  
Vol 12 ◽  
Author(s):  
Leangsrun Chea ◽  
Ana Meijide ◽  
Catharina Meinen ◽  
Elke Pawelzik ◽  
Marcel Naumann
Keyword(s):  
Tuber Yield ◽  
Plant Biomass ◽  
P Uptake ◽  
Tuber Quality ◽  
P Availability ◽  
Plant Tolerance ◽  
P Deficiency ◽  
Leaf Physiology ◽  
Use Efficiency

The limited availability of phosphorus (P) in soils causes a major constraint in the productivity of potatoes, which requires increased knowledge of plant adaptation responses in this condition. In this study, six potato cultivars, namely, Agria, Lady Claire, Milva, Lilly, Sieglinde, and Verdi, were assessed for their responses on plant growth, leaf physiology, P use efficiency (PUE), and tuber quality with three P levels (Plow, Pmed, and Phigh). The results reveal a significant variation in the cultivars in response to different P availabilities. P-efficient cultivars, Agria, Milva, and Lilly, possessed substantial plant biomass, tuber yield, and high P uptake efficiency (PUpE) under low P supply conditions. The P-inefficient cultivars, Lady Claire, Sieglinde, and Verdi, could not produce tubers under P deprivation conditions, as well as the ability to efficiently uptake P under low-level conditions, but they were efficient in P uptake under high soil P conditions. Improved PUpE is important for plant tolerance with limited P availability, which results in the efficient use of the applied P. At the leaf level, increased accumulations of nitrate, sulfate, sucrose, and proline are necessary for a plant to acclimate to P deficiency-induced stress and to mobilize leaf inorganic phosphate to increase internal PUE and photosynthesis. The reduction in plant biomass and tuber yield under P-deficient conditions could be caused by reduced CO2 assimilation. Furthermore, P deficiency significantly reduced tuber yield, dry matter, and starch concentration in Agria, Milva, and Lilly. However, contents of tuber protein, sugars, and minerals, as well as antioxidant capacity, were enhanced under these conditions in these cultivars. These results highlight the important traits contributing to potato plant tolerance under P-deficient conditions and indicate an opportunity to improve the P efficiency and tuber quality of potatoes under deficient conditions using more efficient cultivars. Future research to evaluate molecular mechanisms related to P and sucrose translocation, and minimize tuber yield reduction under limited P availability conditions is necessary.

scholarly journals Application of Nano-Silicon Dioxide Improves Salt Stress Tolerance in Strawberry Plants

Agronomy ◽  
2019 ◽  
Vol 9 (5) ◽  
pp. 246 ◽  
Author(s):  
Saber Avestan ◽  
Mahmood Ghasemnezhad ◽  
Masoud Esfahani ◽  
Caitlin S. Byrt
Keyword(s):  
Salt Stress ◽  
Silicon Dioxide ◽  
Chlorophyll Content ◽  
Plant Biomass ◽  
Epicuticular Wax ◽  
Carotenoid Content ◽  
Plant Tolerance ◽  
Sem Images ◽  
Nano Silicon ◽  
Epicuticular Wax Layer

Silicon application can improve productivity outcomes for salt stressed plants. Here, we describe how strawberry plants respond to treatments including various combinations of salt stress and nano-silicon dioxide, and assess whether nano-silicon dioxide improves strawberry plant tolerance to salt stress. Strawberry plants were treated with salt (0, 25 or 50 mM NaCl), and the nano-silicon dioxide treatments were applied to the strawberry plants before (0, 50 and 100 mg L−1) or after (0 and 50 mg L−1) flowering. The salt stress treatments reduced plant biomass, chlorophyll content, and leaf relative water content (RWC) as expected. Relative to control (no NaCl) plants the salt treated plants had 10% lower membrane stability index (MSI), 81% greater proline content, and 54% greater cuticular transpiration; as well as increased canopy temperature and changes in the structure of the epicuticular wax layer. The plants treated with nano-silicon dioxide were better able to maintain epicuticular wax structure, chlorophyll content, and carotenoid content and accumulated less proline relative to plants treated only with salt and no nano-silicon dioxide. Analysis of scanning electron microscopic (SEM) images revealed that the salt treatments resulted in changes in epicuticular wax type and thickness, and that the application of nano-silicon dioxide suppressed the adverse effects of salinity on the epicuticular wax layer. Nano-silicon dioxide treated salt stressed plants had increased irregular (smoother) crystal wax deposits in their epicuticular layer. Together these observations indicate that application of nano-silicon dioxide can limit the adverse anatomical and biochemical changes related to salt stress impacts on strawberry plants and that this is, in part, associated with epicuticular wax deposition.

scholarly journals The effect of inoculation of pea plants with mycorrhizal fungi and Rhizobium on nitrogen and phosphorus assimilation

2011 ◽  
Vol 52 (No. 10) ◽  
pp. 435-440 ◽  
Author(s):  
M. Geneva ◽  
G. Zehirov ◽  
E. Djonova ◽  
N. Kaloyanova ◽  
G. Georgiev ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Mycorrhizal Fungi ◽  
Glomus Mosseae ◽  
Rhizobium Leguminosarum ◽  
Glomus Intraradices ◽  
Plant Biomass ◽  
Phosphorus Level ◽  
Nitrogen And Phosphorus ◽  
Nitrogen Fixation Activity ◽  
Fixation Activity

The study evaluated the response of pea (Pisum sativum cv. Avola) to arbuscular mycorrhizal fungi (AM) species Glomus mosseae and Glomus intraradices and Rhizobium leguminosarum bv. viceae, strain D 293, regarding the growth, photosynthesis, nodulation and nitrogen fixation activity. Pea plants were grown in a glasshouse until the flowering stage (35 days), in 4 kg plastic pots using leached cinnamonic forest soil (Chromic Luvisols – FAO) at P levels 13.2 (P1) and 39.8 (P2) mg P/kg soil. The obtained results demonstrated that the dual inoculation of pea plants significantly increased the plant biomass, photosynthetic rate, nodulation, and nitrogen fixation activity in comparison with single inoculation with Rhizobium leguminosarum bv. viceae strain D 293. On the other hand, coinoculation significantly increased the total phosphorus content in plant tissue, acid phosphatase activity and percentage of root colonization. The effectiveness of coinoculation with Rhizobium leguminosarum and Glomus mosseae was higher at the low phosphorus level while the coinoculation with Glomus intraradices appeared to be the most effective at higher phosphorus level.

scholarly journals Drivers of Foliar Fungal Endophytic Communities of Kudzu (Pueraria montana var. lobata) in the Southeast United States

Diversity ◽  
2020 ◽  
Vol 12 (5) ◽  
pp. 185
Author(s):  
Maryam Shahrtash ◽  
Shawn P. Brown
Keyword(s):  
United States ◽  
Plant Pathogens ◽  
Invasive Plant ◽  
Fungal Endophytes ◽  
Management Strategies ◽  
Environmental Parameters ◽  
Plant Management ◽  
Host Genotype ◽  
Southeast United States ◽  
Pueraria Montana

Fungal endophytes play important roles in plant fitness and plant–microbe interactions. Kudzu (Pueraria montana var. lobata) is a dominant, abundant, and highly aggressive invasive plant in the Southeast United States. Kudzu serves as a pathogen reservoir that impacts economically important leguminous crops. We conducted the first investigations on kudzu fungal endophytes (Illumina MiSeq—ITS2) to elucidate drivers of endophytic communities across the heart of the invasive range in the Southeast United States (TN, MS, AL, GA). We tested the impacts of multiple environmental parameters (Chlorophyll, NO3−, K+, soil pH, leaf area, host genotype, traffic intensity, and geographic location) on foliar endophyte communities. Endophytic communities were diverse and structured by many factors in our PerMANOVA analyses, but location, genotype, and traffic (proxy for pollution) were the strongest drivers of community composition (R2 = 0.152, p < 0.001, R2 = 0.129, p < 0.001, and R2 = 0.126, p < 0.001, respectively). Further, we examined the putative ecological interactions between endophytic fungi and plant pathogens. We identify numerous OTUs that are positively and strongly associated with pathogen occurrence, largely within the families Montagnulaceae and Tremellales incertae sedis. Taken together, these data suggest location, host genetics and local pollution play instrumental roles in structuring communities, and integrative plant management must consider these factors when developing management strategies.

Impact of arbuscular mycorrhizal fungi and earthworms on soil aggregate stability, glomalin, and performance of pigeonpea, Cajanus cajan

Soil Research ◽  
2019 ◽  
Vol 57 (1) ◽  
pp. 53 ◽  
Author(s):  
Mary N. Muchane ◽  
Mirjam M. Pulleman ◽  
Bernard Vanlauwe ◽  
Joyce Jefwa ◽  
Thomas W. Kuyper
Keyword(s):  
Mycorrhizal Fungi ◽  
Cajanus Cajan ◽  
Plant Biomass ◽  
Aggregate Size ◽  
Arbuscular Mycorrhizal ◽  
Hyphal Length ◽  
Root Colonisation ◽  
Size Classes ◽  
Crop Performance ◽  
Epigeic Earthworms

Earthworms and arbuscular mycorrhizal fungi (AMF) modify soil physical and chemical properties. However, little is known about how their interactions affect water-stable aggregation, glomalin and crop performance. A greenhouse experiment was run for 9 months to test the effects of earthworms (endogeic, Pontoscolex corethrurus; and epigeic, Dichogaster bolaui) and AMF (none, Glomus etunicatum and Scutellospora verrucosa) on water-stable aggregation, glomalin levels in aggregate size classes and crop performance. The test crop was pigeonpea (Cajanus cajan (L.) Millsp.). The soil material used for the experiment was a humic nitisol from central Kenya mixed with sand (ratio 1:1). Grass residue (equivalent to 20tha–1) was placed on top. The AMF root colonisation and external hyphal length, water-stable macroaggregates and microaggregates, total and easily-extractable glomalin in aggregate size classes, plant biomass and plant N and P uptake were measured. Earthworms were a major source of variation for soil aggregation, glomalin content and crop performance. The epigeic earthworms (D. bolaui) increased the amount of water-stable macroaggregates (by 10%) and glomalin in microaggregates and improved crop (growth and biomass) performance. The endogeic earthworms (P. corethrurus) reduced external hyphal length, root colonisation and crop performance but had no effect on water-stable aggregates and glomalin levels in in aggregate size classes. A significant AMF×earthworm interaction was observed for plant biomass and concentrations of nitrogen (N) and phosphorus (P). The AMF species together with epigeic earthworms increased plant biomass and N and P concentrations. Our results contribute to the understanding of interactions between AMF and earthworms in relation to soil aggregation, plant productivity and nutrient uptake.

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