scholarly journals Cell-autonomous generation of the wave pattern within the vertebrate segmentation clock

2021 ◽  
Author(s):  
Laurel A Rohde ◽  
Arianne Bercowsky-Rama ◽  
Jose Negrete ◽  
Guillaume Valentin ◽  
Sundar Ram Naganathan ◽  
...  
Keyword(s):  
Genetic Network ◽  
Wave Pattern ◽  
Tissue Level ◽  
The Body ◽  
Striking Similarity ◽  
Embryonic Patterning ◽  
Segmentation Clock ◽  
Physical Description ◽  
Extrinsic Cues ◽  
Open Question

Sequential segmentation of the body axis is fundamental to vertebrate embryonic patterning. This relies on the segmentation clock, a multi-cellular oscillating genetic-network, which mainifests as tissue-level kinematic waves of gene expression that arrest at the position of each new segment. How this hallmark wave pattern is generated is an open question. We compare cellular-resolution oscillatory patterns in the embryo to those generated cell-autonomously in culture without extrinsic signals. We find striking similarity, albeit with greater variability in the timing of clock arrest in culture. Our simple physical description of a clock controlled by a noisy cell-intrinsic timer captures these dynamics. We propose the segmentation clock integrates an intrinsic, timer-driven oscillatory program, which underlies the waves and arrest, with extrinsic cues regulating the intrinsic timer's duration and precision.

scholarly journals The wave pattern of a doublet in a stream

1928 ◽  
Vol 121 (788) ◽  
pp. 515-523 ◽  
Keyword(s):  
Surface Effect ◽  
Ideal Point ◽  
Finite Size ◽  
Wave Pattern ◽  
Wave Resistance ◽  
Point Of View ◽  
The Body ◽  
Surface Elevation ◽  
More Care ◽  
Forced Waves

The following paper is a study of the surface waves caused by a doublet in a uniform stream, and in particular the variation in the pattern with the velocity of the stream or the depth of the doublet. In most recent work on this subject attention has been directed more to the wave resistance, which can be evaluated with less difficulty than is involved in a detailed study of the waves; in fact, it would seem that it is not necessary for that purpose to know the surface elevation completely, but only certain significant terms at large distances from the disturbance. Recent experimental work has shown con­siderable agreement between theoretical expressions for wave resistance and results for ship models of simple form, and attempts have been made at a similar comparison for the surface elevation in the neighbourhood of the ship. In the latter respect it may be necessary to examine expressions for the surface elevation with more care, as they are not quite determinate; any suitable free disturbance may be superposed upon the forced waves. For instance, it is well known that in a frictionless liquid a possible solution is one which gives waves in advance as well as in the rear of the ship, and the practical solution is obtained by superposing free waves which annul those in advance, or by some equivalent artifice. This process is simple and definite for an ideal point disturbance, but for a body of finite size or a distributed disturbance the complete surface elevation in the neighbourhood of the body requires more careful specification as regards the local part due to each element. It had been intended to consider some expressions specially from this point of view, but as the matter stands at present it would entail a very great amount of numerical calculation, and the present paper is limited to a much simpler problem although also involving considerable computation. A horizontal doublet of given moment is at a depth f below the surface of a stream of velocity c ; the surface effect may be described as a local disturbance symmetrical fore and aft of the doublet together with waves to the rear. Two points are made in the following work.

Onset of the segmentation clock in the chick embryo: evidence for oscillations in the somite precursors in the primitive streak

Development ◽  
2002 ◽  
Vol 129 (5) ◽  
pp. 1107-1117 ◽  
Author(s):  
Caroline Jouve ◽  
Tadahiro Iimura ◽  
Olivier Pourquie
Keyword(s):  
Continuous Process ◽  
Notch Pathway ◽  
Primitive Streak ◽  
The Body ◽  
Paraxial Mesoderm ◽  
Segmentation Clock ◽  
Head Mesoderm ◽  
Dynamic Expression ◽  
Mesoderm Formation ◽  
Cyclic Gene

Vertebrate somitogenesis is associated with a molecular oscillator, the segmentation clock, which is defined by the periodic expression of genes related to the Notch pathway such as hairy1 and hairy2 or lunatic fringe (referred to as the cyclic genes) in the presomitic mesoderm (PSM). Whereas earlier studies describing the periodic expression of these genes have essentially focussed on later stages of somitogenesis, we have analysed the onset of the dynamic expression of these genes during chick gastrulation until formation of the first somite. We observed that the onset of the dynamic expression of the cyclic genes in chick correlated with ingression of the paraxial mesoderm territory from the epiblast into the primitive streak. Production of the paraxial mesoderm from the primitive streak is a continuous process starting with head mesoderm formation, while the streak is still extending rostrally, followed by somitic mesoderm production when the streak begins its regression. We show that head mesoderm formation is associated with only two pulses of cyclic gene expression. Because such pulses are associated with segment production at the body level, it suggests the existence of, at most, two segments in the head mesoderm. This is in marked contrast to classical models of head segmentation that propose the existence of more than five segments. Furthermore, oscillations of the cyclic genes are seen in the rostral primitive streak, which contains stem cells from which the entire paraxial mesoderm originates. This indicates that the number of oscillations experienced by somitic cells is correlated with their position along the AP axis.

scholarly journals The Polycomb group protein MEDEA controls cell proliferation and embryonic patterning in Arabidopsis

2020 ◽  
Author(s):  
Sara Simonini ◽  
Marian Bemer ◽  
Stefano Bencivenga ◽  
Valeria Gagliardini ◽  
Nuno D. Pires ◽  
...  
Keyword(s):  
Cell Proliferation ◽  
Cell Lineage ◽  
Embryonic Cell ◽  
The Body ◽  
Polycomb Group ◽  
Normal Embryo ◽  
Embryonic Patterning ◽  
Polycomb Group Protein ◽  
Group Protein

Establishing the body plan of a multicellular organism relies on precisely orchestrated cell divisions coupled with pattern formation. In animals, cell proliferation and embryonic patterning are regulated by Polycomb group (PcG) proteins that form various multisubunit complexes (Grossniklaus and Paro, 2014). The evolutionary conserved Polycomb Repressive Complex 2 (PRC2) trimethylates histone H3 at lysine 27 (H3K27me3) and comes in different flavors in the model plant Arabidopsis thaliana (Förderer et al., 2016; Grossniklaus and Paro, 2014). The histone methyltransferase MEDEA (MEA) is part of the FERTILIZATION INDEPENDENT SEED (FIS)-PRC2 required for seed development4. Although embryos derived from mea mutant egg cells show morphological abnormalities (Grossniklaus et al., 1998), defects in the development of the placenta-like endosperm are considered the main cause of seed abortion (Kinoshita et al., 1999; Scott et al., 1998), and a role of FIS-PRC2 in embryonic patterning was dismissed (Bouyer et al., 2011; Leroy et al., 2007). Here, we demonstrate that endosperm lacking MEA activity sustains normal embryo development and that embryos derived from mea mutant eggs abort even in presence of a wild-type endosperm because MEA is required for embryonic patterning and cell lineage determination. We show that, similar to PcG proteins in mammals, MEA regulates embryonic growth by repressing the transcription of core cell cycle components. Our work demonstrates that Arabidopsis embryogenesis is under epigenetic control of maternally expressed PcG proteins, revealing that PRC2 was independently recruited to control embryonic cell proliferation and patterning in animals and plants.

Surface Gravity Waves

2017 ◽  
Author(s):  
John A. Adam
Keyword(s):  
Gravity Waves ◽  
Water Waves ◽  
Water Surface ◽  
Wave Pattern ◽  
The Body ◽  
Surface Gravity ◽  
Shallow Water Waves ◽  
Ship Waves ◽  
Surface Gravity Waves ◽  
Basic Fluid

This chapter deals with the underlying mathematics of surface gravity waves, defined as gravity waves observed on an air–sea interface of the ocean. Surface gravity waves, or surface waves, differ from internal waves, gravity waves that occur within the body of the water (such as between parts of different densities). Examples of gravity waves are wind-generated waves on the water surface, as well tsunamis and ocean tides. Wind-generated gravity waves on the free surface of the Earth's seas, oceans, ponds, and lakes have a period of between 0.3 and 30 seconds. The chapter first describes the basic fluid equations before discussing the dispersion relations, with a particular focus on deep water waves, shallow water waves, and wavepackets. It also considers ship waves and how dispersion affects the wave pattern produced by a moving object, along with long and short waves.

scholarly journals Anaemia and Haemoglobin Status: A New Concept and a New Method of Assessment

1996 ◽  
Vol 17 (1) ◽  
pp. 1-7 ◽  
Author(s):  
Rainer Gross ◽  
Marcus Gliwitzki ◽  
Patrick Gross ◽  
Klaus Frank
Keyword(s):  
Oxygen Supply ◽  
Haemoglobin Concentration ◽  
Tissue Level ◽  
Intervention Strategies ◽  
Blood Oxygenation ◽  
The Body ◽  
Non Invasive ◽  
Method Of Assessment ◽  
The Impact ◽  
Tissue Oxygen Supply

Traditionally, anaemia has been determined and interpreted by the magnitude and severity of iron deficiency and the impact of intervention strategies. Internationally, it is defined as a state in which the quality and/or quantity of circulating red cells are reduced below a normal level The body employs several mechanisms during the development of anaemia to maintain the oxygen supply to the tissues. Thus, applying any quantitative cut-off point as an indicator for anaemia may lead to misclassification, since haemoglobin concentration does not necessarily reflect the level of tissue oxygen supply. Ideally, an assessment strategy should be able to determine both the degree of haemoglobin oxygenation and the haemoglobin concentration at a tissue level. The Erlangen microlight-guide spectrophotometer is a non-invasive instrument that can assess both capillary blood oxygenation and relative haemoglobin concentration.

EMBRYONIC SOMITE FORMATION GENERATED BY GENETIC NETWORK OSCILLATIONS WITH NOISE

2010 ◽  
Vol 20 (02) ◽  
pp. 341-347
Author(s):  
KARINA I. MAZZITELLO ◽  
CONSTANCIO M. ARIZMENDI ◽  
ALVARO L. SALAS BRITO ◽  
HILARY G. E. HENTSCHEL
Keyword(s):  
Feedback Regulation ◽  
Positional Information ◽  
Genetic Network ◽  
The Body ◽  
Negative Feedback Regulation ◽  
Network Oscillations ◽  
Spatial Periodicity ◽  
Somite Formation ◽  
Spatially Periodic ◽  
Diploid Cells

In most vertebrate species, the body axis is generated by the formation of repeated transient structures called somites. This spatial periodicity in somitogenesis has been related to the genetic network oscillations in certain mRNAs and their associated gene products in the cells forming the presomitic mesoderm. The current molecular view of the mechanism underlying these oscillations involves negative-feedback regulation at transcriptional and translational levels. The spatially periodic nature of somite formation suggests that the genetic network involved must display intracellular oscillations that interact with a longitudinal positional information gradient, called determination front, down the axis of vertebrate embryos to create this spatial patterning. Here, we consider a simple model for diploid cells based on this current biological picture considering gene regulation as a noisy process relevant in a real developmental situation and study its consequences for somitogenesis. Comparison is made with the known properties of somite formation in the zebrafish embryo.

scholarly journals Subcellular and supracellular mechanical stress prescribes cytoskeleton behavior in Arabidopsis cotyledon pavement cells

eLife ◽  
2014 ◽  
Vol 3 ◽  
Author(s):  
Arun Sampathkumar ◽  
Pawel Krupinski ◽  
Raymond Wightman ◽  
Pascale Milani ◽  
Alexandre Berquand ◽  
...  
Keyword(s):  
Cell Wall ◽  
Mechanical Stress ◽  
Cell Shape ◽  
Tissue Level ◽  
Pavement Cells ◽  
Force Microscopy ◽  
Atomic Force ◽  
Response To Stress ◽  
Maximal Tensile Stress ◽  
Open Question

Although it is a central question in biology, how cell shape controls intracellular dynamics largely remains an open question. Here, we show that the shape of Arabidopsis pavement cells creates a stress pattern that controls microtubule orientation, which then guides cell wall reinforcement. Live-imaging, combined with modeling of cell mechanics, shows that microtubules align along the maximal tensile stress direction within the cells, and atomic force microscopy demonstrates that this leads to reinforcement of the cell wall parallel to the microtubules. This feedback loop is regulated: cell-shape derived stresses could be overridden by imposed tissue level stresses, showing how competition between subcellular and supracellular cues control microtubule behavior. Furthermore, at the microtubule level, we identified an amplification mechanism in which mechanical stress promotes the microtubule response to stress by increasing severing activity. These multiscale feedbacks likely contribute to the robustness of microtubule behavior in plant epidermis.

Control of skin blood flow in the neutral zone of human body temperature regulation

1996 ◽  
Vol 80 (4) ◽  
pp. 1249-1257 ◽  
Author(s):  
M. V. Savage ◽  
G. L. Brengelmann
Keyword(s):  
Blood Flow ◽  
Skin Blood Flow ◽  
Inverse Relationship ◽  
Forearm Blood Flow ◽  
Wave Pattern ◽  
The Body ◽  
Reflex Response ◽  
Neutral Zone ◽  
Human Body Temperature ◽  
Skin Temperatures

In humans, matching of heat loss and heat production in the “neutral” zone, defined operationally in terms of a range of skin temperatures (Tsk), is accomplished by regulation of skin blood flow (SkBF). Our studies were designed to reveal the characteristics of control of SkBF [from measurements of forearm blood flow (FBF)] in this zone. We controlled the temperature of water sprayed on most of the body of supine men and women at 33 or 35 degrees C in a square-wave pattern (15 min at each temperature) or a step pattern (60 min at 33 degrees C separated by short periods at 35 degrees C). FBF followed Tsk (0.5 ml.min-1.degrees C-1). Esophageal temperature changed approximately 0.11 degrees C with each 2 degrees C change in Tsk, falling with Tsk increase and vice versa. Little influence on FBF, < 0.1 ml.min-1.100 ml-1. degrees C-1, was observed when only the forearm was sprayed with 33 and 35 degrees C water. We conclude that SkBF control in the 33-35 degree C range of Tsk is dominated by the feedforward reflex influence of Tsk on SkBF. The reflex response overcompensates for the effect of Tsk on thermal balance in the neutral zone, so that equilibrium core temperature has an inverse relationship to Tsk.

scholarly journals OPPORTUNITIES OF BIOMEDICAL USE OF CARBON NANOTUBES

2014 ◽  
Vol 13 (1) ◽  
pp. 135-144
Author(s):  
I. V. Mitrofanova ◽  
I. V. Milto ◽  
I. V. Suhodolo ◽  
G. Yu. Vasyukov
Keyword(s):  
Carbon Nanotubes ◽  
Chemical Properties ◽  
Tissue Level ◽  
Pathological Process ◽  
The Body ◽  
Therapeutic Effects ◽  
Target Delivery ◽  
Physico Chemical ◽  
Near Future ◽  
Biological And Medical Applications

Nanomaterials  –  materials,  whouse  structure  elements  has  proportions  doesn’t  exceed  100  nm.  In superdispersed state matter acquire new properties. In the last decade, carbon nanotubes become the most popular nanomaterials, that cause attention of representatives of various scientific field. The сarbon nanotubes offer new opportunities for biological and medical applications: imaging at the molecular, cellular and tissue levels, biosensors and electrodes based on carbon nanotubes, target delivery of various substances, radiation and photothermal therapy. The most promising of carbon nanotubes in the context of biomedical applications is their ability to penetrate the various tissues of the body and carry large doses of agents, providing diagnostic and therapeutic effects. Functionalized nanotubes are biodegradable. Other current direction of using carbon nanotubes in medicine and biology is to visualize objects on the molecular, cellular and tissue level. Associated with carbon nanotubes contrasting substances improve the visualization of cells and tissues, which can detected new patterns of development of the pathological process. Due to the vagueness of the question of biocompatibility and cytotoxicity of carbon nanotubes possibility of their practical application is hampered. Before the introduction of carbon nanotubes into practical health care is necessary to provide all the possible consequences of using nanotubes. High rates of properties and development of new nanostructures based on carbon nanotubes in the near future will lead to new advances related to the application and development of new parameters that will determine their properties and effects. In these review attention is paid to the structure, physico-chemical properties of nanotubes, their functionalization, pharmacokinetics and pharmacodynamics and all aspects of using of carbon nanotubes.

scholarly journals Nervous System and Tissue Polarity Dynamically Adapt to New Morphologies in Planaria

2019 ◽  
Author(s):  
Johanna Bischof ◽  
Margot E. Day ◽  
Kelsie A. Miller ◽  
Joshua LaPalme ◽  
Michael Levin
Keyword(s):  
Nervous System ◽  
Planar Cell Polarity ◽  
Tissue Level ◽  
The Body ◽  
Tissue Polarity ◽  
Intact Brain ◽  
Radiation Induced ◽  
The Central Nervous System ◽  
Primary Axis

AbstractThe coordination of tissue-level polarity with organism-level polarity is crucial in development, disease, and regeneration. Exploiting the flexibility of the body plan in regenerating planarians, we used mirror duplication of the primary axis to show how established tissue-level polarity adapts to new organism-level polarity. Tracking of cilia-driven flow to characterize planar cell polarity of the epithelium revealed a remarkable reorientation of tissue polarity in double-headed planarians. This reorientation is driven by signals produced by the intact brain and is not hampered by radiation-induced removal of stem cells. The nervous system itself adapts its polarity to match the new organismal anatomy in these animals as revealed by distinct regenerative outcomes driven by polarized nerve transport. Thus, signals from the central nervous system can dynamically control and re-orient tissue-level polarity to match the organism-level anatomical configuration, illustrating a novel role of the nervous system in the regulation of patterning.

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