Fungal endophytes of some medicinal plant growing in northwestern coast of Egypt: Isolation, identification and two-way clustering analysis of its antimicrobial activity

Abstract One of hidden mine of antibiotics is endophytic fungi especially that inhibited medicinal plants. In this regard, leaves, stems, fruits and bulbs of some commonly medicinal plants growing in Northwestern coast of Egypt were subjected for isolation of endophytic fungi with screening study of its antimicrobial activity. Practically, more than one hundred (101) endophytic fungal species isolated from Scorpiurus muricatus, Mellilotus indicus, Lotus polyphyllos, Ononis vaginalis, Nicotiana glauca, Lycium europaeum, Asphodelus aestivus, Echium angustifolium,Fagonia cretica, Pancratium maritimum,and Carduus getulus were tested in vitro for their antimicrobial activities against E. coli, Pseudomonas argenosa, Staphylococcus aureus, Bacillus subtilus, Candida albicanus, Candida glabrata, Penicillium expansum, Aspergillus flavus. The values of applied diversity indices revealed significant differences in presence, absence and abundance among endophytic fungal isolates. To the best of our knowledge, the present study is the first to report of Alternaria pluriseptata as endophytic species with most dominant and most active in its anitimicrobial activity among the isolated species. Seven distinctive groups were revealed from the two-way cluster analysis showing the intensity of antimicrobial activity against tested pathogens: Twenty-five percent of the isolates (26 strains assembled together in group V) exhibited no antimicrobial activity against all tested pathogens while six percent (6 isolates) assembled in group VII revealed high antimicrobial activity against five pathogens.

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Antimicrobial potential of fungal endophytes from selected high value medicinal plants of the Kashmir valley – India

The Journal of Phytopharmacology ◽

10.31254/phyto.2017.6510 ◽

2017 ◽

Vol 6 (5) ◽

pp. 307-310

Author(s):

Refaz Ahmad Dar ◽

◽

Iram Saba ◽

Shahnawaz ◽

Parvaiz Hassan Qazi ◽

...

Keyword(s):

Antimicrobial Activity ◽

Medicinal Plants ◽

Fungal Endophytes ◽

Gene Sequencing ◽

Antimicrobial Activities ◽

Good Activity ◽

Kashmir Valley ◽

Gram Positive Bacteria ◽

Antimicrobial Potential ◽

Different Parts

The purpose of this work was to evaluate the antimicrobial potential of endophytic fungi isolated from different high value medicinal plants of Kashmir valley. Evaluation of some endophytes has been carried for their possible antimicrobial activity from various parts of medicinal plants belonging to Kashmir valley (India). A total of twenty-eight fungal endophytes were isolated from the different parts of selected medicinal plants. Dichloromethane (DCM) extracts of all the morphologically different endophytes were prepared and subsequently checked for antimicrobial activities. Eight isolates showed good activity against gram positive bacteria with two isolates showing promising activity with MIC in the range of 0.5 – 1µg/ml. All the isolated endophytic extracts were completely devoid of antifungal activity. The seven-active endophytic fungal cultures were identified by ITS4 and ITS5 gene sequencing.

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Isolation, diversity, and antimicrobial activity of fungal endophytes from Rohdea chinensis (Baker) N.Tanaka (synonym Tupistra chinensis Baker) of Qinling Mountains, China

PeerJ ◽

10.7717/peerj.9342 ◽

2020 ◽

Vol 8 ◽

pp. e9342

Author(s):

Chao An ◽

Saijian Ma ◽

Xinwei Shi ◽

Wenjiao Xue ◽

Chen Liu ◽

...

Keyword(s):

Antimicrobial Activity ◽

Liquid Chromatography ◽

Secondary Metabolites ◽

Endophytic Fungi ◽

High Performance ◽

Fungal Endophytes ◽

Folk Medicine ◽

Antimicrobial Activities ◽

Biologically Active ◽

Qinling Mountains

Endophytic fungi have been emerged as fruitful resources for producing structurally fascinating and biologically active secondary metabolites. However, endophytic fungi from medicinal plants of Qinling Mountains–the most important natural climatic boundary between the subtropical and warm temperate zones of China with an astonishingly high level of biodiversity–have rarely been explored as potential sources of novel fungal species and active secondary metabolites. In this study, a total of 371 fungal colonies were successfully isolated from 510 tissue segments of the medicinal Tupistra chinensis Baker collected from Qinling Mountains, China. Roots of T. chinensis Baker are used as a folk medicine to ameliorate pharyngitis and treat rheumatic diseases. A total of 100 representative morphotype strains were identified according to ITS rDNA sequence analyses and were grouped into three phyla (Ascomycota, Basidiomycota, Mucoromycota), seven classes (Dothideomycetes, Sordariomycetes, Eurotiomycetes, Microbotryomycetes, Agaricomycetes, Leotiomycetes, Mortierellomycetes), and at least 35 genera. The genera of Collectotrichum (IF, 29.92%), Fusarium (IF, 8.36%), Aspergillus (IF, 8.09%), and Dactylonectria (IF, 5.39%) were most frequently isolated from the tissues of T. chinensis Baker. The Species Richness Index (S, 65) and the Shannon-Wiener Index (H′, 3.7914) indicated that T. chinensis Baker harbored abundant fungal resources. Moreover, five isolates were potential new taxa because of low similarity of ITS sequences ranged from 95.09%∼96.61%. Fifteen out of 100 endophytic fungal ethyl acetate extracts exhibited inhibitory activities against at least one pathogenic bacterium or fungus. Two important lead compounds produced by two stains (F8047 and F8075) with high antimicrobial activities were identified using high performance liquid chromatography (HPLC) and ultra-performance liquid chromatography-quadrupole-time of flight mass spectrometry (UPLC–QTOF MS) analyses. In addition, it was noteworthy that the strain F8001, which may be a potential new species, showed antimicrobial activity and should be investigated further. Overall, these results indicated that the endophytic fungi from T. chinensis Baker could be exploited as a novel source of bioactive compounds.

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Diversity Estimation and Antimicrobial Activity of Culturable Endophytic Fungi from Litsea cubeba (Lour.) Pers. in China

Forests ◽

10.3390/f10010033 ◽

2019 ◽

Vol 10 (1) ◽

pp. 33 ◽

Cited By ~ 3

Author(s):

Fei Wu ◽

Dingchao Yang ◽

Linping Zhang ◽

Yanliu Chen ◽

Xiaokang Hu ◽

...

Keyword(s):

Antimicrobial Activity ◽

Endophytic Fungi ◽

Forest Ecosystems ◽

Fungal Endophytes ◽

Pathogenic Fungi ◽

Antimicrobial Activities ◽

Plant Pathogenic Fungi ◽

Litsea Cubeba ◽

Stem Leaf ◽

Potential Use

Endophytes are important components of forest ecosystems, and have potential use in the development of medical drugs and the conservation of wild medicinal plants. This study aimed to examine the diversity and antimicrobial activities of endophytic fungi from a medicinal plant, Litsea cubeba (Lour.) Pers. The results showed that a total of 970 isolates were obtained from root, stem, leaf, and fruit segments of L. cubeba. All the fungal endophytes belonged to the phylum Ascomycota and could be classified into three taxonomic classes, nine orders, twelve families, and seventeen genera. SF15 (Colletotrichum boninense) was the dominant species in L. cubeba. Leaves harbored a greater number of fungal endophytes but lower diversity, while roots harbored the maximum species diversity of endophytic fungi. For the antimicrobial activities, seventeen isolates could inhibit the growth of plant pathogenic fungi, while the extracts of six endophytes showed antimicrobial activity to all the tested pathogenic fungi. Among these endophytes, SF22 (Chaetomium globosum) and SF14 (Penicillium minioluteum) were particularly effective in inhibiting seven plant pathogenic fungi growths and could be further explored for their potential use in biotechnology, medicine, and agriculture.

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In vitro- exploration of Fungal Endophytes of Egyptian Cynara scolymus L. (artichoke) and Investigation of some their bioactive potentials

Global NEST Journal ◽

10.30955/gnj.002836 ◽

2018 ◽

Keyword(s):

Endophytic Fungi ◽

Biological Activities ◽

Fungal Endophytes ◽

Diversity Indices ◽

Fungal Species ◽

Biologically Active ◽

Bioactive Metabolites ◽

Total Phenolic ◽

Dicaffeoylquinic Acid

Plant-associated microorganisms, especially endophytic fungi, represent an untapped resource for the discovery of biologically active natural products. The objectives of this study were to isolate, identify endophytic fungi, and produce their bioactive metabolites from the leaves of two varieties of Egyptian artichoke namely: French Hyrious and Egyptian Baladi. In addition, assess of their total antioxidant capacity (TAC), total phenolic content (TPC) and total flavonoid content (TFC). The results of this novel study show a total of 35 endophytic fungal species belonging to 14 genera were isolated from both artichoke leaves with gross total counts of colonizing endophytic fungi ranged from 71 to 123 cfu which is matching 78.89% to 136.67% of colonization frequency. All taxa recovered were assigned to Ascomycetes. In addition, there is high species richness and diversity indices of endophytic filamentous fungi in the leaves Baladi Artichoke as compared to its French rival.  Alternaria alternata were found to be the most frequently isolated dominant species. The TAC, TPC and TFC of the fungal cultures ranged from 163 to 681 mgAAE/gDW, 10.38 to 40.30 mgGAE/ gDW, and 13.92 to 173.55 mgQE/gDW, respectively. Furthermore, LC-ESI-MS/MS conﬁrmed the presence of 1,3-dicaffeoylquinic acid and 1,5-dicaffeoylquinic acid in the methanolic extract of A. alternata. Hence, this novel study suggested that the metabolites produced by endophytic fungi associated with Egyptian artichoke could be explored as an economic and potential natural resources with diverse pharmaceutical and biological activities.

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The in-vitro antimicrobial activity of some medicinal plants against β-lactam-resistant bacteria

The Journal of Infection in Developing Countries ◽

10.3855/jidc.77 ◽

2009 ◽

Vol 3 (09) ◽

pp. 671-680 ◽

Cited By ~ 22

Author(s):

Joseph Gangoue-Pieboji ◽

Noelly Eze ◽

Arnaud Ngongang Djintchui ◽

Bathélémy Ngameni ◽

Nolé Tsabang ◽

...

Keyword(s):

Antimicrobial Activity ◽

Medicinal Plants ◽

Plant Extracts ◽

Klebsiella Oxytoca ◽

Antimicrobial Activities ◽

Resistant Bacteria ◽

Beta Lactam ◽

Gram Negative ◽

Garcinia Kola

Background: In effort to identify novel bacterial agents, this study was initiated to evaluate the antimicrobial properties of 17 crude extracts from 12 medicinal plants against beta-lactam-resistant bacteria. Methodology: The antimicrobial activities of plant extracts were evaluated against clinically proved beta-lactam-resistant bacteria (Klebsiella pneumoniae, Klebsiella oxytoca, Enterobacter cloacae, Serratia marcescens, Acinetobacter baumannii, Staphylococcus aureus and Enterococcus sp.) and reference strains of bacteria (Escherichia coli ATCC 35218, Enterobacter aerogenes ATCC 29751, E. aerogenes ATCC 13048, Pseudomonas aeruginosa ATCC 27853 and Enterococcus hirae ATCC 9790) by using disc-diffusion and agar-dilution assays. Results: The crude plant extracts demonstrated broad spectrum activity against all bacteria tested with inhibition zones in the range of 8-30 mm. The minimal inhibitory concentration (MIC) values of different plant extracts against the tested bacteria were found to range from ≤ 0.3 to ≥ 10 mg ml-1. The most active plant extracts were from Dortenia picta and Bridelia micrantha (MIC: 1.25-10 mg ml-1) on beta-lactam-resistant Gram-negative bacilli and the extracts from B. micrantha, Mallotus oppositifolius, Garcinia lucida, Garcinia. kola, Campylospermum densiflorum (leaves) and C. zenkeri (root) on beta-lactam-resistant Gram-positive cocci (MIC: ≤ 0.3-5 mg ml-1). Conclusion: Of the 17 plant extracts studied, seven showed good antimicrobial activity against the tested bacteria. The stem bark of B. micrantha and the leaves of D. picta were most active towards beta-lactamase producing Gram-negative bacilli. This study shows that medicinal plants could be sources of compounds which can be used to fight against beta-lactam resistant bacteria.

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Synthesis of Novel 3(N,N-dialkylamino)alkyl/phenyl Substituted Thieno [2,3-d]pyrimidinones as H1-Anti-Histaminic and Antimicrobial Agents

Current Bioactive Compounds ◽

10.2174/1573407214666180226130957 ◽

2019 ◽

Vol 15 (1) ◽

pp. 63-70

Author(s):

Shiv Dev Singh ◽

Arvind Kumar ◽

Firoz Babar ◽

Neetu Sachan ◽

Arun Kumar Sharma

Keyword(s):

Antimicrobial Activity ◽

Potassium Hydroxide ◽

Antimicrobial Agents ◽

Pyrimidine Ring ◽

Antimicrobial Activities ◽

Screening Methods ◽

Chlorpheniramine Maleate ◽

In Vivo Screening

Background: Thienopyrimidines are the bioisoster of quinazoline and unlike quinazoline exist in three isomeric forms corresponding to the three possible types annulation of thiophene to the pyrimidine ring viz thieno[2,3-d] pyrimidine, thieno[3,2-d] pyrimidine and thieno[3,4-d]pyrimidine. Heterocyclic containing the thienopyrimidinone moiety exhibits various pronounced activities such as anti-hypertensive, analgesic and anti-inflammatory, antiviral, platelet aggregation inhibitory, antiprotozoal bronchodilatory, phosphodiesterase inhibitory, antihistaminic, antipsychotic and antimicrobial activity. Objective: Synthesis of novel 3(N,N-dialkylamino)alkyl/phenyl substituted thieno[2,3-d]pyrimidinones as H1-anti-histaminic and antimicrobial agents. Methods: A series of 3-[(N,N-dialkylamino)alkyl/phenyl]-2-(1H)thioxo-5,6,7,8-tetrahydrobenzo(b) thieno(2,3-d)pyrimidine-4(3H)-ones[4a-d], their oxo analogous [5a-d] and 3-[(N,N-dialkylamino)alkyl]- 2-chlorophenyl-5,6,7,8-tetrahydrobenzo(b)thieno(2,3-d)pyrimidine- 4 (3H)-ones[6a-d]derivative were synthesized from 2-amino-4,5,6,7-tetrahydrobenzo(b)thiophene-3-carboxylic acid by nucleophilic substitution of different N,N-dialkyl alkylene/phenylene diamines on activated 3-acylchloride moiety followed by cyclocondensation with carbon disulfide and ethanolic potassium hydroxide to get [4a-d] and in second reaction by condensation with 4-chlorobenzoyl chloride to get [6a-d] by single pot novel innovative route. The oxo analogous [5a-d] were prepared by treating derivatives [4a-d] with potassium permagnate in ethanolic KOH. The synthesized compound were evaluated for H1-antihistaminic and antimicrobial activities. Results: All synthesized compounds exhibited significant H1-antihistaminic activity by in vitro and in vivo screening methods and data were verified analytically and statistically. The compound 4a, 4b, 5a and 5b showed significant H1-antihistaminiic activity than the reference standard chlorpheniramine maleate. The compound 6d, 6c, 5c and 4c exhibited significant antimicrobial activity.

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Isolation and Characterization of Fungal Endophytes Isolated from Medicinal Plant Ephedra pachyclada as Plant Growth-Promoting

Biomolecules ◽

10.3390/biom11020140 ◽

2021 ◽

Vol 11 (2) ◽

pp. 140 ◽

Cited By ~ 2

Author(s):

Ahmed Mohamed Aly Khalil ◽

Saad El-Din Hassan ◽

Sultan M. Alsharif ◽

Ahmed M. Eid ◽

Emad El-Din Ewais ◽

...

Keyword(s):

Medicinal Plants ◽

Plant Growth ◽

Aspergillus Flavus ◽

Endophytic Fungi ◽

Fungal Endophytes ◽

Penicillium Crustosum ◽

Plant Growth Promoting ◽

Penicillium Commune ◽

Maize Plants ◽

Growth Promoting

Endophytic fungi are widely present in internal plant tissues and provide different benefits to their host. Medicinal plants have unexplored diversity of functional fungal association; therefore, this study aimed to isolate endophytic fungi associated with leaves of medicinal plants Ephedra pachyclada and evaluate their plant growth-promoting properties. Fifteen isolated fungal endophytes belonging to Ascomycota, with three different genera, Penicillium, Alternaria, and Aspergillus, were obtained from healthy leaves of E. pachyclada. These fungal endophytes have varied antimicrobial activity against human pathogenic microbes and produce ammonia and indole acetic acid (IAA), in addition to their enzymatic activity. The results showed that Penicillium commune EP-5 had a maximum IAA productivity of 192.1 ± 4.04 µg mL−1 in the presence of 5 µg mL−1 tryptophan. The fungal isolates of Penicillium crustosum EP-2, Penicillium chrysogenum EP-3, and Aspergillus flavus EP-14 exhibited variable efficiency for solubilizing phosphate salts. Five representative fungal endophytes of Penicillium crustosum EP-2, Penicillium commune EP-5, Penicillium caseifulvum EP-11, Alternaria tenuissima EP-13, and Aspergillus flavus EP-14 and their consortium were selected and applied as bioinoculant to maize plants. The results showed that Penicillium commune EP-5 increased root lengths from 15.8 ± 0.8 to 22.1 ± 0.6. Moreover, the vegetative growth features of inoculated maize plants improved more than the uninoculated ones.

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The Influence of the Grapevine Bacterial and Fungal Endophytes on Biomass Accumulation and Stilbene Production by the In Vitro Cultivated Cells of Vitis amurensis Rupr.

Plants ◽

10.3390/plants10071276 ◽

2021 ◽

Vol 10 (7) ◽

pp. 1276

Author(s):

Olga A. Aleynova ◽

Andrey R. Suprun ◽

Nikolay N. Nityagovsky ◽

Alexandra S. Dubrovina ◽

Konstantin V. Kiselev

Keyword(s):

Cell Culture ◽

Cell Suspension ◽

Endophytic Fungi ◽

Endophytic Bacteria ◽

Fungal Endophytes ◽

Biomass Accumulation ◽

Vitis Amurensis ◽

Grape Cell ◽

Stilbene Biosynthesis

Plant endophytes are known to alter the profile of secondary metabolites in plant hosts. In this study, we identified the main bacterial and fungal representatives of the wild grape Vitis amurensis Rupr. microbiome and investigated a cocultivation effect of the 14 endophytes and the V. amurensis cell suspension on biomass accumulation and stilbene biosynthesis. The cocultivation of the V. amurensis cell culture with the bacteria Agrobacterium sp., Bacillus sp., and Curtobacterium sp. for 2 weeks did not significantly affect the accumulation of cell culture fresh biomass. However, it was significantly inhibited by the bacteria Erwinia sp., Pantoea sp., Pseudomonas sp., and Xanthomonas sp. and fungi Alternaria sp., Biscogniauxia sp., Cladosporium sp., Didymella sp. 2, and Fusarium sp. Cocultivation of the grapevine cell suspension with the fungi Didymella sp. 1 and Trichoderma sp. resulted in cell death. The addition of endophytic bacteria increased the total stilbene content by 2.2–5.3 times, while the addition of endophytic fungi was more effective in inducing stilbene accumulation by 2.6–16.3 times. The highest content of stilbenes in the grapevine cells cocultured with endophytic fungi was 13.63 and 13.76 mg/g of the cell dry weight (DW) after cultivation with Biscogniauxia sp. and Didymella sp. 2, respectively. The highest content of stilbenes in the grapevine cells cocultured with endophytic bacteria was 4.49 mg/g DW after cultivation with Xanthomonas sp. The increase in stilbene production was due to a significant activation of phenylalanine ammonia lyase (PAL) and stilbene synthase (STS) gene expression. We also analyzed the sensitivity of the selected endophytes to eight antibiotics, fluconazole, and trans-resveratrol. The endophytic bacteria were sensitive to gentamicin and kanamycin, while all selected fungal strains were resistant to fluconazole with the exception of Cladosporium sp. All endophytes were tolerant of trans-resveratrol. This study showed that grape endophytes stimulate the production of stilbenes in grape cell suspension, which could further contribute to the generation of a new stimulator of stilbene biosynthesis in grapevine or grape cell cultures.

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In vitro Antimicrobial Activity of Tropical Medicinal Plants used in Santo Domingo, Dominican Republic: Part 2

Pharmacognosy Communications ◽

10.5530/pc.2021.1.11 ◽

2021 ◽

Vol 11 (1) ◽

pp. 52-60

Author(s):

Cesar Manuel Lozano ◽

Manuel Antonio Vasquez Tineo ◽

Maritza Ramirez ◽

Maria Isabel Infante

Keyword(s):

Antimicrobial Activity ◽

Medicinal Plants ◽

Dominican Republic ◽

Santo Domingo ◽

In Vitro Antimicrobial Activity

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Isolation and antimicrobial effects of endophytic fungi from Edgeworthia chrysantha

Bangladesh Journal of Pharmacology ◽

10.3329/bjp.v10i3.23575 ◽

2015 ◽

Vol 10 (3) ◽

pp. 529 ◽

Cited By ~ 4

Author(s):

Huawei Zhang ◽

Chuanfeng Ruan ◽

Xuelian Bai

Keyword(s):

Ethyl Acetate ◽

Endophytic Fungi ◽

Fermentation Broth ◽

Fungal Endophytes ◽

Antimicrobial Effect ◽

Antibacterial Activities ◽

Antimicrobial Activities ◽

Human Pathogens ◽

Antimicrobial Effects ◽

Staphyloccocus Aureus

Ten fungal strains isolated from Edgeworthia chrysantha, one of traditional medicinal plants in China, were evaluated their antimicrobial activities against three human pathogens, Escherichia coli, Staphyloccocus aureus and Candida albicans, and two phytopathogens, Rhizoctonia cerealis and Colletotrichum gloeosporioides. The results indicated that most ethyl acetate extracts of fermentation broth of these fungal endophytes had stronger antimicrobial activities than their fermentation broth. Among these endophytic strains, both fermentation broth and the ethyl acetate extract of strain D showed the strongest inhibitory effects on all pathogens. Strains 5-19 and BZ also exhibited potent antibacterial activities. However, other strains had weak or no antimicrobial effect. This was the first report on the isolation and antimicrobial effects of endophytic fungi from E. chrysantha.

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