scholarly journals Isozyme and Morphological Variation in a Cornus florida L. Provenance Plantation Representing Geographically Diverse Populations

1996 ◽  
Vol 121 (2) ◽  
pp. 225-230 ◽  
Author(s):  
Alexander Fernandez ◽  
Robert E. Schutzki ◽  
James F. Hancock

Starch gel electrophoresis and principal component (PC) analysis were used to determine the levels of genetic variation and the relationship between morphology and geographic origin for Cornus florida (flowering dogwood) populations in a Michigan provenance plantation. The populations are representative of the species' geographic distribution, ranging from Texas to Georgia and north to Connecticut and Michigan. Allelic variation at 11 loci encoded by 5 enzymes was very low in comparison to other plant species. On average, populations displayed 1.16 alleles per locus, 9.89% of loci polymorphic, with an observed heterozygosity value of 0.048. Genetic identify values ranged from 0.961 to 1.00 and displayed no relationship with geographic origin. While the isozyme analysis revealed little genetic variation, the PC analysis revealed a considerable amount of morphological variation. Most variation (83.3%) in leaf and flower bud morphology was explained by three PCs. Leaf characters revealed no relationship with geographic origin. However, flower bud size and number of florets decreased with changes in latitude from northern, central, and southern populations, respectively. The relationship between flower bud size and latitude suggests an adaptive response to photoperiod throughout the species' geographic range.

HortScience ◽  
1998 ◽  
Vol 33 (3) ◽  
pp. 534e-534 ◽  
Author(s):  
J. Staub ◽  
Felix Sequen ◽  
Tom Horejsi ◽  
Jin Feng Chen

Genetic variation in cucumber accessions from China was assessed by examining variation at 21 polymorphic isozyme loci. Principal component analysis of allelic variation allowed for the depiction of two distinct groupings of Chinese accessions collected in 1994 and 1996 (67 accessions). Six isozyme loci (Gpi, Gr, Mdh-2, Mpi-2, Pep-gl, and Pep-la) were important in elucidating these major groups. These groupings were different from a single grouping of Chinese 146 accessions acquired before 1994. Allelic variation in Chinese accessions allowed for comparisons with other accessions in the U.S. National Plant Germplasm System (U.S. NPGS) collection grouped by continent and sub-continent. When Chinese accessions taken collectively were compared with an array of 853 C. sativus U.S. NPGS accessions examined previously, relationships differed between accessions grouped by country or subcontinent. Data indicate that acquisition of additional Chinese and Indian cucumber accessions would be strategically important for increasing genetic diversity in the U.S. NPGS cucumber collection.


1972 ◽  
Vol 20 (1) ◽  
pp. 19-42 ◽  
Author(s):  
Francisco J. Ayala ◽  
Jeffrey R. Powell ◽  
Martin L. Tracey

SUMMARYWe have studied genetic variation at 27 loci in 42 samples from natural populations of a neotropical species, Drosophila equinoxialis, using standard techniques of starch-gel electrophoresis to detect allelic variation in genes coding for enzymes. There is considerarle genetic variability in D. equinoxialis. We have found allelic variation in each of the 27 loci, although not in every population. On the average, 71% of the loci are polymorphic – that is, the most common allele has a frequency no greater than 0·95 – in a given population. An individual is heterozygous on the average at 21·8% of its loci.The amount of genetic variation fluctuates widely from locus to locus. At the Mdh-2 locus arout 1% of the individuals are heterozygotes; at the other extreme more than 56% of the individuals are heterozygous at the Est-3. At any given locus the configuration of allelic frequencies is strikingly similar from locality to locality. At each and every locus the same allele is generally the most common throughout the distribution of the species. Yet differences in gene frequencies occur between localities. The pattern of genetic variation is incompatible with the hypothesis that the variation is adaptively neutral. Genetic variation in D. equinoxialis is maintained by balancing natural selection.The amount and pattern of genetic variation is similar in D. equinoxialis and its sibling species, D. willistoni. Yet the two species are genetically very different. Different sets of alleles occur at nearly 40% of the loci.


2004 ◽  
Vol 129 (5) ◽  
pp. 675-681 ◽  
Author(s):  
H.M. Mathers

Flower buds of two sweet cherry (Prunus avium L.), 12 sour cherry (Prunus cerasus L.) and one ground cherry (P. fruticosa Pall.) were collected monthly from Aug. 1990 to Mar. 1991, and subjected to freeze tests to determine the level of cold hardiness. LT50 values (temperatures at which 50% of the flower buds were killed) summed over all months were significantly correlated (r = 0.6844, P ≤ 0.01) to the flower bud low temperature exotherms (LTEs). Correlation of LTEs to LT50 values was highest, r = 0.85, P ≤ 0.01 for the acclimation and midwinter period, November to February collections. During this period the average LT50 occurred before and within 2.5 °C of the LTE, indicating tissue injury before the LTE occurrence. During deacclimation, represented by the March collection, the LT50 began within 2.0 °C, on average, of the LTE, and in 11 of 12 cultivars and seedlings preceded the LTE. In March, the correlation of LTEs to LT50 values was less, r = 0.69, P ≤ 0.05, indicating possible changes flower bud deep supercooling. LTE values were selected as a measure of flower bud hardiness in sour cherry. Exotherms were not detected in the flower buds of all germplasm tested on all evaluation dates, but were the best means of separating selections. While LTE analyses expressed significant differences in November, December, and March at P ≤ 0.01, the LT50 analyses expressed differences only in December and February at P ≤ 0.05. The relationship between ambient temperatures and floral tissue hardiness indicated that November and March are two critical times for flower bud injury. November injury would occur in years when sudden low temperatures occur without sufficient pre-exposure to freezing temperatures. March injury would occur in years when sudden freezing temperatures follow warm days. This type of injury would be most pronounced in southern genotypes. Spring freeze injury could be significantly reduced by the selection of cultivars and seedlings that have delayed deacclimation. Exotherm occurrence and bud volume were correlated (r = 0.95, P ≤ 0.05). In January, when exotherms were least prevalent, they were generally present only in the five cultivars and seedlings with large bud volumes. The LTEs in midwinter, occurred within 3 °C of the reported average annual minimum temperature for the northern range of Prunus commercial production (Zone 6). The results of the principal component analysis of flower bud LTEs indicated that other selection criteria as flowering time might have played a more significant role in the hardiness range of sour cherry than simply geographic origin. The first principal component (PC1), which accounted for 77% of the total variance was used to separate among cultivars and seedlings. Selections at the positive end of PC1 had flower buds that were more cold susceptible than selections at the negative end of PC. This concurs with other research showing that flower bud hardiness is related more to commercial range (i.e., the range of commercial production) than to geographic distribution.


2021 ◽  
Vol 7 (10) ◽  
pp. 820
Author(s):  
Gezahegne Getaneh ◽  
Tadele Tefera ◽  
Fikre Lemessa ◽  
Seid Ahmed ◽  
Tarekegn Fite ◽  
...  

Ascochyta blight, also known as chickpea blight, which is caused by the fungal pathogen, Didymella rabiei, is an important disease affecting chickpea (Cicer arietinum L.) in many countries. We studied the genetic diversity and population structure of 96 D. rabiei isolates collected from three geographic populations in Ethiopia using simple sequence repeat (SSR) markers. We confirmed the genetic identity of 89 of the D. rabiei isolates by sequencing their rRNA internal transcribed spacer region genes. The chickpea blight pathogen isolates were genetically diverse, with a total of 51 alleles identified across 6 polymorphic SSR loci, which varied from 3 to 18 (average 8.5) alleles per SSR marker. The observed heterozygosity and expected heterozygosity ranged from 0.01 to 0.92 and 0.19 to 0.86, respectively. The mean polymorphic information content value of the D. rabiei populations was 0.58, with a mean gene diversity of 0.61 among loci. Gene flow (Nm = number of migrants) for the three populations of D. rabiei isolates ranged from 1.51 to 24.10 (average 6.2) migrants/cluster. However, the genetic variation between the D. rabiei populations was small (8%), with most of the variation occurring within populations (92%). Principal component analysis to visualize genetic variation showed that the D. rabiei isolates obtained from most of the chickpea samples formed roughly three groups on a two-dimensional coordinate plane. Similarly, the clustering of individuals into populations based on multi-locus genotypes (using Clumpak) grouped isolates into three clusters but with individual isolate admixtures. Hence, no clear geographic origin-based structuring of populations could be identified. To our knowledge, this is the first report of D. rabiei diversity in Ethiopia. Virulence studies should be conducted to develop chickpea varieties that are resistant to more aggressive pathogen populations.


2012 ◽  
Vol 34 (3) ◽  
pp. 686-694 ◽  
Author(s):  
Rafael Hansen Madail ◽  
Flávio Gilberto Herter ◽  
Gabriel Berenhauser Leite

This study examines the relationship between floral structure and bud quality with the productivity and fruit shape of Gala, Fuji and Daiane apple cultivars under the mild winter conditions in Southern Brazil. Six different types of floral structures were characterized in field growing plants, according to their nature and bud size: spurs, short and long twigs with weak and vigorous buds. Variables related to the phenology and the productivity for these different structures were evaluated. Gala and Fuji cvs. showed earlier phenological development in the twigs, and cv. Daiane in the spurs. For the three cvs. the highest percentage of buds in each phenological phase was observed in the long twigs. The long twigs also showed the highest sprout and fruit set index, floral number per cluster, and leaf area in the three cvs., while the bud abortion was higher in the spurs than in the twigs. No difference was observed among the structures in cvs. Gala and Fuji regarding to the fruit shape. In the cv. Daiane, however, a tendency to higher length diameter ratio of the fruits produced by the long twigs was observed.


2003 ◽  
Vol 8 (2) ◽  
pp. 97-100 ◽  
Author(s):  
Maria José Sotelo ◽  
Luis Gimeno

The authors explore an alternative way of analyzing the relationship between human development and individualism. The method is based on the first principal component of Hofstede's individualism index in the Human Development Index rating domain. Results suggest that the general idea that greater wealth brings more individualism is only true for countries with high levels of development, while for middle or low levels of development the inverse is true.


2020 ◽  
Vol 13 (2) ◽  
pp. 112-121
Author(s):  
Sudiyar . ◽  
Okto Supratman ◽  
Indra Ambalika Syari

The destructive fishing feared will give a negative impact on the survival of this organism. This study aims to analyze the density of bivalves, distribution patterns, and to analyze the relationship of bivalves with environmental parameters in Tanjung Pura village. This research was conducted in March 2019. The systematic random system method was used for collecting data of bivalves. The collecting Data retrieval divided into five research stasions. The results obtained 6 types of bivalves from 3 families and the total is 115 individuals. The highest bivalve density is 4.56 ind / m², and the lowest bivalves are located at station 2,1.56 ind / m²,  The pattern of bivalve distribution in the Coastal of Tanjung Pura Village is grouping. The results of principal component analysis (PCA) showed that Anadara granosa species was positively correlated with TSS r = 0.890, Dosinia contusa, Anomalocardia squamosa, Mererix meretrix, Placamen isabellina, and Tellinella spengleri were positively correlated with currents r = 0.933.


2021 ◽  
Vol 11 (3) ◽  
pp. 359
Author(s):  
Katharina Hogrefe ◽  
Georg Goldenberg ◽  
Ralf Glindemann ◽  
Madleen Klonowski ◽  
Wolfram Ziegler

Assessment of semantic processing capacities often relies on verbal tasks which are, however, sensitive to impairments at several language processing levels. Especially for persons with aphasia there is a strong need for a tool that measures semantic processing skills independent of verbal abilities. Furthermore, in order to assess a patient’s potential for using alternative means of communication in cases of severe aphasia, semantic processing should be assessed in different nonverbal conditions. The Nonverbal Semantics Test (NVST) is a tool that captures semantic processing capacities through three tasks—Semantic Sorting, Drawing, and Pantomime. The main aim of the current study was to investigate the relationship between the NVST and measures of standard neurolinguistic assessment. Fifty-one persons with aphasia caused by left hemisphere brain damage were administered the NVST as well as the Aachen Aphasia Test (AAT). A principal component analysis (PCA) was conducted across all AAT and NVST subtests. The analysis resulted in a two-factor model that captured 69% of the variance of the original data, with all linguistic tasks loading high on one factor and the NVST subtests loading high on the other. These findings suggest that nonverbal tasks assessing semantic processing capacities should be administered alongside standard neurolinguistic aphasia tests.


Agriculture ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 327
Author(s):  
Salvatore La Bella ◽  
Francesco Rossini ◽  
Mario Licata ◽  
Giuseppe Virga ◽  
Roberto Ruggeri ◽  
...  

The caper plant is widespread in Sicily (Italy) both wild in natural habitats and as specialized crops, showing considerable morphological variation. However, although contributing to a thriving market, innovation in caper cropping is low. The aim of the study was to evaluate agronomic and production behavior of some biotypes of Capparis spinosa L. subsp. rupestris, identified on the Island of Linosa (Italy) for growing purposes. Two years and seven biotypes of the species were tested in a randomized complete block design. The main morphological and production parameters were determined. Phenological stages were also observed. Analysis of variance showed high variability between the biotypes. Principal component analysis and cluster analysis highlighted a clear distinction between biotypes based on biometric and production characteristics. Production data collected in the two-year period 2007–2008 showed the greatest production levels in the third year following planting in 2005. In particular, biotype SCP1 had the highest average value (975.47 g) of flower bud consistency. Our results permitted the identification of biotypes of interest for the introduction into new caper fields. Further research is needed in order to characterize caper biotypes in terms of the chemical composition of the flower buds and fruits.


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