scholarly journals Biometrics Assessment of Cluster- and Berry-Related Traits of Muscadine Grape Population

Plants ◽  
2021 ◽  
Vol 10 (6) ◽  
pp. 1067
Author(s):  
Jiovan Campbell ◽  
Ali Sarkhosh ◽  
Fariborz Habibi ◽  
Ahmed Ismail ◽  
Pranavkumar Gajjar ◽  
...  
Keyword(s):  
Population Level ◽  
Female Flower ◽  
Distribution Patterns ◽  
Distribution Analysis ◽  
Market Demand ◽  
Flower Structure ◽  
Wine Production ◽  
Breeding Programs ◽  
Breeding Lines ◽  
Muscadine Grape

In this study, biometrics assessment of flower structure, cluster-, and berry-related traits were evaluated in a population of 90 muscadine grape genotypes for three consecutive years. This population consisted of 21 standard cultivars, 60 breeding lines, and 9 Vitis x Muscadinia hybrids (VM hybrids). Cluster length (CL) and width (CWI) characteristics exhibited slight differences among the population, with a range estimated at 7.1 and 4.6 cm, respectively. However, cluster weight (CWE), number of berries/cluster (N.B/C), and cluster compactness (CC) traits showed more diversity between individuals with a calculated range of 205.6 g, 32.6 B/C, and 24.1, respectively. Interestingly, all berry-related traits greatly varied between individuals, excluding the number of seeds/berry (N.S/B) character. The N.S/B trait displayed a narrow range of 5.6 seeds within the population. However, characters of berry length (BL), width (BWI), weight (BWE), the weight of seeds/berry (W.S/B), firmness (FF), and dry scar pattern (SP) demonstrated a wide estimated range of 21.2 mm, 21.7 mm, 25.4 g, 0.71 g, 0.21 N, and 82%, respectively. Normal distribution analysis for each trait suggested different distribution patterns extended between unimodal to multimodal behavior. Hierarchical mapping analysis was able to classify the population into several clades based on physical cluster- and berry-related attributes. The PCA suggested that hermaphroditic (perfect) flower structure is associated with compact clusters exhibiting small berries in size and weight (i.e., muscadine genotypes suitable for wine production). However, female flower structure is associated with clusters displaying large berries in size and weight (i.e., muscadine genotypes appropriate for fresh consumption). These patterns occurred independently of cluster size and weight characters. This research is the first study evaluating muscadine biometrics characters at a population level, providing valuable information for market demand and muscadine breeding programs.

scholarly journals Cysteine-Free Proteins in the Immunobiology of Arthropod-Borne Diseases

2010 ◽  
Vol 2010 ◽  
pp. 1-10 ◽  
Author(s):  
J. Santiago Mejia ◽  
Erik N. Arthun ◽  
Richard G. Titus
Keyword(s):  
Plasmodium Falciparum ◽  
Amino Acid ◽  
Distribution Patterns ◽  
Structural Features ◽  
Structure And Function ◽  
Cysteine Residues ◽  
Distribution Analysis ◽  
And Function ◽  
Abundance And Distribution ◽  
Host Parasite

One approach to identify epitopes that could be used in the design of vaccines to control several arthropod-borne diseases simultaneously is to look for common structural features in the secretome of the pathogens that cause them. Using a novel bioinformatics technique, cysteine-abundance and distribution analysis, we found that many different proteins secreted by several arthropod-borne pathogens, includingPlasmodium falciparum, Borrelia burgdorferi, and eight species of Proteobacteria, are devoid of cysteine residues. The identification of three cysteine-abundance and distribution patterns in several families of proteins secreted by pathogenic and nonpathogenic Proteobacteria, and not found when the amino acid analyzed was tryptophan, provides evidence of forces restricting the content of cysteine residues in microbial proteins during evolution. We discuss these findings in the context of protein structure and function, antigenicity and immunogenicity, and host-parasite relationships.

scholarly journals Determination of Fertility-Related Traits in Muscadine Grape Population

Plants ◽  
2021 ◽  
Vol 10 (6) ◽  
pp. 1175
Author(s):  
Jiovan Campbell ◽  
Pranavkumar Gajjar ◽  
Ahmed Ismail ◽  
Fariborz Habibi ◽  
Ahmed G. Darwish ◽  
...  
Keyword(s):  
Fruit Set ◽  
The Other ◽  
Average Yield ◽  
Number Of Clusters ◽  
Breeding Lines ◽  
Muscadine Grape

In this study, fertility-related traits of 90 muscadine grape genotypes were evaluated. Selected genotypes included 21 standard cultivars, 60 breeding lines, and nine Vitis × Muscadinia hybrids (VM hybrids). The first fruiting bud (FFB), bud fertility (BF), bud fertility coefficient (BFC), number of flowers/flower cluster (N.F/FC), fruit-set efficiency (FSE), number of clusters/vine (N.C/V), and yield/vine (Y/V) traits were evaluated. The FFB trait did not show significant differences among genotypes. The muscadine genotype O28-4-2-2 (1.6 ± 0.2) displayed the FFB closest to the base; however, O17-16-2-1, O18-2-1, and VM A12-10-2 genotypes had the most distant FFB (3.6 ± 0.3). All the other fertility-related traits varied widely among the population. The BF, BFC, N.F/FC, FSE, N.C/V, and Y/V exhibited a range estimated at 35.1%, 81.5%, 259.7, 63.3%, 177 C/V, and 22.3 kg/V, respectively. The muscadine genotypes O42-3-1 (36.7% ± 1.3) and Majesty (34% ± 1.2) exhibited the highest BF; however, the VM A12-10-2 (1.6% ± 0.1) recorded the lowest BF. The VM genotype O15-16-1 (82.8% ± 4.1) displayed the highest BFC; however, the VM A12-10-2 (1.3% ± 0.1) showed the lowest BFC. The muscadine genotypes D7-1-1 (280.3 F/FC ± 21.7) and O17-17-1 (20.7 F/FC ± 5.5) showed the highest and lowest N.F/FC, respectively. The maximum and minimum FSE was observed for the Rosa cultivar (65.7% ± 2.4) and muscadine genotype D7-1-1 (2.4% ± 0.2), respectively. The minimum N.C/V was recorded for VM genotype A12-10-2 (6 C/V ± 0.2) and maximum noted for muscadine genotypes B20-18-2 (183 C/V ± 7.5) and O44-14-1 (176 C/V ± 7.3). Muscadine genotype O23-11-2 (22.6 kg ± 1.1) produced the highest Y/V; however, the lowest yield was recorded for O15-17-1, Fry Seedless, Sugargate, and the VM genotypes and A12-10-2, with an average yield among them estimated at 0.4 kg ± 0.2.

Response of Early, Medium, and Late Maturing Peanut Breeding Lines to Field Epidemics of Tomato Spotted Wilt

1999 ◽  
Vol 26 (2) ◽  
pp. 100-106 ◽  
Author(s):  
A. K. Culbreath ◽  
J. W. Todd ◽  
D. W. Gorbet ◽  
S. L. Brown ◽  
J. A. Baldwin ◽  
...  
Keyword(s):  
High Oleic Acid ◽  
Breeding Programs ◽  
Breeding Lines ◽  
High Oleic ◽  
Tomato Spotted Wilt ◽  
Arachis Hypogaea L ◽  
Early Maturing ◽  
Late Maturity ◽  
Field Plots ◽  
Maturity Groups

Abstract Epidemics of tomato spotted wilt, caused by tomato spotted wilt Tospovirus (TSWV), were monitored in field plots of runner-type peanut (Arachis hypogaea L.) cultivars Georgia Green and Georgia Runner and numerous breeding lines from four different breeding programs as part of efforts toward characterizing breeding lines with potential for release as cultivars. Breeding lines were divided into early, medium and late maturity groups. The tests were conducted near Attapulgus, GA and Marianna, FL in 1997 and in Tifton, GA and Marianna, FL in 1998. Epidemics in some early and medium maturing breeding lines, including some genotypes with high oleic acid oil chemistry, were comparable to those in Georgia Green, the cultivar most frequently used in the southeastern U.S. for suppression of spotted wilt epidemics. No early maturing breeding lines had lower spotted wilt final intensity ratings or higher yields than Georgia Green. However, spotted wilt intensity ratings in some late maturing lines and a smaller number of medium maturing lines were significantly lower than those of Georgia Green. Several of those lines also produced greater pod yields than Georgia Green. Results from these experiments indicated that there is potential for improving management of spotted wilt though development of cultivars that suppress spotted wilt epidemics more than currently available cultivars. There was no indication that differences in spotted wilt ratings corresponded to differences in numbers of thrips adults or larvae.

scholarly journals Vineyard ecosystems are structured and distinguished by fungal communities impacting the flavour and quality of wine

2019 ◽  
Author(s):  
Di Liu ◽  
Qinglin Chen ◽  
Pangzhen Zhang ◽  
Deli Chen ◽  
Kate S. Howell
Keyword(s):  
Regional Distribution ◽  
Distribution Patterns ◽  
Wine Fermentation ◽  
Fungal Communities ◽  
Soil Microbiome ◽  
Soil Conditions ◽  
Wine Aroma ◽  
Wine Production ◽  
Microbial Distribution

AbstractThe flavours of foods and beverages are formed by the agricultural environment where the plants are grown. In the case of wine, the location and environmental features of the vineyard site imprint the wine with distinctive aromas and flavours. Microbial growth and metabolism play an integral role in wine production from the vineyard to the winery, by influencing grapevine health, wine fermentation, and the flavour, aroma and quality of finished wines. The mechanism by which microbial distribution patterns drive wine metabolites is unclear and while flavour has been correlated with bacterial composition for red wines, bacterial activity provides a minor biochemical conversion in wine fermentation. Here, we collected samples across six distinct winegrowing areas in southern Australia to investigate regional distribution patterns of both fungi and bacteria and how this corresponds with wine aroma compounds. Results show that soil and must microbiota distinguish winegrowing regions and are related to wine chemical profiles. We found a strong relationship between microbial and wine metabolic profiles, and this relationship was maintained despite differing abiotic drivers (soil properties and weather/ climatic measures). Notably, fungal communities played the principal role in shaping wine aroma profiles and regional distinctiveness. We found that the soil microbiome is a potential source of grape- and must-associated fungi, and therefore the weather and soil conditions could influence the wine characteristics via shaping the soil fungal community compositions. Our study describes a comprehensive scenario of wine microbial biogeography in which microbial diversity responds to surrounding environments and ultimately sculpts wine aromatic characteristics. These findings provide perspectives for thoughtful human practices to optimise food and beverage flavour and composition through understanding of fungal activity and abundance.

scholarly journals CHEMICAL COMPOSITION OF WHOLE GRAINS IN COMMON BEANS LANDRACES AND BREEDING GENOTYPES

2015 ◽  
Vol 2 ◽  
pp. 81 ◽  
Author(s):  
Gilberto Antonio Peripolli Bevilaqua ◽  
Iraja Ferreira Antunes
Keyword(s):  
Nutritional Composition ◽  
Whole Grain ◽  
Breeding Programs ◽  
Breeding Lines ◽  
Manganese Zinc ◽  
Nutritional Characteristics ◽  
Calcium Magnesium ◽  
The Common ◽  
Iron Manganese ◽  
Insoluble Fiber

The common bean has been object of breeding programs aiming the development of new cultivars adapted to varied production system and shown differentiated nutritional characteristics. Due a genetic diversity existent the landraces can be used directly for cropping, for present characteristics desirable. Little information exists about mineral content and other quality traits for those bean landraces. The aim of this paper was to verify the variability for grain nutricional caracters in breeding cultivars and landraces of bean from Rio Grande do Sul state, Brazil. The experiment was conducted in 2009/2010 in Experimental Station Cascata, of Embrapa Temperate Agriculture. In whole grain of 54 bean genotypes with black and no black coat were determined macroelements (nitrogen, phosphorus, potash, calcium, magnesium and sulfur), oligoelements (iron, manganese, zinc and cuprum), protein and ash content, insoluble fiber, digestive nutrient and antioxidant astragalina. The results shown that the landraces varieties presents nutritional composition of macro and oligoelements, fibers, protein and ash contents in whole grain similar than that of breeding lines and cultivars. The black coat grain from breeding programs showed better nutritional quality for macro and oligoelements content than coloured grain, highlighting TB 02-04 e TB 01-01. The landraces with coloured grains TB 02-26, TB 02-24 and TB 03-13 showed the high levels of astragaline.

scholarly journals The genetic improvement of grapevine cultivars and wine yeast strains: Novel approaches to the ancient art of winemaking

2003 ◽  
Vol 22 (1) ◽  
pp. 31-43
Author(s):  
I. S. Pretorius
Keyword(s):  
Wine Yeast ◽  
Wine Industry ◽  
Market Demand ◽  
Wine Production ◽  
Yeast Strains ◽  
Quantum Leap ◽  
Grape Quality ◽  
The Cost ◽  
Grape Varieties ◽  
Grape Cultivars

The widening gap between wine production and wine consumption, the shift of consumer preferences away from basic commodity wine to top quality wine, and the gruelling competition brought about by economic globalisation call for a total revolution in  the magical world of wine. In the process of transforming the wine industry from a production-driven industry to a market-orientated enterprise, there is an increasing dependence on, amongst others, biotechnological innovation to launch the wine industry with a quantum leap across the formidable market challenges of the 21st century. Market-orientated designer grape cultivars and wine yeast strains are currently being genetically programmed with surgical precision for the cost-competitive production of high quality grapes and wine with relatively minimal resource inputs and a low environmental impact. With regard to Grapevine Biotechnology, this entails the establishment of stress tolerant and disease resistant varieties of Vitis vinifera with increased productivity, efficiency, sustainability and environmental friendliness, especially regarding improved pest and disease control, water use efficiency and grape quality. With regard to Wine Yeast Biotechnology, the emphasis is on the development of Saccharomyces cerevisiae strains with improved fermentation, processing and biopreservation abilities, and capacities for an increase in the wholesomeness and sensory quality of wine. The successful commercialisation of transgenic grape cultivars and wine yeasts depends on a number of scientific, technical, safety, ethical, legal, economic and marketing factors, and it therefore will be unwise to entertain high expectations in the short term. However, in the light of the phenomenal potential advantages of tailor-made grape varieties and yeast strains, it would be equally self-destructive in the long term if this strategically important “life insurance policy” is not taken out by the wine industry. This overview highlights the most important examples of the way in which V. vinifera grape varieties and S. cerevisiae wine yeast strains are currently being designed with surgical precision on the basis of market demand for the cost-effective, sustainable and environmentally friendly production of healthy, top quality grapes and wine.

Flavor Profiles of Wild Species-Derived Peanut Breeding Lines

2008 ◽  
Vol 35 (2) ◽  
pp. 81-85 ◽  
Author(s):  
S. P. Tallury ◽  
H. E. Pattee ◽  
T. G. Isleib ◽  
H. T. Stalker
Keyword(s):  
Wild Species ◽  
Interspecific Hybrid ◽  
Diploid Species ◽  
Sensory Attributes ◽  
Sources Of Resistance ◽  
Breeding Programs ◽  
Breeding Lines ◽  
Arachis Hypogaea L ◽  
Cultivated Peanut ◽  
Important Quality

Abstract Several diploid wild species of the genus Arachis L. have been used as sources of resistance to common diseases of cultivated peanut (Arachis hypogaea L.). Because flavor is among the most important quality attributes for commercial acceptance of roasted peanuts, sensory attributes of interspecific hybrid derived breeding lines were evaluated to determine if transfer of disease resistance from wild species is associated with concomitant changes in flavor. Sixteen interspecific hybrid derivatives with five diploid species in their ancestries and the commercial flavor standard, NC 7 were evaluated for sensory quality. Significant variation among entries was found for the roasted peanut, sweet, and bitter sensory attributes, but not for the overall contrast between NC 7 and the wild species-derived breeding lines. The variation was either between two groups of wild species-derived breeding lines or within one or both groups. Introduction of disease and pest resistance traits from Arachis species did not result in degradation or improvement of the flavor profile. This suggests that flavor of wild species-derived germplasm will not prevent its use either as parents in peanut breeding programs or as cultivars.

scholarly journals Personality and collective decision-making in foraging herbivores

2009 ◽  
Vol 277 (1684) ◽  
pp. 1093-1099 ◽  
Author(s):  
Pablo Michelena ◽  
Raphaël Jeanson ◽  
Jean-Louis Deneubourg ◽  
Angela M. Sibbald
Keyword(s):  
Group Living ◽  
Population Level ◽  
Distribution Patterns ◽  
Model Species ◽  
Social Attraction ◽  
Homogeneous Groups ◽  
Animal Distribution ◽  
Parameter Values ◽  
Vegetation Patches

The mechanisms by which group-living animals collectively exploit resources, and the role of individuals in group decisions, are central issues for understanding animal distribution patterns. We investigated the extent to which boldness and shyness affect the distribution of social herbivores across vegetation patches, using sheep as a model species. Using an experimental and a theoretical approach, we show that collective choices emerge through the nonlinear dynamics of interactions between individuals, at both short and long distances. Within a range of parameter values derived from the observation of homogeneous groups of each behavioural type, we propose a simple mechanism whereby the same interaction rules can result in different patterns of distribution across patches for bold and shy individuals. We present a mathematical model based on behavioural rules derived from experiments, in which crowding and conspecific attraction affect the probability of entering or leaving patches. Variation in the strength of social attraction is sufficient to account for differences in spatial distribution across patches. The model predicts that resource fragmentation more strongly affects the distribution patterns of shy groups, and suggests that the presence of both bold and shy individuals within groups would result in more flexible behaviour at the population level.

scholarly journals Evaluation of Canadian barley breeding lines for Fusarium head blight resistance

2015 ◽  
Vol 95 (5) ◽  
pp. 923-929 ◽  
Author(s):  
Xinyao He ◽  
Mohamed Osman ◽  
James Helm ◽  
Flavio Capettini ◽  
Pawan K. Singh
Keyword(s):  
Fusarium Head Blight ◽  
Fusarium Head Blight Resistance ◽  
Correlation Coefficients ◽  
Blight Resistance ◽  
Head Blight ◽  
Breeding Programs ◽  
Breeding Lines ◽  
Barley Breeding ◽  
Days To Heading ◽  
Fhb Resistance

He, X., Osman, M., Helm, J., Capettini, F. and Singh, P. K. 2015. Evaluation of Canadian barley breeding lines for Fusarium head blight resistance. Can. J. Plant Sci. 95: 923–929. Fusarium head blight (FHB) is a major challenge to the successful production of barley in Canada, as well as for end-users such as the malting and brewing industries. Due to the quantitative inheritance of FHB resistance, continuous effort is required to identify breeding lines with improved FHB resistance and incorporate them into crossing schemes to enhance FHB resistance. In the present study, 402 advanced breeding lines from Alberta, Canada, were evaluated in the FHB screening nursery at CIMMYT, Mexico. In 2011 and 2012, FHB incidence was measured on a scale of 1 to 4 to eliminate the most susceptible lines. In 2013 and 2014, 181 lines with the lowest disease scores in the previous 2 yr were tested in replicated experiments for field FHB index, Fusarium-damaged kernels, and deoxynivalenol content. Agronomic and morphological traits, specifically days to heading, plant height, and row and hull types were also evaluated in relations to FHB parameters. Correlation coefficients among the three FHB parameters in both 2013 and 2014 were all significant at P<0.0001, ranging from 0.36 to 0.63. Additional correlation analysis showed that late-maturing, tall, and two-row lines tended to have lower disease, whereas hull type did not show a significant correlation with FHB. Several lines with high and stable FHB resistance similar to that of the resistant checks were identified. These could be used in breeding programs as resistance sources or be registered as new cultivars if their overall attributes meet commercial standards.

Australian canola germplasm differs in nitrogen and sulfur efficiency

2008 ◽  
Vol 59 (2) ◽  
pp. 167 ◽  
Author(s):  
Tatjana Balint ◽  
Zdenko Rengel ◽  
David Allen
Keyword(s):  
Genotypic Variation ◽  
Dry Weight ◽  
Breeding Programs ◽  
Relative Growth ◽  
Breeding Lines ◽  
Shoot Dry Weight ◽  
Sulfur Supply ◽  
Utilisation Efficiency ◽  
Low Sulfur ◽  
Low Nitrogen

Eighty-four canola genotypes, including current commercial Australian genotypes, some older Australian genotypes, new breeding lines, and several genotypes from China, were screened for nitrogen and sulfur efficiency in the early growth stage. Plants were grown in a glasshouse using virgin brown Lancelin soil (Uc4.22) supplied with basal nutrients. The treatments were: (i) adequate nitrogen and sulfur, (ii) low nitrogen, and (iii) low sulfur. Canola shoots were harvested at 38 days after sowing when growth reduction and the nitrogen and sulfur deficiency symptoms were evident in most genotypes. The nitrogen or sulfur efficiency in canola genotypes was evaluated on the basis of: (1) growth at low nitrogen or sulfur supply, (2) growth at low relative to adequate nitrogen and sulfur supply, and (3) nitrogen or sulfur utilisation efficiency expressed as shoot dry weight per unit of nitrogen or sulfur content in shoots. Genotypic variation in growth and nitrogen or sulfur efficiency in canola germplasm was significant. Two genotypes (Chikuzen and 46C74) were ranked efficient and 2 inefficient (CBWA-005 and Beacon) in uptake and utilisation of nitrogen under all 3 criteria. In terms of sulfur efficiency, genotype Argentina was ranked efficient, whereas CBWA-003 and IB 1363 were classified inefficient under all 3 criteria. Two canola genotypes (Surpass 600 and 46C74) were both nitrogen- and sulfur-efficient in terms of relative growth at low v. adequate nutrition; their use in the breeding programs could be considered.

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