scholarly journals Morphological Characteristics and Genetic Variability of Trichoderma spp. From Conventional Cotton Crop Soils in Federal District, Brazil

2018 ◽  
Vol 10 (8) ◽  
pp. 146
Author(s):  
Daniel Diego C. Carvalho ◽  
Peter W. Inglis ◽  
Zilá R. de Ávila ◽  
Irene Martins ◽  
Paulo Henrique P. C. Muniz ◽  
...  

This study aimed to characterize 41 isolates of Trichoderma from conventional cotton crops soils as the morphological and cultural characteristics and to investigate polymorphism, using RAPD markers. The most common group comprised 80.6% of the isolates and was identified as a strain of Trichoderma harzianum. The others species were T. aureoviride (7.3%), T. viride (7.3%) and T. crassum (4.8%). The four species were morphologically distinct in the evaluated characteristics such as colony appearance and mycelium growth rate after being grown on malt extract agar (MEA), potato dextrose agar (PDA) and oatmeal agar (OA) media, and also in shape of conidia, phialides, and conidiophores. The four species were separated in a dendogram, after using RAPD markers. Besides, RAPD was efficient in demonstrating the high intraspecific genetic variation among isolates of two species (T. harzianum and T. aureoviride).

Author(s):  
M Irshad ◽  
M Idrees ◽  
A Tariq ◽  
ML Pathak ◽  
M Hanif ◽  
...  

The aim of present research was to study the genetic diversity among Asparagus species and its cultivars using morphological characteristics and RAPD markers. In-vitro and field experiments of 14 germplasm sources of Asparagus species and its cultivars were conducted at the Kohat University of Science and Technology to estimate the comparative performance. Highest genotypic variance, phenotypic variance, genotypic and phenotypic coefficient of variance were observed in shoot height in shoot related traits were 318.40, 320.30, 939.34 and 944.96, respectively, whereas highest values for root related traits were observed in root length that were 21.84, 22.35, 141.60 and 144.91 respectively. Among the shoot related traits maximum heritability, genetic advance and genetic gain were calculated for shoot length, while in root related traits these characters were highest for root dry weight. RAPD markers were used to evaluate genetic diversity analysis of 14 germplasm sources of Asparagus species and its cultivars. RAPD markers generated a total of 247 bands, of these 239 bands were polymorphic with average of 34.1 bands per primer. Cluster analysis based on Neighbor Joining methods showed that wild species (A. adsendens, A. densiflorus, A. capitatus, A. gracelus, A. plumosus, A. racemosus and A. setaceus) were genetically distant from A. officinalis and its cultivars (Abril, Apollo, Gersengum, Huchel, Para seletion and Taranga). The results of the present investigations could be particularly used for authentic identification and would be useful for evaluation of genetic improvement of Asparagus species and its cultivars. J. Biodivers. Conserv. Bioresour. Manag. 2019, 5(1): 13-24


Plant Disease ◽  
2013 ◽  
Vol 97 (12) ◽  
pp. 1660-1660
Author(s):  
A. Garibaldi ◽  
D. Bertetti ◽  
A. Poli ◽  
M. L. Gullino

Verbascum nigrum L., common name black mullein, family Scrophulariaceae, is a rustic perennial plant belonging to the native flora in Italy. The plant, which produces bright yellow flowers densely grouped on the tall stem, is used in low-maintenance gardens. During fall 2012, plants grown in mixed planting borders in a garden located in Biella Province (northern Italy) showed extensive foliar disease. Approximately 100 plants were affected by the disease. Early symptoms were small, light brown, necrotic spots on leaves, later reaching 10 mm diameter, with an irregular shape, showing a chlorotic halo. Necrotic areas often coalesced surrounded by yellowing. In some cases, the internal part of the necrotic areas dried with the appearance of holes. The disease progressed from the base to the apex of plants. In some cases, most of leaves turned completely necrotic and plants were severely damaged. Symptomatic tissues were immersed in a solution containing 1% sodium hypochlorite for 2 to 3 s and rinsed with sterile distilled water. Small fragments were excised from the margin of lesions and plated on potato dextrose agar (PDA) medium. Petri dishes were incubated at temperatures ranging between 20 and 25°C under alternating daylight and darkness (12 h light, 12 h dark). A single fungus was consistently isolated and subcultured on malt extract agar (MEA). On MEA, colonies were felty, white cream, and produced dark globose or subglobose pycnidia measuring 68 to 185 × 62 to 177 (average 122 × 113) μm, containing hyaline (light grey in mass), ellipsoid, non-septate conidia measuring 3.1 to 5.7 × 1.5 to 2.7 (average 4.0 × 2.0) μm after 15 days. The internal transcribed spacer (ITS) and D1/D2 regions of rDNA were amplified using the primers ITS1/ITS4 and NL1/NL4, respectively, and then sequenced (GenBank Accession Nos. KC411473 and KF041823). BLAST analysis of both fragments showed 99% homology with the sequences GU237753 and JQ768403 of Phoma novae-verbascicola Aveskamp, Gruyter & Verkley (Basionym: Phyllosticta verbascicola Ellis & Kellerm.). Morphological characteristics of the fungus also were consistent with the descriptions of P. poolensis var. verbascicola (Ellis & Kellerm.) Aa & Boerema (2) (Syn.: P. novae-verbascicola). Pathogenicity tests were performed by spraying a conidial suspension (4 × 104 CFU/ml) obtained from 15-day-old PDA cultures of the fungus onto leaves of three healthy 3-month-old V. nigrum. Three plants inoculated with sterile water served as controls. Plants were maintained in a growth chamber for 5 days at 25 ± 1°C under 70 to 90% relative humidity. The first foliar lesions developed on leaves 2 days after inoculation and after 5 days, 80% of leaves were severely infected. Control plants remained healthy. The organism reisolated on PDA from leaf lesions was identical in morphology to the isolate used for inoculation. The pathogenicity test was carried out twice. Phoma spp. has been reported on Verbascum spp. P. novae-verbascicola has been very recently described (1). To our knowledge, this is the first report of the presence of P. novae-verbascicola on V. nigrum in Italy. At present, the economic importance of this disease is limited, but may become a more significant problem if the cultivation of this species increases. References: (1) M. M. Aveskamp et al. Studies in Mycology, 65: 1, 2010. (2) J. de Gruyter et al. Persoonia 15 (3): 369, 1993.


Foods ◽  
2019 ◽  
Vol 8 (7) ◽  
pp. 239 ◽  
Author(s):  
Aikaterini Papadaki ◽  
Panagiota Diamantopoulou ◽  
Seraphim Papanikolaou ◽  
Antonios Philippoussis

Morchella sp. is one of the most expensive mushrooms with a high nutritional profile. In this study, the polysaccharide content of Morchella species was investigated. Specifically, mycelium growth rate, biomass production, sclerotia formation, and glucosamine and total polysaccharides content of six Morchella species grown on a starch-based media were evaluated. Submerged fermentations in potato dextrose broth resulted in a glucosamine content of around 3.0%. In solid-state fermentations (SSF), using potato dextrose agar, a high linear growth rate (20.6 mm/day) was determined. Increased glucosamine and total polysaccharides content were observed after the formation of sclerotia. Biomass and glucosamine content were correlated, and the equations were used for the indirect estimation of biomass in SSF with agro-industrial starch-based materials. Wheat grains (WG), potato peels (PP), and a mixture of 1:1 of them (WG–PP) were evaluated as substrates. Results showed that the highest growth rate of 9.05 mm/day was determined on WG and the maximum biomass yield (407 mg/g) on WG–PP. The total polysaccharide content reached up to 18.4% of dried biomass in WG–PP. The results of the present study proved encouraging for the efficient bioconversion of potato and other starch-based agro-industrial waste streams to morel biomass and sclerotia eliciting nutritional and bioactive value.


2019 ◽  
pp. 1183-1187 ◽  
Author(s):  
Alyson Silva de Araujo ◽  
Luiz Eduardo Bassay Blum ◽  
Cícero Célio de Figueiredo

The use of sewage sludge to produce biochar is one of the best alternatives for the final destination of this material, allowing for reuse of nutrients and reducing the dependence on mineral fertilizers. Sewage sludge biochar (SSB) stands out as an enhancer of the physical, chemical and biological properties of the soil. The use of beneficial microorganisms such as Trichoderma spp. in combination with biochar may have a synergistic effect on the development of different plants and needs to be better studied. The SSB was produced from sewage sludge biomass (SS) obtained from the sewage treatment plant (STP) of the Federal District Environmental Sanitation Company (CAESB), Brasilia, DF, Brazil. The SSB was produced in an electric tubular furnace at 500 °C and showed the following characteristics: carbon (19%), nitrogen (2.3%), hydrogen (1.7%), specific surface area (52.5 m2 g-1), pore volume (0.053 ml g-1). An experiment was carried out in a greenhouse to evaluate the synergistic effect of SSB application (0.5% w/w) in combination with T. harzianum (TH) on soybean development. The treatments adopted were: (1) control – autoclaved soil, (2) TH, (3) SSB and (4) SSB + TH. The SSB was applied 15 days before soybean planting and the TH was applied to the soil two times, once at eight days before planting and the other at the time of planting. The SSB resulted in a 200% increase in the number of pods when compared to the exclusive application of T. harzianum. Application of SSB with T. harzianum increased germination by 20%, as well as a 70% increase in fresh and dry soybean mass in relation to the control. The agronomic indices evaluated in this study demonstrated that the use of SSB in conjunction with T. harzianum presents a synergistic effect, allowing for better development of the soybean plants.


Plant Disease ◽  
2020 ◽  
Author(s):  
Xue Li ◽  
Jie Li ◽  
Hua Yong Bai ◽  
Kecheng Xu ◽  
Ruiqi Zhang ◽  
...  

Rubber tree (Hevea brasiliensis (Willd. ex Adr. Juss) Müll. Arg.) is used for the extraction of natural rubber and is an economically and socially important estate crop commodity in many Asian countries such as Indonesia, Malaysia, Thailand, India, Sri Lanka, China and several countries in Africa (Pu et al, 2007). Xishuangbanna City and Wenshan City are the main rubber cultivation areas in Yunnan Province, China. In November 2012, rubber tree showing typical wilt symptoms (Fig. 1 A) and vascular stains (Fig. 1 B) were found in Mengla County, Xishuangbanna City. This disease was destructive in these trees and plant wilt death rate reached 5%. The diseased wood pieces (0.5cm long) from trunk of rubber was surface disinfected with 75% ethanol for 30s and 0.1% mercuric chloride (HgCl2) for 2min, rinsed three times with sterile distilled water, plated onto malt extract agar medium (MEA), and incubated at 28℃. After 7 days, fungal-like filaments were growing from the diseased trunk. Six cultures from 6 rubber trunk were obtained and incubated on MEA at 28℃, after 7 days to observe the cultural features. The mycelium of each culture was white initially on MEA, and then became dark green. Cylindrical endoconidia apices rounded, non-septate, smooth, single or borne in chains (8.9 to 23.6 × 3.81 to 6.3μm) (Fig. 1 C). Chlamydospores (Fig. 1 D) were abundant, thick walled, smooth, forming singly or in chains (11.1 to 19.2 × 9.4 to 12.0μm). The mould fungus was identifed as Chalaropsis based on morphology (Paulin-Mahady et al. 2002). PCR amplification was carried out for 3 isolates, using rDNA internal transcribed spacer (ITS) primer pairs ITS1F and ITS4 (Thorpe et al. 2005). The nucleotide sequences were deposited in the GenBank data base and used in a Blast search of GenBank. Blast analysis of sequenced isolates XJm8-2-6, XJm8-2 and XJm10-2-6 (accessions KJ511486, KJ511487, KJ511489 respectively) had 99% identity to Ch. thielavioides strains hy (KF356186) and C1630 (AF275491). Thus the pathogen was identified as Ch. thielavioides based on morphological characteristics and rDNA-ITS sequence analysis. Pathogenicity test of the isolate (XJm8-2) was conducted on five 1-year-old rubber seedlings. The soil of 5 rubber seedlings was inoculated by drenching with 40 ml spore suspension (106 spores / ml). Five control seedlings were inoculated with 40 ml of sterile distilled water. All the seedlings were maintained in a controlled greenhouse at 25°C and watered weekly. After inoculated 6 weeks, all the seedlings with spore suspension produced wilt symptoms, as disease progressed, inoculated leaves withered (Fig. 1 E) and vascular stains (Fig. 1 F) by 4 months. While control seedlings inoculated with sterile distilled water remained healthy. The pathogen re-isolated from all inoculated symptomatic trunk was identical to the isolates by morphology and ITS analysis. But no pathogen was isolated from the control seedlings. The pathogenicity assay showed that Ch. thielavioides was pathogenic to rubber trees. Blight caused on rubber tree by Ceratocystis fimbriata previously in Brazil (Valdetaro et al. 2015), and wilt by Ch. thielavioides was not reported. The asexual states of most species in Ceratocystis are “chalara” or “thielaviopsis” (de Beer et al. 2014). To our knowledge, this is the first report of this fungus causing wilt of rubber in China. The spread of this disease may pose a threat to rubber production in China.


Plant Disease ◽  
1997 ◽  
Vol 81 (7) ◽  
pp. 809-816 ◽  
Author(s):  
W. J. Kaiser ◽  
B.-C. Wang ◽  
J. D. Rogers

Isolates of Ascochyta fabae from faba bean (Vicia faba) and A. lentis from lentil (Lens culinaris) collected from different countries were used in this study. The Didymella teleomorph (sexual state) of each fungus was induced to develop and mature on inoculated sterile lentil stems. Both fungi were heterothallic, with two mating types, designated MAT1-1 and MAT1-2. When certain isolates of A. fabae and A. lentis were crossed, hybrid pseudothecia developed. Growth, sporulation, colony appearance, morphology, and pathogenicity of the hybrid progeny frequently differed greatly from the parent isolates. Inoculations with single-ascospore progeny from matings among compatible isolates of A. fabae caused disease in faba bean but not in lentil; inoculations with single-ascospore progeny from matings among compatible isolates of A. lentis incited disease in lentil but not in faba bean. Inoculations with single-ascospore progeny from crosses between faba bean and lentil isolates did not induce disease in either host. Asci from crosses between A. fabae and A. lentis mostly contained fewer than eight ascospores that were, on average, larger than those from eight-spored asci. Matings among certain isolates of A. fabae resulted in production of pseudothecia with ascospores considerably larger than is typical for D. fabae. Random amplified polymorphic DNA (RAPD) banding patterns of Ascochyta isolates from faba bean and lentil are clearly different, and banding patterns from hybrid progeny from crosses between A. fabae and A. lentis confirmed hybridity. RAPD markers proved useful in supporting identifications of ascospore isolates from faba bean to known Ascochyta species. Dendrogram analysis indicated similarity between the two fungal species was low. The pathogenicity tests, morphological characteristics, and RAPD markers indicate that A. fabae and A. lentis represent distinct taxa. D. lentis, with its anamorph, A. lentis, is proposed as a new species that is distinct from D. fabae, with its anamorph, A. fabae.


Plant Disease ◽  
2010 ◽  
Vol 94 (1) ◽  
pp. 133-133 ◽  
Author(s):  
N. Ogris ◽  
T. Hauptman ◽  
D. Jurc ◽  
V. Floreancig ◽  
F. Marsich ◽  
...  

In many European countries, the anamorphic Chalara fraxinea Kowalski (teleomorph Hymenoscyphus albidus [Roberge ex Desm.] Phillips; 1–3) is responsible for a severe and rapidly spreading dieback of common ash (Fraxinus excelsior L.) since it was first reported in Poland. Recently, this disease was added to the EPPO Alert List and the NAPPO Phytosanitary Alert System. Symptomatic trees were observed in a 1.8-ha ash-maple forest in northeastern Italy (Fusine, UD; 46°30′N, 13°37′E; 782 m above sea level) along the Italo-Slovenian border in July 2009. Symptoms were found on approximately 10% of mature common ash and 70% of seedlings. Main symptoms were shoot, twig, and branch dieback, wilting, and bark cankers (1). Fungal fruiting bodies were not found on or near the canker surface. Furthermore, longitudinal and radial sections through the cankers revealed gray-to-brown xylem discoloration. One symptomatic 3-year-old plant was randomly selected and from the necrotic margin of one canker previously surface-sterilized with 3% sodium hypochlorite and rinsed, four 2-mm-wide chips were placed on malt extract agar (MEA) and incubated at 21 ± 1°C in the dark. Among a variety of microorganisms, after 19 days, slow-growing colonies (mean radius of 12 mm) appeared that were effuse, cottony, and often fulvous brown but sometimes dull white with occasional gray-to-dark gray patches. The purified isolate was then transferred to the same medium at 4 ± 1°C in the dark, and after 11 days, hyaline-to-dark gray phialides were observed producing numerous conidia in slimy droplets and sometimes in chains. Phialophores measured 8.6 to 21.0 (15.1) μm long (n = 20), 4.2 to 13.4 (8.8) × 3.6 to 5.5 (4.7) μm at the base, and 5.2 to 8.7 (6.5) × 2.5 to 3.1 (2.8) μm at the collarette; conidia measured 2.8 to 4.2 (3.4) × 1.9 to 2.5 (2.2) μm (n = 40); and first formed conidia measured 5.5 to 6.5 (5.9) × 1.8 to 2.5 (2.1) μm (n = 20). These morphological characteristics matched Kowalski's (1) description of C. fraxinea. In August of 2009, the fungal isolate was used to test pathogenicity with current year shoots of 25 6-year-old (150 to 210 cm high) asymptomatic common ash trees under quarantine conditions (Slovenian Forestry Institute's experimental plots). For every plant, the bark of the main shoot (10 to 13 mm in diameter) was wounded with a 6-mm-diameter cork borer. Twenty saplings were inoculated with one 6-mm-diameter mycelial plug obtained from the margin of a 26-day-old culture (MEA), while five saplings were inoculated with sterile MEA plugs. All wounds were sealed with Parafilm and aluminum foil. After 28 days, all plants inoculated with the C. fraxinea showed bark lesions (2 to 39 mm long, mean 7 mm) and wood discoloration (6 to 85 mm long, mean 22 mm) from which the pathogen was reisolated. These symptoms were absent from controls and the pathogen was never reisolated. To our knowledge, this is the first report of C. fraxinea in Italy. Investigations on its presence in all Fraxinus species naturally growing in the investigated area and in the nearest regions are in progress. The obtained isolate is preserved in both Padova and Ljubljana herbaria as CFIT01. References: (1) T. Kowalski. For. Pathol. 36:264, 2006. (2) T. Kowalski and O. Holdenrieder. For. Pathol. 39:1, 2009. (3) T. Kowalski and O. Holdenrieder. For. Pathol. 39:304, 2009.


Author(s):  
Seddighe Mohammadi ◽  
Leila Ghanbari

Wheat take-all disease caused by Gaeumannomyces graminis var. tritici has recently been detected in different regions of Iran. With respect to biocontrol effect of Trichoderma spp. on many pathogenic fungi, seven isolates of Trichoderma and four isolates of Talaromyces were in vitro evaluated in terms of their biological control against the disease causal agent. In dual culture test the five isolates showed efficient competition for colonization against pathogenic fungus and the highest percentages of inhibition belonging to Talaromyces flavus 60 and Talaromyces flavus 136 were 59.52 and 57.61%, respectively. Microscopic investigations showed that in regions where antagonistic isolates and Gaeumannomyces graminis var. tritici coincide, hyphal contact, penetration and fragmentation of Gaeumannomyces graminis var. tritici were observed. Investigating the effect of volatile and non-volatile compounds at 10 ml concentration showed that the highest inhibition percentage on mycelium growth of the pathogen caused by T. harzianum (44.76%) and T. longibrachiatum (52.38%) respectively.


2020 ◽  
Vol 77 (6) ◽  
pp. 472-479
Author(s):  
K.S. Reshetnyk ◽  
◽  
Yu.G. Prysedsky ◽  

The article provides growth, cultural and morphological characteristics of the vegetative mycelium on agar nutrient medium under the influence of laser irradiation for three strains of Laetiporus sulphureus from the Collection of basidiomycete cultures of the Department of Botany and Ecology of Vasyl' Stus Donetsk National University. The study was performed on potatoglucose agar (PGA) at a temperature of 26 ± 1 °C. It has been found that cultural and morphological characteristics of the colonies and the radial rate of their growth depend on the duration of irradiation (5 and 10 s) and the wavelength of light – green (532 nm), blue (405 nm) and red light (635 nm). For all studied strains of L. sulphureus, the most effective irradiation is that with green light (irradiation energy 51.1 mJ/cm2) lasting 10 s. Under the influence of this regime, the rate of radial mycelium growth increased from 23.4% to 66.7%, respectively, and the inoculum and the central zone of the surrounding colony formed a denser and higher mycelium of a pale sandy color. In general, the cultural and morphological features of the mycelial colonies of L. sulphureus strains under different conditions were somewhat different, but they were typical for this species.


2020 ◽  
Vol 3 (6) ◽  
pp. 45-54
Author(s):  
Sergey Volobuyev ◽  
◽  
Natalia Shakhova ◽  

The results of a study of growth characteristics, macromorphological features and biosynthetic potential of nine dikaryotic strains of Sarcodontia crocea (Polyporales, Basidiomycota) maintained in the Komarov Botanical Institute Basidiomycetes Culture Collection (LE-BIN) are presented. The strains studied were extracted from the basidiocarps collected on Malus domestica in the Belgorod, Oryol and Rostov Oblasts, as well as by seeding of basidiospores. The cultural and morphological characteristics and enzymatic activity of S. crocea were tested on both standard nutrient media (malt-extract agar – MEA, glucose-peptone agar – GPA) and modified semi-synthetic agarized media. Original compositions has been developed and for the first time nutrient media pre-pared using water-based wood extracts from Malus domestica (Malus-M) and Pyrus communis (Pyrus-M) have been approved. It was found that a significant reduction in growth rates was observed during the cultivation of S. crocea on agarized nutrient media of GPA, Malus-M and Pyrus-M. The studied strains on Malus-M and Pyrus-M exhibited high colony variability, sparse micelian mat, and loss of zonality and air mycelium intensity compared to MEA. It was shown that the composition of the nutrient medium strongly determined the ability of S. crocea strains to produce lignocelluolytic complex enzymes. The cellulolytic activity was noted for strains on all media studied, but no reliable differences were found in the cultivation of strains on sugar-rich MEA and three other semi-synthetic media. Only two strains (LE-BIN 2138 and 4355) were identified as having high cellulolytic activ-ity when grown on MEA. The absence of lignolytic complex enzyme activity was demonstrated when the strains were cultivated on new modified semi-synthetic agarized media of Malus-M and Pyrus-M.


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