scholarly journals A heat-shock 20 protein isolated from watermelon (ClHSP22.8) negatively regulates the response of Arabidopsis to salt stress via multiple signaling pathways

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e10524
Author(s):  
Yanjun He ◽  
Yixiu Yao ◽  
Lili Li ◽  
Yulin Li ◽  
Jie Gao ◽  
...  
Keyword(s):  
Salt Stress ◽  
Heat Shock ◽  
Signaling Pathways ◽  
Expression Patterns ◽  
Negative Regulator ◽  
Salt Stress Response ◽  
Over Expression ◽  
Qrt Pcr ◽  
Heat Shock Stress ◽  
Transgenic Lines

Heat-shock protein 20s (HSP20) were initially shown to play a role during heat shock stress; however, recent data indicated that HSP20 proteins are also involved in abiotic stress in plants. Watermelon is known to be vulnerable to various stressors; however, HSP20 proteins have yet to be investigated and characterized in the watermelon. In a previous study, we identified a negative regulator of salt stress response from watermelon: ClHSP22.8, a member of the HSP20 family. Quantitative real-time PCR (qRT-PCR) and promoter::β-glucuronidase (GUS) analysis revealed that ClHSP22.8 was expressed widely in a range of different tissues from the watermelon, but particularly in the roots of 7-day-old seedlings and flowers. Furthermore, qRT-PCR and GUS staining showed that the expression of ClHSP22.8 was significantly repressed by exogenous abscisic acid (ABA) and salt stress. The over-expression of ClHSP22.8 in Arabidopsis lines resulted in hypersensitivity to ABA and reduced tolerance to salt stress. Furthermore, the expression patterns of key regulators associated with ABA-dependent and independent pathways, and other stress-responsive signaling pathways, were also repressed in transgenic lines that over-expressed ClHSP22.8. These results indicated that ClHSP22.8 is a negative regulator in plant response to salt stress and occurs via ABA-dependent and independent, and other stress-responsive signaling pathways.

scholarly journals Molecular Characterization of NDL1-AGB1 Mediated Salt Stress Signaling: Further Exploration of the Role of NDL1 Interacting Partners

Cells ◽  
2021 ◽  
Vol 10 (9) ◽  
pp. 2261
Author(s):  
Nidhi Gupta ◽  
Abhishek Kanojia ◽  
Arpana Katiyar ◽  
Yashwanti Mudgil
Keyword(s):  
Salt Stress ◽  
Stress Response ◽  
G Protein ◽  
Salinity Stress ◽  
Expression Profiles ◽  
Expression Patterns ◽  
Negative Regulator ◽  
Salt Stress Response

Salt stress is considered to be the most severe abiotic stress. High soil salinity leads to osmotic and ionic toxicity, resulting in reduced plant growth and crop production. The role of G-proteins during salt stresses is well established. AGB1, a G-protein subunit, not only plays an important role during regulation of Na+ fluxes in roots, but is also involved in the translocation of Na+ from roots to shoots. N-Myc Downregulated like 1 (NDL1) is an interacting partner of G protein βγ subunits and C-4 domain of RGS1 in Arabidopsis. Our recent in-planta expression analysis of NDL1 reported changes in patterns during salt stress. Based on these expression profiles, we have carried out functional characterization of the AGB1-NDL1 module during salinity stress. Using various available mutant and overexpression lines of NDL1 and AGB1, we found that NDL1 acts as a negative regulator during salt stress response at the seedling stage, an opposite response to that of AGB1. On the other hand, during the germination phase of the plant, this role is reversed, indicating developmental and tissue specific regulation. To elucidate the mechanism of the AGB1-NDL1 module, we investigated the possible role of the three NDL1 stress specific interactors, namely ANNAT1, SLT1, and IDH-V, using yeast as a model. The present study revealed that NDL1 acts as a modulator of salt stress response, wherein it can have both positive as well as negative functions during salinity stress. Our findings suggest that the NDL1 mediated stress response depends on its developmental stage-specific expression patterns as well as the differential presence and interaction of the stress-specific interactors.

scholarly journals Genome-wide Identification of the Aspergillus oryzae GATA Transcription Factor Gene Family and expression Analysis under Temperature or Salt Stresses

2020 ◽  
Author(s):  
Chunmiao Jiang ◽  
Bin He ◽  
Zhe Zhang ◽  
Zhihong Hu ◽  
Chuannan Long ◽  
...  
Keyword(s):  
Salt Stress ◽  
Abiotic Stress ◽  
Expression Patterns ◽  
Critical Role ◽  
Analysis Data ◽  
Negative Regulator ◽  
Characteristic Type ◽  
Salt Stress Response ◽  
Type Iv ◽  
Transcriptional Regulatory

Abstract Background GATA transcription factors (TFs) are transcriptional regulatory proteins that contain a characteristic type-IV zinc finger and recognize the conserved GATA motif in the promoter region. Previous studies demonstrate that GATA TFs are involved in the regulation of diverse growth processes and various environmental stimuli stresses. Although the analysis of GATA TFs involved in abiotic stress have been performed in model plants and some fungi, information regarding GATA TFs in A. oryzae is extremely poor. Results Therefore, we identified seven GATA TFs from A. oryzae 3.042 genome, and named AoAreA, AoAreB, AoLreA, AoLreB, AoNsdD, AoSreA in correspondence to fungal orthologs, including a novel AoSnf5 with 20-residue between the Cys-X2-Cys motifs which was found in Aspergillus for the first time. Six known A. oryzae GATA TFs were classified into six subgroups, while the novel AoSnf5 also clustered into NSDD subgroups together with AoNsdD in the NJ_tree of all Aspergillus GATA TFs. Conserved motifs demonstrated that GATA TFs with similar motif compositions clustered into one subgroup, which suggests they might have similar genetic functions and further confirms the accuracy of the phylogenetic relationship of Aspergillus GATA TFs. The expression patterns of seven A. oryzae GATA TFs exhibited diversity under temperature and salt stresses. The expression analyses of AoLreA and AoLreB demonstrates AoLreA mainly played role in salt stress and AoLreB did under temperature stress. AoSreA was shown to positively regulate the expression of AoCreA and might act as a negative regulator in temperature and high salt stress response. In addition, the AoNsdD, AoSnf5, AoAreB, and AoAreA strongly responsed to salt stresses, while AoAreB and AoAreA showed opposite expression trends at high temperature. Overall, the expression patterns of these A. oryzae GATA TFs under distinct environmental conditions provided useful information for the further analysis of GATA TFs in regulation of various abiotic stress in A. oryzae. Conclusion In conclusion, the comprehensive analysis data of A. oryzae GATA TFs will provide insights into the critical role of A. oryzae GATA TFs in resistance to temperature and salt stresses in A. oryzae.

Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response

Planta ◽  
2016 ◽  
Vol 245 (2) ◽  
pp. 329-341 ◽  
Author(s):  
Hye-Yeon Seok ◽  
Dong-Hyuk Woo ◽  
Linh Vu Nguyen ◽  
Huong T. Tran ◽  
Vaishali N. Tarte ◽  
...  
Keyword(s):  
Salt Stress ◽  
Stress Response ◽  
Negative Regulator ◽  
Salt Stress Response

scholarly journals Protein Expression Profiles of Chlamydia pneumoniae in Models of Persistence versus Those of Heat Shock Stress Response

2006 ◽  
Vol 74 (7) ◽  
pp. 3853-3863 ◽  
Author(s):  
Sanghamitra Mukhopadhyay ◽  
Richard D. Miller ◽  
Erin D. Sullivan ◽  
Christina Theodoropoulos ◽  
Sarah A. Mathews ◽  
...  
Keyword(s):  
Stress Response ◽  
Heat Shock ◽  
Protein Expression ◽  
Chlamydia Pneumoniae ◽  
Expression Profiles ◽  
Stress Component ◽  
Expression Patterns ◽  
Heat Shock Stress ◽  
Shock Stress

ABSTRACT Chlamydia pneumoniae is an obligate intracellular pathogen that causes both acute and chronic human disease. Several in vitro models of chlamydial persistence have been established to mimic chlamydial persistence in vivo. We determined the expression patterns of 52 C. pneumoniae proteins, representing nine functional subgroups, from the gamma interferon (IFN-γ) treatment (primarily tryptophan limitation) and iron limitation (IL) models of persistence compared to those following heat shock (HS) at 42°C. Protein expression patterns of C. pneumoniae persistence indicates a strong stress component, as evidenced by the upregulation of proteins involved in protein folding, assembly, and modification. However, it is clearly more than just a stress response. In IFN persistence, but not IL or HS, amino acid and/or nucleotide biosynthesis proteins were found to be significantly upregulated. In contrast, proteins involved in the biosynthesis of cofactors, cellular processes, energy metabolism, transcription, and translation showed an increased in expression in only the IL model of persistence. These data represent the most extensive protein expression study of C. pneumoniae comparing the chlamydial heat shock stress response to two models of persistence and identifying the common and unique protein level responses during persistence.

scholarly journals Global identification and analysis of microRNAs involved in salt stress responses in two alfalfa (Medicago sativa ‘Millennium’) lines

2020 ◽  
Vol 100 (4) ◽  
pp. 445-455
Author(s):  
Jin Ma ◽  
Yichun Wang ◽  
Jiayun Li
Keyword(s):  
Salt Stress ◽  
Stress Responses ◽  
Target Genes ◽  
Expression Profiles ◽  
Expression Patterns ◽  
Salt Stress Response ◽  
Differentially Expressed Mirnas ◽  
Relative Water ◽  
Global Identification ◽  
Relative Electrical Conductivity

Alfalfa is an important economic crop; a mutant (M) strain was identified during planting and production. M plants consistently had better relative water content and relative electrical conductivity under higher salt conditions compared with the wild type (WT) plants, suggesting that M plants have higher tolerance for salt. To understand the microRNAs (miRNAs) involved in salt stress response in alfalfa, 128 miRNAs were identified from the WT and M alfalfa plants under normal and saline conditions. Of the 128 miRNAs, 29 and 23 differentially expressed miRNAs were identified in the M vs. WT control (M-CK vs. WT-CK) and salt-stressed M vs. WT (M-salt vs. WT-salt) comparison, respectively. These miRNAs responded to salt stress and showed different expression patterns after salt treatment. Their potential target genes were predicted and further analysed by GO classification and KEGG pathway analysis, where the majority of target genes were associated with plant growth and development, and exhibited significant changes in WT and M plants. In addition, compared with the WT plants, miR172-CNGC, miR319-CAX2, miR408-NHX and miR2590-CHX14/15 showed significant upregulation in M alfalfa plants, suggesting that M plants have higher ion transport levels. The differential expression profiles of miRNAs and putative target genes were further validated by quantitative real-time polymerase chain reaction. It is speculated that these miRNAs are involved in the increased salt tolerance of the M alfalfa plants.

scholarly journals ThCOL2 Improves the Salt Stress Tolerance of Tamarix hispida

2021 ◽  
Vol 12 ◽  
Author(s):  
Xiaojin Lei ◽  
Bing Tan ◽  
Zhongyuan Liu ◽  
Jing Wu ◽  
Jiaxin Lv ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Salt Stress ◽  
Salt Tolerance ◽  
Cell Damage ◽  
Expression Patterns ◽  
Nacl Stress ◽  
Tamarix Hispida ◽  
Resistance Response ◽  
Expression Levels ◽  
Qrt Pcr

The CONSTANS-LIKE (COL) transcription factor has been reported to play important roles in regulating plant flowering and the response to abiotic stress. To clone and screen COL genes with excellent salt tolerance from the woody halophyte Tamarix hispida, 8 ThCOL genes were identified in this study. The expression patterns of these genes under different abiotic stresses (high salt, osmotic, and heavy metal) and abscisic acid (ABA) treatment were detected using quantitative real-time PCR (qRT-PCR). The expression levels of 8 ThCOL genes changed significantly after exposure to one or more stresses, indicating that these genes were all stress-responsive genes and may be involved in the stress resistance response of T. hispida. In particular, the expression level of ThCOL2 changed significantly at most time points in the roots and leaves of T. hispida under salt stress and after ABA treatments, which may play an important role in the response process of salt stress through a mechanism dependent on the ABA pathway. The recombinant vectors pROKII–ThCOL2 and pFGC5941–ThCOL2 were constructed for the transient transformation of T. hispida, and the transient infection of T. hispida with the pROKII empty vector was used as the control to further verify whether the ThCOL2 gene was involved in the regulation of the salt tolerance response of T. hispida. Overexpression of the ThCOL2 gene in plants under 150 mM NaCl stress increased the ability of transgenic T. hispida cells to remove reactive oxygen species (ROS) by regulating the activity of protective enzymes and promoting a decrease in the accumulation of O2– and H2O2, thereby reducing cell damage or cell death and enhancing salt tolerance. The ThCOL2 gene may be a candidate gene associated with excellent salt tolerance. Furthermore, the expression levels of some genes related to the ABA pathway were analyzed using qRT-PCR. The results showed that the expressions of ThNCED1 and ThNCED4 were significantly higher, and the expressions of ThNCED3, ThZEP, and ThAAO3 were not significantly altered in OE compared with CON under normal conditions. But after 24 h of salt stress, the expressions of all five studied genes all were lower than the normal condition. In the future, the downstream genes directly regulated by the ThCOL2 transcription factor will be searched and identified to analyze the salt tolerance regulatory network of ThCOL2.

scholarly journals Genome-wide identification and expression analysis of the xyloglucan endotransglucosylase/hydrolase gene family in poplar

BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Zihan Cheng ◽  
Xuemei Zhang ◽  
Wenjing Yao ◽  
Yuan Gao ◽  
Kai Zhao ◽  
...  
Keyword(s):  
Salt Stress ◽  
Stress Responses ◽  
Tissue Specificity ◽  
Expression Patterns ◽  
Evolutionary Relationship ◽  
Rna Seq ◽  
Salt Stress Response ◽  
Populus Simonii ◽  
Cis Acting ◽  
Genome Wide

Abstract Background Xyloglucan endotransglucosylase/hydrolase (XTH) family plays an important role in cell wall reconstruction and stress resistance in plants. However, the detailed characteristics of XTH family genes and their expression pattern under salt stress have not been reported in poplar. Results In this study, a total of 43 PtrXTH genes were identified from Populus simonii × Populus nigra, and most of them contain two conserved structures (Glyco_hydro_16 and XET_C domain). The promoters of the PtrXTH genes contain mutiple cis-acting elements related to growth and development and stress responses. Collinearity analysis revealed that the XTH genes from poplar has an evolutionary relationship with other six species, including Eucalyptus robusta, Solanum lycopersicum, Glycine max, Arabidopsis, Zea mays and Oryza sativa. Based on RNA-Seq analysis, the PtrXTH genes have different expression patterns in the roots, stems and leaves, and many of them are highly expressed in the roots. In addition, there are11 differentially expressed PtrXTH genes in the roots, 9 in the stems, and 7 in the leaves under salt stress. In addition, the accuracy of RNA-Seq results was verified by RT-qPCR. Conclusion All the results indicated that XTH family genes may play an important role in tissue specificity and salt stress response. This study will lay a theoretical foundation for further study on molecular function of XTH genes in poplar.

scholarly journals In silico analysis and expression profiling of S-domain receptor-like kinases (SD-RLKs) under different abiotic stresses in Arabidopsis thaliana

BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Raju Mondal ◽  
Subhankar Biswas ◽  
Akanksha Srivastava ◽  
Suvajit Basu ◽  
Maitri Trivedi ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Abiotic Stress ◽  
Signaling Pathways ◽  
Differential Expression ◽  
Stress Responses ◽  
Abiotic Stresses ◽  
Expression Patterns ◽  
Light Stress ◽  
Regulatory Elements ◽  
Qrt Pcr

Abstract Background S-domain receptor-like kinases (SD-RLKs) are an important and multi-gene subfamily of plant receptor-like/pelle kinases (RLKs), which are known to play a significant role in the development and immune responses of Arabidopsis thaliana. The conserved cysteine residues in the extracellular domain of SD-RLKs make them interesting candidates for sensing reactive oxygen species (ROS), assisting oxidative stress mitigation and associated signaling pathways during abiotic stresses. However, how closely SD-RLKs are interrelated to abiotic stress mitigation and signaling remains unknown in A. thaliana. Results This study was initiated by examining the chromosomal localization, phylogeny, sequence and differential expression analyses of 37 SD-RLK genes using publicly accessible microarray datasets under cold, osmotic stress, genotoxic stress, drought, salt, UV-B, heat and wounding. Out of 37 SD-RLKs, 12 genes displayed differential expression patterns in both the root and the shoot tissues. Promoter structure analysis suggested that these 12 SD-RLK genes harbour several potential cis-regulatory elements (CREs), which are involved in regulating multiple abiotic stress responses. Based on these observations, we investigated the expression patterns of 12 selected SD-RLKs under ozone, wounding, oxidative (methyl viologen), UV-B, cold, and light stress at different time points using semi-qRT-PCR. Of these 12 SD-SRKs, the genes At1g61360, At1g61460, At1g61380, and At4g27300 emerged as potential candidates that maintain their expression in most of the stress treatments till exposure for 12 h. Expression patterns of these four genes were further verified under similar stress treatments using qRT-PCR. The expression analysis indicated that the gene At1g61360, At1g61380, and At1g61460 were mostly up-regulated, whereas the expression of At4g27300 either up- or down-regulated in these conditions. Conclusions To summarize, the computational analysis and differential transcript accumulation of SD-RLKs under various abiotic stresses suggested their association with abiotic stress tolerance and related signaling in A. thaliana. We believe that a further detailed study will decipher the specific role of these representative SD-RLKs in abiotic stress mitigation vis-a-vis signaling pathways in A. thaliana.

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