Impacts of Fertilization Optimization on Ammonia Volatilization, Soil Nitrification, Denitration Intensity From Wheat Fields and Nitrogen Utilization Under Water-saving Irrigation

Scholars have proposed the practice of split N fertilizer application (SNFA), which has proven to be an effective approach for enhancing N use efficiency. However, the effect of SNFA on NH3 volatilization, nitrification and denitration in soil, remain largely unknown. As such, the current study assessed soil NH3 volatilization, nitrification and denitrification intensities, abundance of nitrogen cycle-related funetional genes, and invertase activity for different treatments. We applied a rate of 240 kg·ha-1 of N, and the following fertilizer ratios of the percent base to that of topdressing under water-saving irrigation: N1 (basal/dressing, 100%/0%), N2 (basal/dressing, 70%/30%), N3 (basal/dressing, 50%/50%), N4 (basal/dressing, 30%/70%), and N5 (basal/dressing, 0%/100%). N3 treatment resulted in a significant decrease in rate of NH3 volatilization. This treatment also significantly reduced nitrification and denitrification intensities, primarily owing to the reduced functional genes abundance involved in the nitrogen cycle (Amoa-AOB, nirK and nirS) and reduced invertase activity (urease, nitrate reductase, nitrite reductase) in wheat-land soil. 15N tracer studies further demonstrated that N3 treatments significantly increased the grain nitrogen accumulation by 9.50-28.27% compared with that under other treatments. This increase was primarily due to an increase in the amount of N absorbed by wheat from soil and fertilizers, which was caused by an enhancement in total N uptake (7.2-21.81%). Collectively, these results suggest that the N3 treatment (basal/dressing, 50%/50%) improves N uptake by wheat, reduces the soil NH3 volatilization rate, and has the potential to reduce the amount of N2O generated by nitrification and denitrification.

Responses of Soil Nitrification Activities To Copper After A Moisture Stress

Some steps of the soil nitrogen cycle are sensitive to environmental pressures like soil moisture or contamination, which are expected to evolve during the next decades but such a double stress is not yet documented. This study aimed at assessing the importance of the soil moisture on the impact of copper (Cu) contaminations on the N cycling soil function using the potential nitrifying activities (PNA) as bioindicator. A loamy soil was first incubated 6 weeks in either 30, 60, or 90% of its water holding capacity (WHC) or alternating drought and rewetting periods. Thereafter, soil samples were exposed to a gradient of Cu concentrations through a bioassay. The dose-response curves of PNA in function of added Cu were modelled and we compared the different effective Cu concentrations (ECx) producing x % of PNA inhibition to highlight differences in threshold values. The preincubation moisture treatments significantly affected the PNA responses to the secondary Cu stress with, for instance, hormetic responses in all cases except for the dry-rewetting treatment. Small PNA inhibitions were estimated for high Cu doses in the soils with low water contents (30% WHC) or submitted to dry-rewetting cycles, contrarily to the patterns observed for the soils with high water contents (90% WHC) or submitted to a single period of drought. Overall, significant differences were found in estimated ECx values between moisture treatments.

Effects of Nitrification Inhibitors on Soil Nitrification and Ammonia Volatilization in Three Soils with Different pH

The application of nitrification inhibitors (NIs) is considered to be an efficient way to delay nitrification, but the effect of NIs combinations on soil nitrification and ammonia (NH3) volatilization are not clear in soils with different pH values. In this study, we explored the effect of nitrapyrin (CP) and its combinations with 3, 4-dimethylepyrazole phosphate (DMPP), dicyandiamide (DCD) on the transformation of nitrogen, potential nitrification rate (PNR), and ammonia (NH3) volatilization in a 120-day incubation experiment with three different pH values of black soil. Treatments included no fertilizer (Control), ammonium sulfate (AS), AS+CP (CP), AS+CP+DMPP (CP+DMPP), and AS+CP+DCD (CP+DCD). The application of NIs significantly decreased NO3−-N contents and potential nitrification rate (p < 0.05), while significantly increased NH4+-N contents (p < 0.05), especially CP+DCD and CP+DMPP were the most effective in the neutral and alkaline soils, respectively. In the acid soil, CP significantly increased total NH3 volatilization by 31%, while CP+DCD significantly reduced by 28% compared with AS. However, no significant difference was found in NH3 volatilization with and without NIs treatments (p > 0.05) in the neutral and alkaline soils. In conclusion, the combined nitrification inhibitors had the better efficiency in all three tested soils. CP+DCD and CP+DMPP are the most effective in inhibiting soil nitrification in the clay soils with higher pH value and lower organic matter, while CP+DCD had the potential in mitigating environment pollution by reducing N loss of NH3 volatilization in the loam soil with lower pH value and higher organic matter. It provided a theoretical basis for the application of high efficiency fertilizer in different soils. Further studies under field conditions are required to assess the effects of these nitrification inhibitors.

Responses of Functional Genes Involved In Nitrogen Cycling To Green Manuring In Different Paddy Soils In South China

Aims We studied the effects of green manuring on the nitrogen (N) cycling process in different paddy soils.Methods Field experiments conducted in Hunan, Jiangxi, Henan and Fujian provinces in south China to investigate the responses of rice yield, soil properties, and functional genes involved in N cycling to green manuring. The field experiments had four treatments, i.e., no fertilizer application (NF), using milk vetch (Astragalus sinicus L.) as green manure without chemical fertilizer (GM), winter fallow and chemical fertilizer (CF), and a combination of green manure and chemical fertilizer (GMCF). Results The results showed that rice yield significantly increased in GMCF treatment. The copies of nifH gene significantly increased in GMCF in Jiangxi and Henan provinces. Ammonia oxidizing archaeal (AOA) amoA gene was predominant in all provinces compared with ammonia oxidizing bacterial (AOB). Compared with CF treatment, The copies of AOB-amoA gene were reduced in GMCF, indicating the inhibition of soil nitrification. The nirK gene was negatively correlated with SOM, TN, NH4+-N, NO3--N and AP, indicating that the positive effects of green manure on soil nutrients caused the inhibition of denitrification process. The nirK gene was the most critical factor influencing rice yield among the tested functional genes, with a relative influence of 63.5%. In comparison SOM was the most important factor (with a relative influence of 41.0%) among soil chemical properties. Conclusions In conclusion, the application of green manures changed the abundance of functional genes involved in the N cycling, and combined application with chemical fertilizer inhibited soil nitrification and denitrification.

Soil ammonia-oxidizing archaea in a paddy field with different irrigation and fertilization managements

Because ammonia-oxidizing archaea (AOA) are ubiquitous and highly abundant in almost all terrestrial soils, they play an important role in soil nitrification. However, the changes in the structure and function of AOA communities and their edaphic drivers in paddy soils under different fertilization and irrigation regimes remain unclear. In this study, we investigated AOA abundance, diversity and activity in acid paddy soils by a field experiment. Results indicated that the highest potential ammonia oxidation (PAO) (0.011 μg NO 2 - –N g-1 d.w.day-1) was found in T2 (optimal irrigation and fertilization)—treated soils, whereas the lowest PAO (0.004 μg NO 2 - –N g-1 d.w.day-1) in T0 (traditional irrigation)- treated soils. Compared with the T0—treated soil, the T2 treatment significantly (P < 0.05) increased AOA abundances. Furthermore, the abundance of AOA was significantly (P < 0.01) positively correlated with pH, soil organic carbon (SOC), and PAO. Meanwhile, pH and SOC content were significantly (P < 0.05) higher in the T2—treated soil than those in the T1 (traditional irrigation and fertilization)- treated soil. In addition, these two edaphic factors further influenced the AOA community composition. The AOA phylum Crenarchaeota was mainly found in the T2—treated soils. Phylogenetic analysis revealed that most of the identified OTUs of AOA were mainly affiliated with Crenarchaeota. Furthermore, the T2 treatment had higher rice yield than the T0 and T1 treatments. Together, our findings confirm that T2 might ameliorate soil chemical properties, regulate the AOA community structure, increase the AOA abundance, enhance PAO and consequently maintain rice yields in the present study.

(S)-3-Hydroxybutyryl-CoA Dehydrogenase From the Autotrophic 3-Hydroxypropionate/4-Hydroxybutyrate Cycle in Nitrosopumilus maritimus

Ammonia-oxidizing archaea of the phylum Thaumarchaeota are among the most abundant organisms that exert primary control of oceanic and soil nitrification and are responsible for a large part of dark ocean primary production. They assimilate inorganic carbon via an energetically efficient version of the 3-hydroxypropionate/4-hydroxybutyrate cycle. In this cycle, acetyl-CoA is carboxylated to succinyl-CoA, which is then converted to two acetyl-CoA molecules with 4-hydroxybutyrate as the key intermediate. This conversion includes the (S)-3-hydroxybutyryl-CoA dehydrogenase reaction. Here, we heterologously produced the protein Nmar_1028 catalyzing this reaction in thaumarchaeon Nitrosopumilus maritimus, characterized it biochemically and performed its phylogenetic analysis. This NAD-dependent dehydrogenase is highly active with its substrate, (S)-3-hydroxybutyryl-CoA, and its low Km value suggests that the protein is adapted to the functioning in the 3-hydroxypropionate/4-hydroxybutyrate cycle. Nmar_1028 is homologous to the dehydrogenase domain of crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase that is present in many Archaea. Apparently, the loss of the dehydratase domain of the fusion protein in the course of evolution was accompanied by lateral gene transfer of 3-hydroxypropionyl-CoA dehydratase/crotonyl-CoA hydratase from Bacteria. Although (S)-3-hydroxybutyryl-CoA dehydrogenase studied here is neither unique nor characteristic for the HP/HB cycle, Nmar_1028 appears to be the only (S)-3-hydroxybutyryl-CoA dehydrogenase in N. maritimus and is thus essential for the functioning of the 3-hydroxypropionate/4-hydroxybutyrate cycle and for the biology of this important marine archaeon.