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eLife ◽  
2021 ◽  
Vol 10 ◽  
Author(s):  
Deike J Omnus ◽  
Matthias J Fink ◽  
Klaudia Szwedo ◽  
Kristina Jonas

The highly conserved protease Lon has important regulatory and protein quality control functions in cells from the three domains of life. Despite many years of research on Lon, only a few specific protein substrates are known in most organisms. Here, we used a quantitative proteomics approach to identify novel substrates of Lon in the dimorphic bacterium Caulobacter crescentus. We focused our study on proteins involved in polar cell differentiation and investigated the developmental regulator StaR and the flagella hook length regulator FliK as specific Lon substrates in detail. We show that Lon recognizes these proteins at their C-termini, and that Lon-dependent degradation ensures their temporally restricted accumulation in the cell cycle phase when their function is needed. Disruption of this precise temporal regulation of StaR and FliK levels in a Δlon mutant contributes to defects in stalk biogenesis and motility, respectively, revealing a critical role of Lon in coordinating developmental processes with cell cycle progression. Our work underscores the importance of Lon in the regulation of complex temporally controlled processes by adjusting the concentrations of critical regulatory proteins. Furthermore, this study includes the first characterization of FliK in C. crescentus and uncovers a dual role of the C-terminal amino acids of FliK in protein function and degradation.


Molecules ◽  
2021 ◽  
Vol 26 (16) ◽  
pp. 4805
Author(s):  
Ana S. Martins ◽  
Ana L. M. Batista de Carvalho ◽  
Maria P. M. Marques ◽  
Ana M. Gil

This paper reports the first metabolomics study of the impact of new chelates Pt2Spm and Pd2Spm (Spm = Spermine) on human osteosarcoma cellular metabolism, compared to the conventional platinum drugs cisplatin and oxaliplatin, in order to investigate the effects of different metal centers and ligands. Nuclear Magnetic Resonance metabolomics was used to identify meaningful metabolite variations in polar cell extracts collected during exposure to each of the four chelates. Cisplatin and oxaliplatin induced similar metabolic fingerprints of changing metabolite levels (affecting many amino acids, organic acids, nucleotides, choline compounds and other compounds), thus suggesting similar mechanisms of action. For these platinum drugs, a consistent uptake of amino acids is noted, along with an increase in nucleotides and derivatives, namely involved in glycosylation pathways. The Spm chelates elicit a markedly distinct metabolic signature, where inverse features are observed particularly for amino acids and nucleotides. Furthermore, Pd2Spm prompts a weaker response from osteosarcoma cells as compared to its platinum analogue, which is interesting as the palladium chelate exhibits higher cytotoxicity. Putative suggestions are discussed as to the affected cellular pathways and the origins of the distinct responses. This work demonstrates the value of untargeted metabolomics in measuring the response of cancer cells to either conventional or potential new drugs, seeking further understanding (or possible markers) of drug performance at the molecular level.


2021 ◽  
Author(s):  
Deike J. Omnus ◽  
Matthias J. Fink ◽  
Klaudia Szwedo ◽  
Kristina Jonas

The highly conserved protease Lon has important regulatory and protein quality control functions in cells from the three domains of life. Despite many years of research on Lon, only few specific protein substrates are known in most organisms. Here, we used a quantitative proteomics approach to identify novel substrates of Lon in the dimorphic bacterium Caulobacter crescentus. We focused our study on proteins involved in polar cell differentiation and investigated the developmental regulator StaR and the flagella hook length regulator FliK as specific Lon substrates in detail. We show that Lon recognizes these proteins at their C-termini, and that Lon-dependent degradation ensures their temporally restricted accumulation in the cell cycle phase when their function is needed. Disruption of this precise temporal regulation of StaR and FliK levels in a Δlon mutant contributes to defects in stalk biogenesis and motility, respectively, revealing a critical role of Lon in coordinating developmental processes with cell cycle progression. Our work underscores the importance of Lon in the regulation of complex temporally controlled processes by adjusting the concentrations of critical regulatory proteins. Furthermore, this study includes the first characterization of FliK in C. crescentus and uncovers a dual role of the C-terminal amino acids of FliK in protein function and degradation.


2020 ◽  
Author(s):  
Jack B. Simmons ◽  
Ruhi S. Humphries ◽  
Stephen R. Wilson ◽  
Scott D. Chambers ◽  
Alastair G. Williams ◽  
...  

Abstract. Aerosol measurements over the Southern Ocean have been identified as critical to an improved understanding of aerosol-radiation and aerosol-cloud interactions, as there currently exists significant discrepancies between model results and measurements in this region. Previous springtime measurements from the East Antarctic seasonal ice zone revealed a significant increase in aerosol number concentrations when crossing the atmospheric polar front into the Polar cell. A return voyage in summer 2017 made a more extensive range of aerosols measurements, including in particular aerosol number concentrations and submicron size distributions. Again, significantly greater aerosol number concentrations were observed in the Polar cell than in the Ferrel cell. Unlike the previous spring voyage however, the polar front was unable to be identified by a step change in aerosol concentration. A possible explanation is that atmospheric mixing across the polar front occurs to a greater degree in summer, therefore weakening the atmospheric boundary at the front. This atmospheric mixing in summer complicates the determination of the polar front location. These changes, together with the increased source of precursors from phytoplankton emissions, are likely to explain the seasonal differences observed in the magnitude of aerosol populations between the Ferrel and Polar cell. In the present analysis, meteorological variables were used to identify different air-masses and then aerosol measurements were compared based on these identifications. CN3 concentrations measured during wind directions indicative of Polar cell airmasses (median 594 cm−3) were larger than those measured during wind directions indicative of Ferrel cell air (median 265 cm−3). CN3 and CCN concentrations were larger during periods where the absolute humidity was less than 4.3 gH2O/m3, indicative of free tropospheric or Antarctic continental airmasses, compared to other periods of the voyage. These results indicate that a persistently more concentrated aerosol population is present in the Polar cell over the East Antarctic seasonal ice zone, although the observed difference between the two cells may vary seasonally.


2020 ◽  
Vol 11 ◽  
Author(s):  
Lifeng Zhao ◽  
Muhammad Saad Rehmani ◽  
Hao Wang

The growing pollen tube has become one of the most fascinating model cell systems for investigations into cell polarity and polar cell growth in plants. Rapidly growing pollen tubes achieve tip-focused cell expansion by vigorous anterograde exocytosis, through which various newly synthesized macromolecules are directionally transported and deposited at the cell apex. Meanwhile, active retrograde endocytosis counter balances the exocytosis at the tip which is believed to recycle the excessive exocytic components for multiple rounds of secretion. Therefore, apical exocytosis and endocytosis are the frontline cellular processes which drive the polar growth of pollen tubes, although they represent opposite vesicular trafficking events with distinct underpinning mechanisms. Nevertheless, the molecular basis governing the spatiotemporal crosstalk and counterbalance of exocytosis and endocytosis during pollen tube polarization and growth remains elusive. Here we discuss recent insight into exocytosis and endocytosis in sculpturing high rates of polarized pollen tube growth. In addition, we especially introduce the novel integration of mathematical modeling in uncovering the mysteries of cell polarity and polar cell growth.


2020 ◽  
Vol 21 (19) ◽  
pp. 7033
Author(s):  
Hui Li ◽  
Jinbo Hu ◽  
Jing Pang ◽  
Liangtao Zhao ◽  
Bing Yang ◽  
...  

ROP (Rho-like GTPases from plants) GTPases are polarly localized key regulators of polar growth in pollen tubes and other cells in plants. However, how ROP GTPases are regulated and how they control polar growth remains to be fully understood. To gain new insights into ROP-dependent mechanisms underlying polar cell growth, we characterized the interactome of ROP1 GTPase that controls Arabidopsis pollen tube (PT) tip growth, an extreme form of polar cell growth. We established an efficient method for culturing Arabidopsis pollen tubes in liquid medium, which was used for immunoprecipitation/mass spectrometry-based identification of ROP1-associated proteins. A total of 654 candidates were isolated from the ROP1 interactome in Arabidopsis pollen tubes, and GO (Gene Ontology) classification and pathway analysis revealed multiple uncharacterized ROP1-dependent processes including translation, cell wall modification, post transcriptional modification, and ion homeostasis, in addition to known ROP1-dependent pathways. The ROP1-interactome data was further supported by the co-expression of the candidate interactors in highly mature pollen with PT germination and growth defects being discovered in 25% (8/32) of the candidate mutant genes. Taken together, our work uncovers valuable information for the identification and functional elucidation of ROP-associated proteins in the regulation of polar growth, and provides a reliable reference to identify critical regulators of polar cell growth in the future.


2020 ◽  
Vol 219 (8) ◽  
Author(s):  
Bernardo Chapa-y-Lazo ◽  
Motonari Hamanaka ◽  
Alexander Wray ◽  
Mohan K. Balasubramanian ◽  
Masanori Mishima

Nearly six decades ago, Lewis Wolpert proposed the relaxation of the polar cell cortex by the radial arrays of astral microtubules as a mechanism for cleavage furrow induction. While this mechanism has remained controversial, recent work has provided evidence for polar relaxation by astral microtubules, although its molecular mechanisms remain elusive. Here, using C. elegans embryos, we show that polar relaxation is achieved through dynein-mediated removal of myosin II from the polar cortexes. Mutants that position centrosomes closer to the polar cortex accelerated furrow induction, whereas suppression of dynein activity delayed furrowing. We show that dynein-mediated removal of myosin II from the polar cortexes triggers a bidirectional cortical flow toward the cell equator, which induces the assembly of the actomyosin contractile ring. These results provide a molecular mechanism for the aster-dependent polar relaxation, which works in parallel with equatorial stimulation to promote robust cytokinesis.


2020 ◽  
Vol 11 (37) ◽  
pp. 10265-10278
Author(s):  
Zhenzhen Wang ◽  
Nikolaus Jork ◽  
Tamara Bittner ◽  
Huanchen Wang ◽  
Henning J. Jessen ◽  
...  

Thermosensitive liposomes were used to deliver inositol pyrophosphates (highly polar, cell-impermeant signaling molecules) into cultured cells; cargo release was induced within 5 min irradiation by a high power, near infra-red, light emitting diode.


ACS Omega ◽  
2019 ◽  
Vol 4 (23) ◽  
pp. 20223-20229 ◽  
Author(s):  
Xixi Wu ◽  
Tao Liu ◽  
Su Gao ◽  
Shuangshuang Chen ◽  
Qinghua Lu

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