scholarly journals Expression levels of candidate circulating microRNAs in pediatric tuberculosis

2020 ◽  
Vol 114 (5) ◽  
pp. 262-270 ◽  
Author(s):  
Kathirvel M ◽  
Saranya S ◽  
Mahadevan S
2018 ◽  
Vol 11 ◽  
pp. 117863101879707 ◽  
Author(s):  
Benet B Dhas ◽  
Vijaya R Dirisala ◽  
B Vishnu Bhat

The high mortality rate of neonatal sepsis is directly connected with time-consuming diagnostic methods that have low sensitivity and specificity. The need of the hour is to develop novel diagnostic techniques that are rapid and more specific. In this study, we estimated the expression levels of circulating microRNAs (miRNAs) that are involved in regulating immune response genes and underlying inflammatory responses, which may be used for sepsis diagnosis. The total circulating miRNA was isolated and the candidate miRNAs (miR-132, miR-146a, miR-155, and miR-223) were quantified by real-time polymerase chain reaction technique. Statistical analysis revealed that miR-132 ( P < .01) and miR-223 ( P < .05) were downregulated in septic newborns compared with healthy babies. The decrease in expression of miR-132 and miR-223 may be associated with increased expression of immune-related genes involved in TLR (Toll-like receptor) signaling pathway. Further case-control studies with large sample size are required to identify the potential of miRNAs in neonatal sepsis diagnosis.


2020 ◽  
Vol 11 (5) ◽  
pp. 464-472
Author(s):  
Alejandra Ortiz-Dosal ◽  
Elvira del Carmen Arellanes-Licea ◽  
Patricia Rodil-García ◽  
Luis A. Salazar-Olivo

AbstractLow birth weight (LBW) and macrosomia have been associated with later-in-life metabolic alterations. The aim of this study was to elucidate whether the expression levels of circulating microRNAs (c-miRNAs) associated with adult metabolic diseases are also dysregulated in newborns with LBW or macrosomia. The expression levels of five microRNAs (miRNAs) associated with metabolic diseases were quantified in dried blood spots of newborns with adequate birth weight, LBW and macrosomia by stem-loop real-time polymerase chain reaction. miR-29a-5p, miR-126-3p, miR-221-3p, and miR-486-5p were significantly overexpressed in newborns with macrosomia and showed no significant change in the LBW group compared to normal weight controls. miR-320a showed no statistical difference among groups. We predicted the putative target genes and pathways of the overexpressed miRNAs with bioinformatic tools. Bioinformatic analyses of overexpressed miRNAs predicted target genes involved in carbohydrate metabolism, participate in FoxO and PI3K/Akt signaling pathways, and are associated with diabetes, obesity, and cardiovascular diseases. The overexpression of circulating miR-29a-5p, miR-126-3p, miR-221-3p, and miR-486-5p may explain the increased risk of obesity and diabetes associated with macrosomia. The use of dried blood spots from newborn screening cards to quantify miRNAs expression levels could be an early and minimally invasive predictive tool for these metabolic alterations.


2021 ◽  
Author(s):  
Mina Tutunfroush ◽  
Saeid Ghorbian ◽  
Jafar Mohseni ◽  
Shahla Danaii

Abstract Recently, circulating microRNAs have attracted much attention because they can serve as reliable non-invasive diagnostic and prognostic biomarkers for pregnancy-related complications. So, this study aimed to quantify miR-23a-3p, miR-101-3p and miR-let-7c expression levels in plasma of patients with idiopathic recurrent pregnancy loss (iRPL) and healthy subjects and to evaluate their potential diagnostic value in iRPL patients. A total of 120 plasma samples were obtained from sixty women with a history of at least two consecutive iRPL and sixty healthy women without a history of miscarriage to evaluate the expression levels of the circulating miR-23a-3p, miR-101-3p and miR-let-7c by quantitative real-time polymerase chain reaction (qPCR) technique. The correlation between studied miRNAs and clinicopathological parameters was also assessed. Receiver operating characteristic (ROC) curve was plotted to determine the diagnostic accuracy of miR-23a-3p, miR-101-3p and miR-let-7c in iRPL. Our results showed that the miR-23a-3p expression level in plasma of iRPL patients was lower than those in healthy controls but without a statistically significant difference (P = 0.113). The expression levels of miR-101-3p and miR-let-7c were significantly downregulated in iRPL patients compared with healthy subjects (P < 0.05). The expression levels of miR-23a-3p and miR-let-7c was negatively correlated with number of abortions in iRPL patients. We observed statistically significant positive correlation between miR-23a-3p and miR-101-3p (r = 0.478, P = 0.001), miR-23a-3p and miR-let-7c (r = 0.561, P = 0.0001), miR-101-3p and miR-let-7c (r = 0.533, P = 0.0001) in patients with iRPL. The current study provides evidence indicating that downregulation of miR-23a-3p, miR-101-3p and miR-let-7c may be associated with iRPL.


2021 ◽  
Vol 66 (2) ◽  
pp. 411-417
Author(s):  
Ewa Moric-Janiszewska ◽  
Sławomir Smolik ◽  
Aleksandra Morka ◽  
Lesław Szydłowski ◽  
Małgorzata Kapral

2019 ◽  
Vol 60 (6) ◽  
pp. 546-558 ◽  
Author(s):  
Tania Ruiz-Vera ◽  
Ángeles C. Ochoa-Martínez ◽  
Lucía G. Pruneda-Álvarez ◽  
Gabriela Domínguez-Cortinas ◽  
Ivan N. Pérez-Maldonado

Author(s):  
Elena Flowers ◽  
Juan-Daniel Ramírez-Mares ◽  
Marion Velazquez-Villafaña ◽  
Ruben Rangel-Salazar ◽  
Anatol Sucher ◽  
...  

Abstract Background Globally, type 2 diabetes is highly prevalent in individuals of Latino ancestry. The reasons underlying this high prevalence are not well understood, but both genetic and lifestyle factors are contributors. Circulating microRNAs are readily detectable in blood and are promising biomarkers to characterize biological responses (i.e., changes in gene expression) to lifestyle factors. Prior studies identified relationships between circulating microRNAs and risk for type 2 diabetes, but Latinos have largely been under-represented in these study samples. Aims/hypothesis The aim of this study was to assess for differences in expression levels of three candidate microRNAs (miR-126, miR-146, miR-15) between individuals who had prediabetes compared to normal glycemic status and between individuals who self-identified with Latino ancestry in the United States (US) and native Mexicans living in or near Leon, Mexico. Methods This was a cross-sectional study that included 45 Mexicans and 21 Latino participants from the US. Prediabetes was defined as fasting glucose 100–125 mg/dL or 2-h post-glucose challenge between 140 and 199 mg/dL. Expression levels of microRNAs from plasma were measured by qPCR. Linear and logistic regression models were used to assess relationships between individual microRNAs and glycemic status or geographic site. Results None of the three microRNAs was associated with risk for type 2 diabetes. MiR-146a and miR-15 were significantly lower in the study sample from Mexico compared to the US. There was a significant interaction between miR-146a and BMI associated with fasting blood glucose. Conclusions/interpretation This study did not replicate in Latinos prior observations from other racial groups of associations between miR-126, miR-146a, and miR-15 and risk for type 2 diabetes. Future studies should consider other microRNAs related to different biological pathways as possible biomarkers for type 2 diabetes in Latinos.


2021 ◽  
Author(s):  
Claudine Seeliger ◽  
Laura Aline Mengel ◽  
Lise Buekens ◽  
Alberto Mesas-Fernández ◽  
Thomas Skurk ◽  
...  

Abstract Cold-induced non-shivering thermogenesis (CIT) of the human body is currently discussed as an important contributor to energy metabolism, and miRNAs have recently been reported as key regulators of metabolism. Identifying the link of CIT and circulating microRNAs (miRNAs) in a large cohort of human individuals remains elusive to date. Here, we analyzed a set of 158 miRNAs in the serum of 97 female and 72 male healthy individuals before and after cold exposure (CE). Validating the results of a miRNA array, a significant down-regulation of miR-375 was measured in individuals after CIT (P<0.0001). These changes went along with a significant negative correlation between miR‑375 and the supraclavicular skin temperature (P=0.012). Additionally, the regulation of miR-375 was sex-dependent, with female individuals showing a significantly stronger decrease in expression of miR-375 under CIT compared to males. Such findings were already seen under thermoneutral conditions, where females display significant lower miR-375 expression levels (P=0.015). Besides, the lower miR‑375 expression levels were negatively correlated with the amount of visceral fat tissue in the female cohort (P=0.0002). This study identified miR-375 as a potential new sex-dependent marker for cold-induced thermogenesis.


2020 ◽  
Vol 22 (1) ◽  
Author(s):  
Jean-Charles Rousseau ◽  
Marjorie Millet ◽  
Martine Croset ◽  
Elisabeth Sornay-Rendu ◽  
Olivier Borel ◽  
...  

Abstract Objectives In the context of the scarcity of biomarkers for knee osteoarthritis (OA), we examined the associations of prevalent and incident OA with the expression levels of serum miRNAs in subjects with and without OA. Methods With a next-generation sequencing approach, we compared the miRome expression of 10 women with knee OA and 10 age-matched healthy subjects. By real-time qPCR, we analyzed the expression levels of 19 miRNAs at baseline selecting 43 women with prevalent knee OA (Kellgren Lawrence score of 2/3), 23 women with incident knee OA over a 4-year follow-up and 67 healthy subjects without prevalent or incident OA matched for age and body mass index. Results Serum miR-146a-5p was significantly increased in the group of prevalent knee OA compared with controls (relative quantification (RQ); median [Interquartile range] 1.12 [0.73; 1.46] vs 0.85 [0.62; 1.03], p = 0.015). The likelihood of prevalent knee OA was significantly increased (odds ratio [95% confidence interval (CI)] 1.83 [1.21–2.77], p = 0.004) for each quartile increase in serum miR-146a-5p. The women with miR-146a-5p levels above the median (0.851) had a higher risk of prevalent knee OA compared to those below the median [95% CI] 4.62 [1.85–11.5], p = 0.001. Moreover, we found a significant association between the baseline level of serum miR-186-5p and the risk of incident knee OA (Q4 vs Q1–3; odds ratio [95% CI] 6.13 [1.14–32.9], p = 0.034). Conclusion We showed for the first time that miR-146a-5p and miR-186-5p are significantly associated with prevalent and incident knee OA, respectively.


Cells ◽  
2021 ◽  
Vol 10 (8) ◽  
pp. 1988
Author(s):  
Alexia Monastirioti ◽  
Chara Papadaki ◽  
Konstantinos Rounis ◽  
Despoina Kalapanida ◽  
Dimitrios Mavroudis ◽  
...  

Circulating microRNAs (miRNAs) are key regulators of the crosstalk between tumor cells and immune response. In the present study, miRNAs (let-7c, miR-26a, miR-30d, miR-98, miR-195, miR-202) reported to be involved in the polarization of macrophages were examined for associations with the outcomes of non-small cell lung cancer (NSCLC) patients (N = 125) treated with first-line platinum-based chemotherapy. RT-qPCR was used to analyze miRNA expression levels in the plasma of patients prior to treatment. In our results, disease progression was correlated with high miR-202 expression (HR: 2.335; p = 0.040). Additionally, high miR-202 expression was characterized as an independent prognostic factor for shorter progression-free survival (PFS, HR: 1.564; p = 0.021) and overall survival (OS, HR: 1.558; p = 0.024). Moreover, high miR-202 independently predicted shorter OS (HR: 1.989; p = 0.008) in the non-squamous (non-SqCC) subgroup, and high miR-26a was correlated with shorter OS in the squamous (SqCC) subgroup (10.07 vs. 13.53 months, p = 0.033). The results of the present study propose that the expression levels of circulating miRNAs involved in macrophage polarization are correlated with survival measures in NSCLC patients, and their role as potential biomarkers merits further investigation.


Blood ◽  
2014 ◽  
Vol 124 (21) ◽  
pp. 708-708
Author(s):  
Steffen Jørgensen ◽  
Dorte Tholstrup ◽  
Jakob Werner Hansen ◽  
Homburg Mikkelsen Keld ◽  
Henrik Hjalgrim ◽  
...  

Abstract Introduction MicroRNAs are small regulatory RNAs which have been shown to be deregulated in a wide variety of human cancers, including different types of B-cell lymphoma. Circulating microRNAs can be isolated from plasma and are promising biomarkers for early detection of B-cell lymphomas. The Danish Blood Donor Study (DBDS) was initiated in 2010 and has currently enrolled more than 90,000 blood donors. Plasma repositories are kept from every blood donation allowing the study of biomarkers up to 5 years ahead of disease development. The aim of the present study was to determine whether it is possible to detect alterations in expression profile of specific microRNAs one year before diagnosis of B-cell lymphoma using plasma repositories from healthy blood donors. Methods The study was done on plasma samples taken at the time of diagnosis from 17 diffuse large B-cell lymphoma (DLBCL) patients and on plasma repository samples from 13 DBDS blood donors drawn up to more than a year before they were diagnosed with B-cell lymphoma. DBDS cases with B-cell lymphoma were identified among the first 40,000 participating donors using public registries and the diagnoses were confirmed by medical records (Table 1). The expression levels of 184 different circulating microRNAs were determined in plasma from the 17 DLBCL patients and 14 age-matched healthy controls in order to design a B-cell lymphoma specific microRNA panel. This custom microRNA panel was subsequently tested on plasma repository samples from the 13 cases of B-cell lymphoma and 14 age-matched healthy controls. All plasma samples from DBDS cases and controls were isolated, frozen, stored, and trawled the same way. Total RNA, including microRNAs, was extracted from plasma using MiRNeasy Serum/Plasma kit (Qiagen) and the expression levels were determined by Real Time RT-PCR using Serum/Plasma Focus microRNA PCR Panel (Exiqon) and Custom Pick-&-Mix microRNA PCR Panels (Exiqon). The relative expression levels of microRNA in plasma were analyzed using the ΔCt method. For normalization mir-23a and Let-7d-3p were used in addition to UniSP3 inter plate calibrator. Results 32 microRNAs were more than 3 fold up- or down-regulated in plasma when comparing patients with DLBCL to healthy blood donors. The following microRNA were most significantly down-regulated (mir-17-92 cluster, mir-10b, mir-190a, mir-346, mir-363, mir-205) or up-regulated (mir-326, mir-328, mir-33a) (Table 2). Applying the same microRNA profile in a customized panel to plasma samples from donors that were diagnosed with B-cell lymphoma revealed that the B-cell lymphoma specific pattern could be identified in all donor samples at the time of their last donation. Thus, B-cell lymphoma specific microRNAs were detected in plasma more than a year prior to diagnosis. Conclusion This first study of circulating microRNA in plasma taken from healthy individuals more than a year ahead of their diagnosis of B-cell lymphoma indicates that it is feasible to develop early and non-invasive tools for diagnosis of this disease. Table 1 Blood donors that developed B-cell lymphoma. Diagnosis Number of blood donors Interval between last donation and diagnosis (range in days) Follicular lymphoma 4 39 – 384 days DLBCL 8 56 – 698 days Hodgkin lymphoma 1 138 days Table 2 Up- and down-regulated microRNAs in plasma from DLBCL patients compared to healthy controls. MicroRNA Fold change P-Value hsa-miR-326 51,67547 1,00E-08 hsa-miR-92a-3p -5,03677 1,00E-08 hsa-miR-363-3p -7,80529 5,30E-08 hsa-miR-10b-5p -12,89477 7,90E-08 hsa-miR-19b-3p -5,14066 1,59E-07 hsa-miR-328 5,90068 3,73E-07 hsa-miR-205-5p -39,20498 4,12E-07 hsa-miR-19a-3p -4,97523 1,10E-06 hsa-miR-33a-5p 10,51611 3,04E-06 hsa-miR-190a -8,69103 2,69E-05 hsa-miR-20a-3p -10,94205 4,15E-05 Positive values indicate up-regulated and negative values down-regulated microRNAs. Disclosures No relevant conflicts of interest to declare.


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