Evaluation of Proposed Amended Names of Several Pseudomonads and Xanthomonads and Recommendations

In 1980, over 90% of all plant-pathogenic pseudomonads and xanthomonads were lumped into Pseudomonas syringae and Xanthomonas campestris, respectively, as pathovars. The term “pathovar” was created to preserve the name of plant pathogens, but has no official standing in nomenclature. Proposals to elevate and rename several pathovars of the genera Pseudomonas and Xanthomonas to the rank of species has caused great confusion in the literature. We believe the following changes have merit and expect to adopt them for publication in a future American Phytopathological Society Laboratory Guide for Identification of Plant Pathogenic Bacteria. Upon review of published data and the Rules of The International Code of Nomenclature of Bacteria, we make the following recommendations. We reject the proposal to change the name of P. syringae pvs. phaseolicola and glycinea to P. savastanoi pvs. phaseolicola and glycinea, respectively, because both pathogens are easily differentiated phenotypically from pv. savastanoi and convincing genetic data to support such a change are lacking. We accept the elevation of P. syringae pv. savastanoi to the rank of species. We accept the reinstatement of X. oryzae to the rank of species with the inclusion of X. oryzicola as a pathovar of X. oryzae and we accept the species X. populi. We agree with the elevation of the pvs. cassavae, cucurbitae, hyacinthi, pisi, and translucens to the rank of species but not pvs. melonis, theicola, and vesicatoria type B. We recommend that all type A X. vesicatoria be retained as X. campestris pv. vesicatoria and all type B X. vesicatoria be named X. exitiosa. We reject the newly proposed epithets arboricola, bromi, codiaei (poinsettiicola type B), hortorum, sacchari, and vasicola and the transfer of many pathovars of X. campestris to X. axonopodis. The proposed pathovars of X. axonopodis should be retained as pathovars of X. campestris.

Download Full-text

Effects of Pesticides on the Reduction of Plant and Human Pathogenic Bacteria in Application Water

Journal of Food Protection ◽

10.4315/0362-028x.jfp-12-440 ◽

2013 ◽

Vol 76 (4) ◽

pp. 719-722 ◽

Cited By ~ 3

Author(s):

MICHAEL MAHOVIC ◽

GANYU GU ◽

STEVEN RIDEOUT

Keyword(s):

Pseudomonas Syringae ◽

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Plant Pathogens ◽

Erwinia Carotovora ◽

Noticeable Effect ◽

Tomato Production ◽

Initial Application ◽

Treated Plant

Overhead spray applications of in-field tomato treatments dissolved in aqueous solutions have specific pest targets (fungal, bacterial, insect, or other). Any organism present in the solution or on treated plant surfaces that is not a specific target of the application is unlikely inactivated and can instead be spread through the phyllosphere. In this laboratory study, commercially labeled pesticides (including Actigard 50WG, Bravo Weather Stik 6F, Cabrio 20EG, Kasumin, Kocide 3000 46WG, Oxidate 27L, Penncozeb 75DF, ProPhyt 54.5L, Stimplex 100L, Firewall, 22.4WP, and Tanos 50DF) in common use in commercial tomato production fields of the Eastern Shore of Virginia were investigated for activity against in vitro bacterial contamination of pesticide application waters. Pesticides of interest were tank mixed individually with one of the plant pathogens Ralstonia solanacearum, Xanthomonas campestris pv. vesicatoria, Pseudomonas syringae pv. tomato, Erwinia carotovora subsp. carotovora, or one of two serovars (Newport and Montevideo) of the human pathogen Salmonella enterica to assess reduction values during the average time between mixing and initial application. Observations suggested that while some treatments had a noticeable effect on population levels, only the oxidizer, peroxyacetic acid, showed significant and consistent levels of suppression against all bacteria investigated, at levels that could have practical implications.

Download Full-text

Tulbaghia violacea L. I: In vitro antimicrobial properties towards plant pathogens

Australian Journal of Agricultural Research ◽

10.1071/ar05206 ◽

2006 ◽

Vol 57 (5) ◽

pp. 511 ◽

Cited By ~ 12

Author(s):

Leeto Nteso ◽

Johan C. Pretorius

Keyword(s):

Pseudomonas Syringae ◽

Mycelial Growth ◽

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Plant Pathogens ◽

Antimicrobial Properties ◽

Diffusion Method ◽

Mycosphaerella Pinodes ◽

Soil Extracts

The antimicrobial properties of crude methanol extracts of above- and below-soil parts of Tulbaghia violacea were quantified by means of an agar diffusion method against 6 plant pathogenic bacteria and 7 fungi. The growth of 3 out of the 6 bacteria, Clavibacter michiganensis, Ralstonia solanacearum, and Xanthomonas campestris, was significantly inhibited by crude extracts of both below-soil and aerial parts of T. violacea, whereas the growth of Pseudomonas syringae, Erwinia carotovora, and Agrobacterium tumefaciens was unaffectedl. Compared with the standard fungicide, both the aerial and below-soil extracts of T. violacea significantly inhibited the mycelial growth of 6 of the 7 test fungi, Botrytis cinerea, Sclerotium rolfsii, Rhizoctonia solani, Mycosphaerella pinodes, Botryosphaeria dothidea, and P. ultimum, whereas only the below-soil extract inhibited the mycelial growth of Fusarium oxysporum significantly. The broad-spectrum antifungal activity shown by the crude T. violaceae extracts supplied a rationale for a further investigation into the in vivo activity of the extracts under glasshouse and field conditions.

Download Full-text

Antibiotic Resistance in Plant-Pathogenic Bacteria

Annual Review of Phytopathology ◽

10.1146/annurev-phyto-080417-045946 ◽

2018 ◽

Vol 56 (1) ◽

pp. 161-180 ◽

Cited By ~ 48

Author(s):

George W. Sundin ◽

Nian Wang

Keyword(s):

Antibiotic Resistance ◽

Pseudomonas Syringae ◽

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Plant Pathogens ◽

Management Strategies ◽

Resistance Management ◽

Plant Diseases ◽

Plant Pathogenic Bacteria ◽

Continued Use

Antibiotics have been used for the management of relatively few bacterial plant diseases and are largely restricted to high-value fruit crops because of the expense involved. Antibiotic resistance in plant-pathogenic bacteria has become a problem in pathosystems where these antibiotics have been used for many years. Where the genetic basis for resistance has been examined, antibiotic resistance in plant pathogens has most often evolved through the acquisition of a resistance determinant via horizontal gene transfer. For example, the strAB streptomycin-resistance genes occur in Erwinia amylovora, Pseudomonas syringae, and Xanthomonas campestris, and these genes have presumably been acquired from nonpathogenic epiphytic bacteria colocated on plant hosts under antibiotic selection. We currently lack knowledge of the effect of the microbiome of commensal organisms on the potential of plant pathogens to evolve antibiotic resistance. Such knowledge is critical to the development of robust resistance management strategies to ensure the safe and effective continued use of antibiotics in the management of critically important diseases.

Download Full-text

In VitroActivity of Glucosinolates and Their Degradation Products against Brassica-Pathogenic Bacteria and Fungi

Applied and Environmental Microbiology ◽

10.1128/aem.03142-14 ◽

2014 ◽

Vol 81 (1) ◽

pp. 432-440 ◽

Cited By ~ 39

Author(s):

T. Sotelo ◽

M. Lema ◽

P. Soengas ◽

M. E. Cartea ◽

P. Velasco

Keyword(s):

Pseudomonas Syringae ◽

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Degradation Products ◽

Allyl Isothiocyanate ◽

Leaf Extracts ◽

Soil Pathogens ◽

Content Type ◽

Positive Effects

ABSTRACTGlucosinolates (GSLs) are secondary metabolites found inBrassicavegetables that confer on them resistance against pests and diseases. Both GSLs and glucosinolate hydrolysis products (GHPs) have shown positive effects in reducing soil pathogens. Information about theirin vitrobiocide effects is scarce, but previous studies have shown sinigrin GSLs and their associated allyl isothiocyanate (AITC) to be soil biocides. The objective of this work was to evaluate the biocide effects of 17 GSLs and GHPs and of leaf methanolic extracts of different GSL-enrichedBrassicacrops on suppressingin vitrogrowth of two bacterial (Xanthomonas campestrispv. campestris andPseudomonas syringaepv. maculicola) and two fungal (AlternariabrassicaeandSclerotiniascletoriorum)Brassicapathogens. GSLs, GHPs, and methanolic leaf extracts inhibited the development of the pathogens tested compared to the control, and the effect was dose dependent. Furthermore, the biocide effects of the different compounds studied were dependent on the species and race of the pathogen. These results indicate that GSLs and their GHPs, as well as extracts of differentBrassicaspecies, have potential to inhibit pathogen growth and offer new opportunities to study the use ofBrassicacrops in biofumigation for the control of multiple diseases.

Download Full-text

Genomic insights advance the fight against black rot of crucifers

Journal of General Plant Pathology ◽

10.1007/s10327-021-00987-x ◽

2021 ◽

Vol 87 (3) ◽

pp. 127-136

Author(s):

Zoë E. Dubrow ◽

Adam J. Bogdanove

Keyword(s):

Virulence Factors ◽

Xanthomonas Campestris ◽

Plant Pathogens ◽

Impact Resistance ◽

Resistance Breeding ◽

Genetic Data ◽

Black Rot ◽

Inoculum Sources ◽

New Knowledge ◽

The World

AbstractXanthomonas campestris pv. campestris, the causal agent of black rot of crucifers, was one of the first bacterial plant pathogens ever identified. Over 130 years later, black rot remains a threat to cabbage, cauliflower, and other Brassica crops around the world. Recent genomic and genetic data are informing our understanding of X. campestris taxonomy, dissemination, inoculum sources, and virulence factors. This new knowledge promises to positively impact resistance breeding of Brassica varieties and management of inoculum sources.

Download Full-text

Apis andreniformis associated Actinomycetes show antimicrobial activity against black rot pathogen (Xanthomonas campestris pv. campestris)

PeerJ ◽

10.7717/peerj.12097 ◽

2021 ◽

Vol 9 ◽

pp. e12097

Author(s):

Yaowanoot Promnuan ◽

Saran Promsai ◽

Wasu Pathom-aree ◽

Sujinan Meelai

Keyword(s):

Antimicrobial Activity ◽

16S Rrna ◽

16S Rrna Gene ◽

Honey Bee ◽

Pseudomonas Syringae ◽

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Rrna Gene ◽

Apis Andreniformis

This study aimed to investigate cultivable actinomycetes associated with rare honey bee species in Thailand and their antagonistic activity against plant pathogenic bacteria. Actinomycetes were selectively isolated from the black dwarf honey bee (Apis andreniformis). A total of 64 actinomycete isolates were obtained with Streptomyces as the predominant genus (84.4%) followed by Micromonospora (7.8%), Nonomuraea (4.7%) and Actinomadura (3.1%). All isolates were screened for antimicrobial activity against Xanthomonas campestris pv. campestris, Pectobacterium carotovorum and Pseudomonas syringae pv. sesame. Three isolates inhibited the growth of X. campestris pv. campestris during in vitro screening. The crude extracts of two isolates (ASC3-2 and ASC5-7P) had a minimum inhibitory concentration (MIC) of 128 mg L−1against X. campestris pv. campestris. For isolate ACZ2-27, its crude extract showed stronger inhibitory effect with a lower MIC value of 64 mg L−1 against X. campestris pv. campestris. These three active isolates were identified as members of the genus Streptomyces based on their 16S rRNA gene sequences. Phylogenetic analysis based on the maximum likelihood algorithm showed that isolate ACZ2-27, ASC3-2 and ASC5-7P were closely related to Streptomyces misionensis NBRC 13063T (99.71%), Streptomyces cacaoi subsp. cacaoi NBRC 12748T (100%) and Streptomyces puniceus NBRC 12811T (100%), respectively. In addition, representative isolates from non-Streptomyces groups were identified by 16S rRNA gene sequence analysis. High similarities were found with members of the genera Actinomadura, Micromonospora and Nonomuraea. Our study provides evidence of actinomycetes associated with the black dwarf honey bee including members of rare genera. Antimicrobial potential of these insect associated Streptomyces was also demonstrated especially the antibacterial activity against phytopathogenic bacteria.

Download Full-text

XopC and XopJ, Two Novel Type III Effector Proteinsfrom Xanthomonas campestris pv.vesicatoria

Journal of Bacteriology ◽

10.1128/jb.185.24.7092-7102.2003 ◽

2003 ◽

Vol 185 (24) ◽

pp. 7092-7102 ◽

Cited By ~ 65

Author(s):

Laurent Noël ◽

Frank Thieme ◽

Jana Gäbler ◽

Daniela Büttner ◽

Ulla Bonas

Keyword(s):

Pseudomonas Syringae ◽

Plant Cell ◽

Type Iii Secretion ◽

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Effector Proteins ◽

Type Iii ◽

Genome Wide ◽

A Genome ◽

Xanthomonas Campestris Pv.Vesicatoria

ABSTRACT Pathogenicity of the gram-negative plant pathogen Xanthomonas campestris pv. vesicatoria depends on a type III secretion (TTS) system which translocates bacterial effector proteins into the plant cell. Previous transcriptome analysis identified a genome-wide regulon of putative virulence genes that are coexpressed with the TTS system. In this study, we characterized two of these genes, xopC and xopJ. Both genes encode Xanthomonas outer proteins (Xops) that were shown to be secreted by the TTS system. In addition, type III-dependent translocation of both proteins into the plant cell was demonstrated using the AvrBs3 effector domain as a reporter. XopJ belongs to the AvrRxv/YopJ family of effector proteins from plant and animal pathogenic bacteria. By contrast, XopC does not share significant homology to proteins in the database. Sequence analysis revealed that the xopC locus contains several features that are reminiscent of pathogenicity islands. Interestingly, the xopC region is flanked by 62-bp inverted repeats that are also associated with members of the Xanthomonas avrBs3 effector family. Besides xopC, a second gene of the locus, designated hpaJ, was shown to be coexpressed with the TTS system. hpaJ encodes a protein with similarity to transglycosylases and to the Pseudomonas syringae pv. maculicola protein HopPmaG. HpaJ secretion and translocation by the X. campestris pv. vesicatoria TTS system was not detectable, which is consistent with its predicted Sec signal and a putative function as transglycosylase in the bacterial periplasm.

Download Full-text

Azospirillum plant growth-promoting strains are nonpathogenic on tomato, pepper, cotton, and wheat

Canadian Journal of Microbiology ◽

10.1139/w97-136 ◽

1998 ◽

Vol 44 (2) ◽

pp. 168-174 ◽

Cited By ~ 20

Author(s):

Yoav Bashan

Keyword(s):

Plant Growth ◽

Plant Species ◽

Pseudomonas Syringae ◽

Xanthomonas Campestris ◽

Plant Pathogens ◽

Dry Weight ◽

Plant Growth Promoting Bacteria ◽

Disease Symptoms ◽

Plant Growth Promoting ◽

Growth Promoting

Six strains of Azospirillum belonging to five species of plant growth-promoting bacteria (A. brasilense, A. lipoferum, A. amazonense, A. irakense, and A. halopraeference) did not cause visible disease symptoms on the roots or leaves of tomato, pepper, cotton, and wheat, failed to inhibit seed germination, and did not reduce plant dry weight when seven standard techniques for the inoculation of plant pathogens were used. Similar inoculation conditions with plant pathogens (Pseudomonas syringae pv. tomato, Xanthomonas campestris pv. vesicatoria, Xanthomonas campestris pv. translucens, and Xanthomonas campestris pv. malvacearum) induced typical disease symptoms. None of Azospirillum strains caused the hypersensitive reaction on eggplant, whereas all pathogens did. All Azospirillum strains increased phytoalexin production in all disease-resistant plant species to moderate levels, but the levels were significantly lower than those induced by the compatible pathogens. The various phytoalexins produced in plants had the capacity to inhibit growth of all Azospirillum strains. Azospirillum amazonense, A. irakense, and A. halopraeference had no apparent effect on plant growth, while A. brasilense and A. lipoferum increased the dry weight of all plant species. Under partial mist conditions, all Azospirillum strains were capable of colonizing leaf surfaces (103-107 cfu/g dry weight) regardless of the plant species. These results provide experimental evidence that Azospirillum sp. might be considered safe for the inoculation of several plant species.Key words: Azospirillum, beneficial bacteria, environmental protection, plant inoculation, plant growth-promoting bacteria.

Download Full-text

PAMDB, A Multilocus Sequence Typing and Analysis Database and Website for Plant-Associated Microbes

Phytopathology ◽

10.1094/phyto-100-3-0208 ◽

2010 ◽

Vol 100 (3) ◽

pp. 208-215 ◽

Cited By ~ 124

Author(s):

Nalvo F. Almeida ◽

Shuangchun Yan ◽

Rongman Cai ◽

Christopher R. Clarke ◽

Cindy E. Morris ◽

...

Keyword(s):

Pseudomonas Syringae ◽

Multilocus Sequence Typing ◽

Pathogenic Bacteria ◽

Plant Pathogens ◽

Web Interface ◽

Associated Bacteria ◽

Biologically Relevant ◽

Molecular Approaches ◽

Using Data ◽

Scalable Design

Although there are adequate DNA sequence differences among plant-associated and plant-pathogenic bacteria to facilitate molecular approaches for their identification, identification at a taxonomic level that is predictive of their phenotype is a challenge. The problem is the absence of a taxonomy that describes genetic variation at a biologically relevant resolution and of a database containing reference strains for comparison. Moreover, molecular evolution, population genetics, ecology, and epidemiology of many plant-pathogenic and plant-associated bacteria are still poorly understood. To address these challenges, a database with web interface was specifically designed for plant-associated and plant-pathogenic microorganisms. The Plant-Associated Microbes Database (PAMDB) comprises, thus far, data from multilocus sequence typing and analysis (MLST/MLSA) studies of Acidovorax citrulli, Pseudomonas syringae, Ralstonia solanacearum, and Xanthomonas spp. Using data deposited in PAMDB, a robust phylogeny of Xanthomonas axonopodis and related bacteria has been inferred, and the diversity existing in the Xanthomonas genus and in described Xanthomonas spp. has been compared with the diversity in P. syringae and R. solanacearum. Moreover, we show how PAMDB makes it easy to distinguish between different pathogens that cause almost identical diseases. The scalable design of PAMDB will make it easy to add more plant pathogens in the future.

Download Full-text

First Report of Black Rot of Cauliflower and Kale Caused by Xanthomonas campestris pv. campestris in Yugoslavia

Plant Disease ◽

10.1094/pdis.1999.83.10.965b ◽

1999 ◽

Vol 83 (10) ◽

pp. 965-965 ◽

Cited By ~ 3

Author(s):

A. Obradović ◽

M. Arsenijević

Keyword(s):

Xanthomonas Campestris ◽

Pathogenic Bacteria ◽

Black Rot ◽

Triphenyl Tetrazolium Chloride ◽

American Phytopathological Society ◽

Tetrazolium Chloride ◽

Gram Negative ◽

First Occurrence ◽

Dark Green ◽

Xanthomonas Campestris Pv Campestris

In Yugoslavia, Xanthomonas campestris pv. campestris was isolated from forage kale in 1964 and cabbage in 1997 (1). Recently, the incidence and severity of black rot symptoms on cabbage, cauliflower, and kale have increased. Gram-negative, rod-shaped, motile bacteria were isolated from the diseased leaf and vascular tissues of cauliflower and kale plants collected from 1995 to 1998. The isolates formed yellow, convex, mucoid colonies on yeast dextrose chalk medium, metabolized glucose oxidatively, grew at 37°C, hydrolyzed gelatin and esculin, produced acids from d-arabinose, glucose, sucrose, and trehalose, and did not reduce nitrates. They were nonfluorescent, amylolytic and pectolytic, oxidase negative and catalase positive, and tolerant to 5% NaCl but not to 0.1% triphenyl tetrazolium chloride. Koch's postulates were completed by injecting bacterial suspensions (108 CFU/ml) into leaf petioles of cabbage, cauliflower, and kale seedlings (2- to 3-leaf stage). Dark green watersoaking of petioles and leaf veins followed by yellowing and collapse of inoculated plants was observed after 3 to 5 days. When compared with published information (2), the isolates were identified as X. campestris pv. campestris. This is the first occurrence of this bacterium in cauliflower and kale in Yugoslavia. References: (1) O. Jovanovic et al. Plant Prot. Belgrade 221:175, 1997. (2) N. W. Schaad. 1988. Laboratory Guide for Identification of Plant Pathogenic Bacteria. 2nd ed. The American Phytopathological Society, St. Paul, MN.

Download Full-text