scholarly journals Toward Coalescing Gene Expression and Function with QTLs of Water-Deficit Stress in Cotton

2015 ◽  
Vol 2015 ◽  
pp. 1-11 ◽  
Author(s):  
Hirut Kebede ◽  
Paxton Payton ◽  
Hanh Thi My Pham ◽  
Randy D. Allen ◽  
Robert J. Wright

Cotton exhibits moderately high vegetative tolerance to water-deficit stress but lint production is restricted by the available rainfed and irrigation capacity. We have described the impact of water-deficit stress on the genetic and metabolic control of fiber quality and production. Here we examine the association of tentative consensus sequences (TCs) derived from various cotton tissues under irrigated and water-limited conditions with stress-responsive QTLs. Three thousand sixteen mapped sequence-tagged-sites were used as anchored targets to examine sequence homology with 15,784 TCs to test the hypothesis that putative stress-responsive genes will map within QTLs associated with stress-related phenotypic variation more frequently than with other genomic regions not associated with these QTLs. Approximately 1,906 of 15,784 TCs were mapped to the consensus map. About 35% of the annotated TCs that mapped within QTL regions were genes involved in an abiotic stress response. By comparison, only 14.5% of the annotated TCs mapped outside these QTLs were classified as abiotic stress genes. A simple binomial probability calculation of this degree of bias being observed if QTL and non-QTL regions are equally likely to contain stress genes was P(x ≥ 85)=7.99  × 10−15. These results suggest that the QTL regions have a higher propensity to contain stress genes.

2016 ◽  
Vol 69 (3) ◽  
Author(s):  
Andrzej Gawlik ◽  
Dorota Gołębiowska ◽  
Danuta Kulpa ◽  
Romualda Bejger ◽  
Renata Matuszak-Slamani ◽  
...  

A laboratory research was carried out to examine the impact of humic acids (HA) on swelling and germination of ‘Nawiko’ and ‘Progres’ soybean seeds under salt stress (50 mM dm<sup>−3</sup> NaCl) and water deficit stress (−0.5 MPa) induced by polyethylene glycol (PEG) 6000. HA in the form of a dry preparation was obtained from peat using the IHSS method. Tests on swelling and germination used non-fractionate preparation (NFHA) and two of its molecular fractions obtained using Millipore filters with a 30 kDa cut-off point. This enabled us to obtain two fractions: with a higher molecular weight, above 30 kDa (HMHA), and a lower molecular weight, below 30 kDa (LMHA). The carbon concentration in HA solutions, used in all tests, was 0.005 g C<span><sub>HA</sub></span> dm<sup>−3</sup>. The results showed that HA mitigate the negative impact of salinity and water deficit on swelling and germination of soybean seeds.


OENO One ◽  
2019 ◽  
Vol 53 (3) ◽  
Author(s):  
Thibaut Scholasch ◽  
Markus Rienth

The increasing risk of water deficit stress due to global warming subjects winegrowers of traditional rain fed viticulture regions to new challenges regarding vine water status assessment and possible drought mitigation strategies, such as irrigation.This review summarizes the most recent studies on the impact of water deficit stress on vine and berry physiology; it discusses the latest scientific advances regarding hormonal and hydraulic regulation and segmentation and addresses the current debate on iso/an-isohydricity within vine cultivars. Latest literature on irrigation frequency, water stress memory and the impact of abiotic factors such as VPD (Vapor Pressure Deficit), radiation, temperature and canopy architecture on vine physiology and water use, raise important questions on water status assessment and the implementation of irrigation strategies. Practical consequences regarding the effects of vine water regime on vine water regulatory mechanisms are discussed. Recent technical and scientific advances shed new light on how site specific irrigation strategies matching production objectives could improve vineyard water use.


2016 ◽  
Vol 69 (4) ◽  
Author(s):  
Magdalena Jastrzębska ◽  
Marta K. Kostrzewska ◽  
Maria Wanic ◽  
Kinga Treder ◽  
Przemysław Makowski

<p>A pot experiment was conducted in a greenhouse in Olsztyn, Poland, in the period 2010–2012. The aim of the study was to examine whether soil water deficit would change biomass volume and distribution of pure sown spring barley and red clover as well as growth rate during their joint vegetation and mutual interactions. The interactions between spring barley and red clover were of a competitive character, and the cereal was the stronger crop. The strength of this competition increased in time with the growing season. Through most of the growing season, the competition was poorer in water deficit conditions.</p><p>The impact of clover on barley before the heading stage showed facilitation symptoms. Interspecific competition reduced the rate of barley biomass accumulation and decreased stem and leaf biomass towards the end of the growing season. Intensified translocation of assimilates from the vegetative parts to grain minimized the decrease in spike biomass.</p><p>Water deficit stress had a more inhibitory effect on the biomass and growth rate of barley than competition, and competition did not exacerbate the adverse influence of water deficit stress on barley. Competition from barley significantly reduced the biomass and biomass accumulation rate of clover. Water deficit stress did not exacerbate barley’s competitive effect on clover, but it strongly inhibited the growth of aboveground biomass in pure-sown clover.</p>


2016 ◽  
Vol 1 (13) ◽  
pp. 162-168
Author(s):  
Pippa Hales ◽  
Corinne Mossey-Gaston

Lung cancer is one of the most commonly diagnosed cancers across Northern America and Europe. Treatment options offered are dependent on the type of cancer, the location of the tumor, the staging, and the overall health of the person. When surgery for lung cancer is offered, difficulty swallowing is a potential complication that can have several influencing factors. Surgical interaction with the recurrent laryngeal nerve (RLN) can lead to unilateral vocal cord palsy, altering swallow function and safety. Understanding whether the RLN has been preserved, damaged, or sacrificed is integral to understanding the effect on the swallow and the subsequent treatment options available. There is also the risk of post-surgical reduction of physiological reserve, which can reduce the strength and function of the swallow in addition to any surgery specific complications. As lung cancer has a limited prognosis, the clinician must also factor in the palliative phase, as this can further increase the burden of an already compromised swallow. By understanding the surgery and the implications this may have for the swallow, there is the potential to reduce the impact of post-surgical complications and so improve quality of life (QOL) for people with lung cancer.


2011 ◽  
Vol 21 (3) ◽  
pp. 112-117 ◽  
Author(s):  
Elizabeth Erickson-Levendoski ◽  
Mahalakshmi Sivasankar

The epithelium plays a critical role in the maintenance of laryngeal health. This is evident in that laryngeal disease may result when the integrity of the epithelium is compromised by insults such as laryngopharyngeal reflux. In this article, we will review the structure and function of the laryngeal epithelium and summarize the impact of laryngopharyngeal reflux on the epithelium. Research investigating the ramifications of reflux on the epithelium has improved our understanding of laryngeal disease associated with laryngopharyngeal reflux. It further highlights the need for continued research on the laryngeal epithelium in health and disease.


1998 ◽  
Vol 21 (1) ◽  
pp. 1-28
Author(s):  
John A Atkinson ◽  
Camilla Dickson ◽  
Jane Downes ◽  
Paul Robins ◽  
David Sanderson

Summary Two small burnt mounds were excavated as part of the programme to mitigate the impact of motorway construction in the Crawford area. The excavations followed a research strategy designed to address questions of date and function. This paper surveys the various competing theories about burnt mounds and how the archaeological evidence was evaluated against those theories. Both sites produced radiocarbon dates from the Bronze Age and evidence to suggest that they were cooking places. In addition, a short account is presented of two further burnt mounds discovered during the construction of the motorway in Annandale.


2014 ◽  
Vol 1 (1) ◽  
pp. 20-24
Author(s):  
Gader Ghaffari ◽  
Farhad Baghbani ◽  
Behnam Tahmasebpour

In order to group winter rapeseed cultivars according to evaluated traits, an experiment was conducted in the Research Greenhouse of Agriculture Faculty, University of Tabriz - IRAN. In the experiment were included 12 cultivars of winter rapeseed and 3 levels of water deficit stress. Gypsum blocks were used to monitor soil moisture. Water deficit stress was imposed from stem elongation to physiological maturity. According to the principal component analysis, five principal components were chosen with greater eigenvalue (more than 0.7) that are including 81.34% of the primeval variance of variables. The first component that explained the 48.02% of total variance had the high eigenvalue. The second component could justify about 13.64% of total variance and had positive association with leaf water potential and proline content and had negative relationship with leaf stomatal conductivity. The third, fourth and fifth components expressed around, 10.18, 4.83 and 4.68% of the total variance respectively. The third component had the high eigenvalue for plant dry weight. The fourth component put 1000-seed weight, seed yield, Silique per Plant and root dry weight against plant dry weight, chlorophyll fluorescence and leaf water potential. The fifth component had the high eigenvalue for root dry weight, root volume and 1000-seed weight.


2020 ◽  
Vol 56 (2) ◽  
pp. 119-122
Author(s):  
Doris Adams Hill ◽  
Theoni Mantzoros ◽  
Jonté C. Taylor

Special educators are often considered the experts in their school when it comes to developing functional behavior assessments (FBA) and behavior intervention plans (BIP), yet rarely are they trained much beyond basic antecedents, behaviors, and consequences (ABC). This column discusses concepts that will expand special education professionals’ knowledge to make better decisions regarding interventions for the students they serve. Specifically, the focus is on motivating operations (MO) and function-based interventions and the implications of these on behavior. Knowledge of the concept of MOs can enhance a teacher’s ability to provide evidence-based interventions and more fully developed behavioral interventions for students in their purview.


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