Genetic, cytogenetic and morphological diversity in Helicrysum leucocephalum (Asteraceae) populations

Biologia ◽  
2014 ◽  
Vol 69 (5) ◽  
Author(s):  
Narjes Azizi ◽  
Masoud Sheidai ◽  
Valeyollah Mozafarian ◽  
Zahra Noormohammadi

AbstractHelichrysum (family Asteraceae) is a large, heterogeneous and polyphyletic genus. Most of the Helichrysum species have ornamental and medicinal values. Helicrysum leucocephalum Boiss., has wide geographical distribution in Iran and forms several local populations. The present investigation was performed to study inter populations, genetic, cytogenetic and morphological diversity of this medicinal species. The AMOVA test showed significant genetic difference among the studied populations but the Mantel test did not show correlation between the genetic distance and geographical distance of these populations. STRUCTURE and reticulation analyses showed some degree of genetic admixture and gene exchange among the studied populations. These populations had different chromosome numbers and also differed significantly in the size of their chromosomes.

Biologia ◽  
2015 ◽  
Vol 70 (10) ◽  
Author(s):  
Masoud Sheidai ◽  
Samira Sadeghi ◽  
Mahnaz-Arab Ameri ◽  
Ahmad-Reza Mehrabeian

AbstractThe present study aimed to reveal genetic diversity and population structure in three Onosma species i.e., Onosma bulbotrichum DC., O. elwendicum Wettst. and O. sericeum Willd. (Boraginaceae) growing in Iran. This study was performed to check if the ISSR molecular markers could be used in the Onosma species delimitation. We also investigated the infra-specific morphological variability and if we can identify infra-species taxonomic forms. The present study revealed within species genetic and morphological diversity. ISSR data could delimit the studied species as they were separated from each other in NJ tree, maximum parsimony and STRUCTURE analysis. AMOVA and Hickory tests produced significant genetic difference among the studied species. The Mantel test showed no correlation between genetic distance and geographical distance of the populations for all three species. Reticulation analysis and Nm estimation showed gene flow among these populations. We could identify a few ISSR loci that are adaptive. Data obtained can be used in conservation of these medicinal plants in Iran.


Genetika ◽  
2020 ◽  
Vol 52 (1) ◽  
pp. 199-213
Author(s):  
Neda Atazadeh ◽  
Masoud Sheidai ◽  
Farideh Attar ◽  
Fahimeh Koohdar

The genus Cousinia Cass. of the tribe Cardueae with about 700 species is one of the most diverse genera in Central and SW Asia following Senecio and Vernonia. The section Cynaroideae with 89 species is the largest section of the genus. Cousinia calocephala is the only endemic species of the section distributed in 14 provinces of Iran from Alborz to Zagros mountains. In present study 65 plant specimens of 13 geographical populations of C. calocephala were investigated based on the morphological and genetic (ISSR) data. ANOVA test revealed a significant morphological difference among the studied populations. Similarly, AMOVA test yielded a significant genetic difference between the studied populations, suggesting that the studied populations are morphologically and genetically differentiated. AMOVA test revealed that 94% of the total genetic difference was due to inter-populations genetic differences, while 6% was due to within-species genetic variability. The discriminating power of ISSR loci as determined by Gst against Nm analysis, revealed that almost all ISSR loci have an excellent discriminating power. Thus, ISSR markers are efficient in differentiating of the studied C. calocephala populations. The mantel test, revealed a significant positive correlation between genetic and morphological distance and geographical distance of the studied populations. Genetic analysis results revealed that along with genetic drift, low level of gene flow and migration, adaptive loci also helped populations diverge and adapt these populations to their local condition. Thus, we have three different groups which can be considered as three ecotypes for C. calocephala based on the morphological and genetic data.


Genetika ◽  
2021 ◽  
Vol 53 (2) ◽  
pp. 799-812
Author(s):  
Weimiao Chen ◽  
Majid Khayatnezhad ◽  
Nima Sarhadi

Allochrusa Bunge is a genus of subfamily Caryophylloideae Rabeler & Bittrich contains about 8 species distributed in Turkey, Central Asia, Afghanistan, Caucasus, Transcaucasus and Iran. Three species of Allochrusa versicolor, A. bungei and A. persica occur in Iran show some degree of morphological overlaps that make the species delimitation difficult. Till present time, there has been no detailed information available on morphological and genetic structure of these species in the country. The aims of the present study are: 1) to find the diagnostic value of SCoT markers in delimitation of Allochrusa species, 2) to find the genetic structure of these taxa in Iran, and 3) to investigate the species inter-relationship. For this study, 97 randomly collected plants from 7 geographical populations in three Allochrusa species were used. We encountered extensive within species genetic and morphological diversity. SCoT molecular markers could delimit the studied species. AMOVA and STRUCTURE analysis revealed that the species of Allochrusa are genetically differentiated. The Mantel test showed correlation between genetic distance and geographical distance of the populations studied. Genetic affinity of the studied species has been discussed.


Phytotaxa ◽  
2015 ◽  
Vol 233 (2) ◽  
pp. 166 ◽  
Author(s):  
Samaneh Mosaferi ◽  
Masoud Sheidai ◽  
Maryam Keshavarzi ◽  
Zahra Noormohammdai

A molecular investigation was carried out on the variable species Polygonum aviculare using 109 plants from 12 Iranian populations. ISSR molecular markers were used for genetic study. AMOVA and Gst analyses revealed a high genetic variability both within and among populations. Mantel test showed positive significant correlation between genetic and geographical distance of populations. Structure and K-Means clustering revealed stratification ingenetic characteristics of accessions. Networking and reticulation analyses showed some degree of gene exchange among populations. Consensus tree based on morphological and genetic data separated some of these populations from the others suggesting the existence of new taxa within this species.


Genetika ◽  
2015 ◽  
Vol 47 (2) ◽  
pp. 451-468 ◽  
Author(s):  
Malahat Taban ◽  
Masoud Sheidai ◽  
Zahra Noormohammadi ◽  
Narjes Azizi ◽  
Somayeh Ghasemzadeh-Baraki ◽  
...  

Helichrysum armenium and H. rubicundum are two medicinally important plants of Iran that are distributed in various regions of the country. They are extensively used by locals as medicinal plants and a great negative selection pressure is applied on them. Therefore, due to importance of these plant species, we performed a population genetic study in both species. For this study, we used 66 randomly collected plants from 24 geographical populations of Helichrysum armenium and H. rubicundu. These species had areas of overlap and contact and we found some intermediate plants that were included in our study too. UPGMA and MDS analyses revealed morphological separation of these closely related species and placed intermediate plants in an intermediate position. ISSR analysis revealed inter-population genetic diversity and K-Means clustering and STRUCTURE analyses revealed populations. Genetic stratification in both species. Genetic difference of the studied populations was not correlated to geographical distance. Triangle plot of Bayesian analysis and NeighborNet plot showed inter-specific gene flow. The studied populations showed plants with 2n = 2x = 14 and 2n = 4x = 28 chromosomes and differed significantly in their meiotic behavior. Therefore, a combination of genetic stratification, and genetic admixture as well as polyploidy and chromosomes structural changes, have played rule in Helichrysum diversification.


Author(s):  
Sergei Volis ◽  
Salit Kark

The study of biodiversity has received wide attention in recent decades. Biodiversity has been defined in various ways (Gaston and Spicer, 1998, Purvis and Hector 2000, and chapters in this volume). Discussion regarding its definitions is dynamic, with shifts between the more traditional emphasis on community structure to emphasis on the higher ecosystem level or the lower population levels (e.g., chapters in this volume, Poiani et al. 2000). One of the definitions, proposed in the United Nations Convention on Biological Diversity held in Rio de Janeiro (1992) is “the diversity within species, between species and of ecosystems.” The within-species component of diversity is further defined as “the frequency and diversity of different genes and/or genomes . . .” (IUCN 1993) as estimated by the genetic and morphological diversity within species. While research and conservation efforts in the past century have focused mainly on the community level, they have recently been extended to include the within-species (Hanski 1989) and the ecosystem levels. The component comprising within-species genetic and morphological diversity is increasingly emphasized as an important element of biodiversity (UN Convention 1992). Recent studies suggest that patterns of genetic diversity significantly influence the viability and persistence of local populations (Frankham 1996, Lacy 1997, Riddle 1996, Vrijenhoek et al. 1985). Revealing geographical patterns of genetic diversity is highly relevant to conservation biology and especially to explicit decision-making procedures allowing systematic rather than opportunistic selection of populations and areas for in situ protection (Pressey et al. 1993). Therefore, studying spatial patterns in within-species diversity may be vital in defining and prioritizing conservation efforts (Brooks et al. 1992). Local populations of a species often differ in the ecological conditions experienced by their members (Brown 1984, Gaston 1990, Lawton et al. 1994). These factors potentially affect population characteristics, structure, and within-population genetic and morphological diversity (Brussard 1984, Lawton 1995, Parsons 1991). The spatial location of a population within a species range may be related to its patterns of diversity (Lesica and Allendorf 1995). Thus, detecting within-species diversity patterns across distributional ranges is important for our understanding of ecological and evolutionary (e.g., speciation) processes (Smith et al. 1997), and for the determination of conservation priorities (Kark 1999).


2021 ◽  
Vol 63 (4) ◽  
pp. 308-316
Author(s):  
Sergiy Boiko

Abstract Changes that occur on the local level can explain the processes on the population level and, at the same time, are the driving force of species adaptation. This manuscript reports data about genetic diversities of the fungus Schizophyllum commune on the level of a local population. Objects of the study were dicarious cultures of S. commune collected from 38 basidiocarps grown on the territory of Holosiivskyi National Nature Park, Lysa Hora Regional Landscape Park and Feofaniya forest parcel (Ukraine). Results showed similarity of genetic variability of S. commune in different local populations. The heterozygote deficiency of some loci that was discovered might have resulted from new forms of allozymes that have not become widespread or due to small population sizes. The degree of differentiation of genes between local studied populations was moderate due to the high flow of genes. The absence of spatial structuration of genotypes is established, and the Mantel test showed a lack of interconnection between the genetic component and the geographical coordinates of the samples. It has been suggested that wind direction and terrain are the factors that influence the genetic structure of local populations.


HortScience ◽  
2010 ◽  
Vol 45 (4) ◽  
pp. 538-540 ◽  
Author(s):  
Min Deng ◽  
Jianjun Chen ◽  
Richard J. Henny ◽  
Qiansheng Li

Codiaeum variegatum (L.) Blume is one of the most popular ornamental foliage plants. It encompasses more than 300 recognized cultivars valued by their wide range of leaf shapes and vivid foliage colors. Thus far, only limited information is available regarding the genetic basis of their leaf morphological variation. This study investigated the chromosome numbers and karyotypes of seven phenotypically diverse cultivars. Root-tip cells were fixed, mounted, and observed under light microscopy. Results showed that chromosome numbers in the mitotic metaphase of the seven cultivars were high and variable and ranged from 2n = 66, 70, 72, 76, 80, 82, 84, to 2n = 96, indicating that the cultivars are polyploid and some could be aneuploid. Genetic mosaics occurred in one of the seven cultivars. Additionally, each cultivar had its own karyotype. There were no relationships between chromosome numbers or karyotypes and leaf morphology. Results from this study suggest that the morphological diversity among cultivars of this species could be in part attributed to high variation in chromosome numbers and karyotypes.


2000 ◽  
Vol 23 (3) ◽  
pp. 639-648 ◽  
Author(s):  
Cecilia Bessega ◽  
Beatriz O. Saidman ◽  
Juan C. Vilardi

Allozyme and random amplified polymorphic DNA (RAPD) techniques have been compared for their usefulness for genetic and taxonomic studies in Prosopis glandulosa and P. velutina populations. Isozymes and RAPDs yielded similarly high estimates of genetic variability. Genetic structure and differentiation were analyzed through non-hierarchical Wright's F DT. For all populations considered, both markers produced low gene flow (Nm < 1) estimates. When only P. glandulosa populations were analyzed, isozyme data yielded higher gene flow estimates (Nm > 1), in agreement with that expected for conspecific populations. However, in RAPD data the expected reduction in F DT and the increase in Nm were not observed. Correlation between F DT and geographical distance matrices (Mantel test) for all populations was significant (P = 0.02) when based on isozymes, but not so (P = 0.33) when based on RAPDs. No significant associations among genetic and geographical or climatic variables were observed. Two isoenzyme systems (GOT and PRX) enabled us to distinguish between P. glandulosa and P. velutina, but no diagnostic band for recognition of populations or species studied here were detected by RAPD. However, RAPD markers showed higher values for genetic differentiation among conspecific populations of P. glandulosa and a lower coefficient of variation than those obtained from isozymes.


Zootaxa ◽  
2008 ◽  
Vol 1945 (1) ◽  
pp. 39-50 ◽  
Author(s):  
ALBERT MONTORI ◽  
GUSTAVO A. LLORENTE ◽  
MARIO GARCÍA-PARÍS

The Pyrenean newt (Calotriton asper) is a morphologically diversified species endemic to the Pyrenean mountains (Western Europe) that inhabits fast running streams and mountain lakes. Given its high morphological diversity, the species has been subdivided into at least ten different taxa, subsequently treated by most authors as local forms. Herein, we examined the electrophoretic patterns produced by 20 presumptive allozyme loci in specimens of seven populations distributed over the entire geographic range of the species. Sixteen loci were monomorphic across the sampling area and only four loci were polymorphic. No diagnostic alleles of any population or population set were detected. The average number of alleles per locus was found to be extremely low, between 1.1 and 1.2 ± 0.1. Genetic divergence among populations was minimal, with a maximum divergence of Nei 78 = 0.031. No correlation was shown between genetic and geographic distances (Mantel test: r = -0.29, t = -1.1, p = 0.13). Fst values were low, as would be expected for a nonfragmented population. Estimated gene flow among populations was high, with a Nm = 1.01. Cytochrome b mtDNA sequences from the two populations furthest apart only differed in a single position. According to these genetic/morphological discrepancies, we interpret the observed morphological diversification of C. asper as a product of rapid morphological change under local selection pressure, in response to population specific ecological conditions. The implication of our findings for conservation efforts is that we need to preserve the unique evolutionary processes occurring in single populations or small groups of populations, even if the populations involved cannot be taxonomically differentiated.


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