KARAKTERISASI Bacillus spp. DAN Fusarium sp. DARI TANAMAN LADA (Piper nigrum L.) DI DESA JAGA

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Florianus Flori ◽  
Mukarlina Mukarlina ◽  
Rahmawati Rahmawati

Pepper (Piper nigrum L.) is one of the farm crop which become commodities in West Kalimantan. This research aimed to determine the morphological characteristic of Bacillus bacteria from rhizosphere of pepper and Fusarium fungi with symptoms of yellow disease. Sampling was done in pepper farm crops, Sungai Jaga Village, Bengkayang Regency. Isolation and identification were implemented at Microbiology Laboratory, Department of Biology, Faculty of Mathematics and Natural Science, Tanjungpura University, Pontianak. The result of isolation and identification showed 4 bacterial isolates belong to genus Bacillus, namely Bacillus sp. BRF1, Bacillus sp. BRF2, Bacillus sp. BRF3 and Bacillus sp. BRF4 and one isolate of Fusarium sp. JDF from pepper with symptom of yellow desease.

2019 ◽  
Vol 12 (3) ◽  
pp. 1061-1068 ◽  
Author(s):  
Vijitra Luang-In ◽  
Manatchanok Yotchaisarn ◽  
Worachot Saengha ◽  
Piyachat Udomwong ◽  
Sirirat Deeseenthum ◽  
...  

This study aimed to isolate and identify bacteria that can produce amylase enzyme from the unexplored Nasinuan Forest, Kantarawichai District, Mahasarakham Province, Thailand. Thirteen bacterial isolates with amylase-producing capacity on 1% starch agar were identified using 16S rRNA sequencing. Twelve bacteria were gram-positive, rod shaped and identified as Bacillus spp. and one bacterium with gram-negative and rod shaped character was Enterobacter cloacae. Their closest relatives were found in India, China, Korea, Indonesia, Argentina, Italy, Israel, USA, Argentina and South Africa. These bacteria were tested for specific amylase activity after 1-3 days enzyme induction with 1% starch at 37°C. The results showed the highest specific activity at day 2 incubation in the order: Bacillus cereus 3.5AL2 > 3.4AL1 > 1.4AL3 and thus 2-day enzyme induction was chosen for further analysis. Bacillus sp. 3.5AL2 was found to exhibit the highest specific amylase enzyme activity of 1.97 ± 0.41 U/mg protein at the optimal conditions of 60°C and pH 7.0 after 30 min incubation with 1% starch in 0.05 M PBS buffer. This amylase–producing bacterial strain offers great potential for applications in food and agricultural industries in Thailand.


2016 ◽  
Vol 68 (4) ◽  
pp. 845-852 ◽  
Author(s):  
Olja Stanojevic ◽  
Svetlana Milijasevic-Marcic ◽  
Ivana Potocnik ◽  
Milos Stepanovic ◽  
Ivica Dimkic ◽  
...  

The isolation of bacteria was carried out from samples of straw and chicken manure, compost at various stages of the composting process and casing soil used for growing button mushrooms. A preliminary screening of 108 bacterial isolates for antagonistic activity against Trichoderma aggressivum f. europaeum showed that 23 tested isolates inhibited mycelial growth of the pathogenic fungus. Further screening with four indicator isolates of fungi revealed that all 23 bacterial isolates inhibited the growth of T. aggressivum f. europaeum, T. harzianum and T. koningii, while only 13 isolates inhibited the growth of T. atroviride. T. aggressivum f. europaeum proved to be the most sensitive, with many bacterial isolates generating a high percentage of growth inhibition. Only two bacterial isolates (B-129 and B-268) were successful in inhibiting the growth of all 4 tested pathogens. All 23 bacterial isolates were characterized as Gram-positive and catalase-positive and were subjected to molecular identification based on the partial sequence, the hypervariant region of the 16S rDNA. It was shown that the obtained bacterial strains belong to Bacillus subtilis, B. amyloliquefaciens, B. licheniformis and B. pumilus species.


Author(s):  
Omorodion Nnenna ◽  
Alabo Briggs

Tomato (Solanum lycopersicum) and pepper (Capsicum annuum) are among the world’s most important vegetable crops. A total of 20 samples made up of fresh tomatoes, spoilt tomatoes, fresh pepper and spoilt pepper were analysed in this study. Standard microbiological practices were carried out on the samples. Total Heterotrophic Bacterial (THB) Count for Spoilt tomatoes ranged from 1.98x107cfu/g to 2.39x107cfu/g. Fresh tomatoes samples had a THB counts ranging from 1.43x106cfu/g to 2.14x106cfu/g. Spoilt pepper total heterotrophic bacteria counts ranged from 1.46x107cfu/g to 2.01x107cfu/g. Fresh pepper had a THB count of 1.22x106cfu/g to 1.66x106cfu/g. Spoilt tomatoes samples had a higher fungal count that ranged from 3.5x105cfu/g to 5.25x105cfu/g while the fresh tomatoes samples had lower fungal counts ranging from 1.95x104cfu/g to 3.45x104cfu/g. The spoilt pepper had fungal counts ranging from 1.45x105cfu/g to 2.65x105cfu/g which was higher than that of fresh pepper with a low count of 1.6x104cfu/g to 2.75x104.cfu/g. The bacterial isolates identified during this study are Staphylococcus sp., Escherichia coli, Bacillus sp., klebsiella sp., Pseudomonas sp., Shigella sp., Protues sp., Enterobacter sp., Citrobacter sp., Lactobacillus sp. Micrococcus sp. Listeria sp. Streptococcus sp. and Serratia sp. Spoilt tomatoes had the highest coliform count 1.02x105cfu/g to 9.0x105cfu/g while fresh tomatoes had a lower count of 4.65x105cfu/g to 6.75x105cfu/g. Spoilt pepper recorded coliform counts ranging from 3.8x105cfu/g to 9.4x105cfu/g. Most of the fungi isolated from both the tomatoes and pepper samples were molds and yeast which include Aspergillus niger, Aspergillus flavus, Candida sp., Saccharomyces sp., Penicillium sp. Mucor sp. and Fusarium sp. Adequate cooking is recommended before consumption.


2018 ◽  
Vol 1 (2) ◽  
pp. 193-203 ◽  
Author(s):  
Isna Rahma Dini ◽  
Wawan Wawan ◽  
Hapsoh Hapsoh ◽  
Sriwahyuni Sriwahyuni

One of the organisms that helps in decomposition of oil palm empty fruit bunches is Oryctes rhinoceros L. larvae. This is because of in the gut of the larvae there are many cellulolytic bacteria and lignoliytic. The process of accelerating the decomposition of oil palm empty fruit bunches into compost can be done by optimizing the work of the bacteria. The aim of this research is to obtain cellulolytic and lignolytic bacteria from larvae O. rhinoceros L.. The research succeeded to isolate 24 isolates of cellulolytic bacteria and lignolytic bacterial isolates from the gut of O. rhinoceros larvae. Based on qualitative test, 9 isolate bacteria produced cellulolytic index above 2. The highest cellulolytic index was generated by ORL19 isolate, while the lignolytic index obtained ORL6 isolate. Based on macroscopic and microscopic identification of bacteria, biochemical and physiological tests,  it was found ORL 6 belongs to the genus Bacillus sp. while the ORL 19 belongs to the genus Citrobacter sp..


Author(s):  
J Aquarista Ingratubun ◽  
Frans G Ijong ◽  
Hens Onibala

Food fermentation is one of various food processing techniques that has sufficient benefits of nutrition values, and also contains lactic acid bacteria which potentially inhibit pathogenic bacteria, thus prolong shelf life of  products. Bakasang is a traditional fermented food from North Sulawesi since many years ago. Reported research of bakasang previously had described that lactic acid bacteria was the dominant isolates and therefore current research  aimed to isolate and identify the lactic acid bacteria which associated during fermentation day 1 and day 15, respectively. Raw materials used were 5 kg intestine and liver of skipjack brought from local market Bersehati Manado. The intestine and liver of skipjack were washed and smashed and mixed with 10% salt  and 5% rice  from weight of the samples and then filled into bottle to be fermented for 15 days. Every 3 days (1,3,6,9,12,15), the samples were collected and analyzed for total lactic acid bacteria by using Total Plate Count Method on de Mann Rogosa Sharpe Agar after incubation at 37°C for 24 h. The colonies  grown were transferred to Tryptic Soy Broth and followed by streaking them on Tryptic Soy Agar and the free growing colony on agar medium were isolated into slant agar which were used for biochemical test such as Gram’s staining, motility test, catalase test, oksidase test, H2S test, IMVIC test (Indole, Methyl Red, Voges Proskauer, Citrate) and carbohydrate fermentation. The results showed that Lactobacillus sp., Bacillus sp., Eubacterium sp., and Bifidobacterium sp. All these four bacteria were distributed from day 1 to day 15 of the fermentation process© Fermentasi bahan pangan merupakan salah satu dari sekian banyak teknik pengolahan makanan yang mempunyai banyak manfaat dari kualitas gizi, mengandung bakteri asam laktat sehingga menghambat bakteri patogen sehingga daya simpan lebih panjang. Bakasang merupakan makanan fermentasi tradisional masyarakat Sulawesi Utara yang sudah ada sejak lama. Penelitian yang telah dilakukan terhadap bakasang menghasilkan informasi bahwa terdapat bakteri asam laktat pada bakasang sehingga menjadi tujuan untuk mengisolasi dan identifikasi bakteri asam laktat selama proses fermentasi 1-15 hari. Bahan baku bakasang ialah jeroan (usus dan hati) ikan cakalang Katsuwonis pelamis sebanyak 5 kg yang diambil dari pasar Bersehati Manado. Sampel jeroan dibersihkan kemudian dihancurkan, ditambahkan garam 10% dan nasi 5% kemudian difermentasi selama 15 hari dengan mengambil tiap-tiap sampel setiap 1, 3, 6, 9, 12, dan 15 untuk dihitung jumlah bakteri asam laktat dengan menggunakkan metode Total Plate Count pada media de Mann Rogosa Sharpe Agar dan koloni yang tumbuh di tumbuhkan  kembali pada media Tryptic Soy Broth  dan digores kembali pada media Tryptic Soy Agar, koloni yang tumbuh digores pada media slant agar yang selanjutnya diidentifikasi bakteri asam laktat berdasarkan uji biokimia yaitu uji pewarnaan Gram, uji motility, uji katalase, uji oksidase, uji H2S dan uji IMVIC (Indole, MethylRed, Voges Proskauer, Citrate). Hasil menunjukkan bahwa selama proses fermentasi berlangsung terdapat 4 genera bakteri asam laktat sesuai yaitu Lactobacillus sp., Bacillus sp., Eubacterium sp., dan Bifidobacterium sp., ke 4 genera ini tersebar pada fermentasi hari 1 sampai hari ke 15©


2013 ◽  
Vol 19 (4) ◽  
pp. 647-653
Author(s):  
Weiwei ZHAO ◽  
Xiuhua WANG ◽  
Zhen SUN ◽  
Jie HUANG ◽  
Yansong ZHU ◽  
...  

Author(s):  
Sharon Pelo ◽  
Vuyo Mavumengwana ◽  
Ezekiel Green

Plant endophytes are microbial sources of bioactive secondary metabolites, which mimic the natural compounds chemistry of their respective host plants in a similar manner. This study explored the isolation and identification of fungal endophytes, and investigated the antibacterial and antimycobacterial activity of their crude extracts. Fungal endophytes were isolated from Solanum mauritianum, identified using morphological traits and internal transcribed spacer ribosomal-deoxyribonucleic acid (ITS-rDNA) sequence analysis. Eight fungal endophytes were identified as Aureobasidium pullulans, Paracamarosporium leucadendri, Cladosporium sp., Collectotrichum boninense, Fusarium sp., Hyalodendriella sp., and Talaromyces sp., while Penicillium chrysogenum was isolated from the leaves and unripe fruits. Good activity was observed for the crude extracts of Paracamarosporium leucadendri inhibiting Mycobacterium bovis, Klebsiella pneumoniae, and Pseudomonas aeruginosa at 6 µg/mL. Crude extracts of Fusarium sp., showed activity at 9 μg/mL against M. bovis, M. smegmatis and K. pneumonia. In general, the crude extracts showed great activity against Gram-negative and Gram-positive bacteria and novel results for two mycobacteria species M. bovis and M. smegmatis. The results provide evidence of diverse fungal endophytes isolated from Solanum mauritianum, and evidence that fungal endophytes are a good source of bioactive compounds with pharmaceutical potential, particularly against Mycobacterium tuberculosis.


Nematology ◽  
2004 ◽  
Vol 6 (3) ◽  
pp. 375-387 ◽  
Author(s):  
N. Aileen Ryan ◽  
Peter Jones

AbstractSeventy bacteria, isolated from the rhizosphere of the potato cyst nematode (PCN) host plant, potato, were cultured in the presence and absence of potato root leachate (PRL) and the resultant culture filtrates were analysed for their ability to affect the hatch in vitro of the two PCN species. Of the isolates tested, nine had a significant effect on PCN hatch. Six affected Globodera pallida hatch and three affected G. rostochiensis hatch. Five of the isolates significantly increased hatch only when cultured in the presence of PRL. Three of the isolates decreased PCN hatch significantly in PRL. Only one isolate increased hatch significantly in the absence of PRL. No isolate affected the hatch of both species. Six of the nine isolates that significantly affected PCN hatch had been pre-selected by culturing on PRL. Bacterial isolates from PCN non-hosts (14 from wheat, 17 from sugar beet) were also tested for hatching activity. The principal effect of the hatch-active isolates from the PCN non-host plants was to increase PCN hatch in the presence of PRL. In contrast to the host bacteria results, the isolates from non-host plants affected only G. rostochiensis hatch (three wheat isolates and four sugar beet isolates significantly increased G. rostochiensis hatch); no such isolate affected G. pallida hatch significantly in the presence of PRL. Ten isolates (32%) from non-host plants had the ability to increase significantly the hatch of PCN in the absence of PRL (eight of these affected G. rostochiensis hatch and four affected G. pallida hatch), compared to only one bacterial isolate (1%) from a host plant. The majority of the isolates from non-hosts produced PCN species-specific effects, as with the bacteria isolated from potatoes, although two wheat isolates increased the hatch of both species significantly in the absence of PRL. Of 20 hatch-active bacterial isolates (from all three plants) identified, 70% were Bacillus spp. Other genera identified were Arthrobacter , Acinetobacter and Staphylococcus .


2021 ◽  
Vol 83 (4) ◽  
pp. 54-62
Author(s):  
Yu.V. Korzh ◽  
◽  
I.V. Dragovoz ◽  
L.V. Avdeeva ◽  
◽  
...  

Bacteria of the genus Bacillus make up a significant (8–12%) part of the soil microbiome. Manifestation of their biological activity, in particular, the antagonistic and lytic activity against other microorganisms directly depends on their exometabolites. According to the literature, such properties of soil bacteria of the genus Bacillus thus can be related to their various lytic exoenzymes. Aim. To evaluate the role of lytic exoenzymes of the studied soil bacteria strains of the genus Bacillus in the manifestation of their biological (antagonistic, lysing) activity. Methods. The antagonistic activity of bacteria strains of the genus Bacillus against phytopathogenic micromycetes was determined by the method of double culture in Petri dishes on potato-glucose agar. For qualitative analysis of the presence of extracellular enzymes, strains of bacteria of the genus Bacillus were plated on Petri dishes with solid mineral-salt medium and a suitable substrate inducer. The ratio of the diameter of substrate hydrolysis zone to the diameter of the colony was taken as the relative enzymatic activity of the culture. Bacteriolytic activity of the studied strains was determined by the change in optical density of living cells of phytopathogenic bacteria suspension at 540 nm. Results. Six strains of bacteria of the genus Bacillus were selected by the results of preliminary screening, with at least five types of lytic activity, namely proteolytic, chitinase, amylolytic, cellulase, and xylanase of different levels (low, average, high). Analysis of the antagonistic activity of the selected strains of bacteria of the genus Bacillus to the main groups of phytopathogenic bacteria (six test cultures) singled out the strain Bacillus sp. 41 for a careful study of the nature and spectrum of its antagonism. Analysis of the level of antagonistic activity of the selected Bacillus strains against the phytopathogenic micromycetes showed that the minimum decrease of antagonism (the decrease of growth inhibition zones) during the observation period (at the 3rd and 7th days) was in Bacillus sp. 41 strain. Therefore, only this strain showed a stable and relatively wide range of antagonistic activity against phytopathogens of bacterial and fungal etiology. The nature of this antagonism is probably complex and conditioned by the participation of various biochemical mechanisms, in particular, the synthesis of a complex of lytic exoenzymes. To assess the lysing activity of Bacillus strains, three strains with the highest proteolytic and cellulolytic activity of exoenzymes were taken from the six previously chosen. Only Bacillus sp.1913 strain showed high (70%) lytic activity against gram-negative polyphagous phytopathogen Pseudomonas syringae pv. syringae UCM B-1027T. Such activity of the strain did not manifest against the rest of the phytopathogenic test cultures. The high lytic activity of Bacillus sp. 1913 strain may be associated with high activity of exogenous proteases and cellulases of the lytic complex, which is quite consistent with the literature data on the lytic activity of bacteria of the genus Bacillus. Conclusions. The spectrum and activity of lytic exoenzymes of strains of the studied soil bacteria of the genus Bacillus indicate the indirect participation of these enzymes in the manifestation of biological activity (antagonistic and lytic).


Nova ◽  
2011 ◽  
Vol 9 (16) ◽  
pp. 177 ◽  
Author(s):  
Cristian Layton ◽  
Edna Maldonado ◽  
Luisa Monroy ◽  
Lucía Constanza Corrales Ramírez MSC ◽  
Ligia Consuelo Sánchez Leal MSC

El presente estudio documental evalúa el efecto biocontrolador del género <em>Bacillus sp </em>contra hongos fitopatógenos de plantas, particularmente, a través de relaciones antagónicas inductoras de muerte celular en términos inminentemente naturales. <em>Fusarium oxysporum </em>se encuentra muy relacionado con casos de marchitez vascular y pudrición de raíz en variedad de plantas, obstrucción de los vasos que permiten la circulación vegetal hasta causar amarillamiento de las hojas por imposibilidad en el transporte de nutrientes, causal de grandes pérdidas económicas en el campo agrícola nacional. Se han establecido varios mecanismos para controlar este hongo micelial dentro de las que se encuentran el uso extensivo y variable de agroquímicos y pesticidas, práctica que por sus efectos nocivos con el medio ambiente se ha comenzado a reemplazar por empleo de especies del género <em>Bacillus. </em>La acción biocontroladora de este género bacteriano esta mediada por su perfil bioquímico ya que son productores de múltiples metabolitos biológicamente activos, en el caso de <em>Bacillus subtilis </em>de Iturin A y fengycin y en <em>Bacillus brevis de gramicidina S </em>(1-5) son capaces de inhibir el desarrollo y crecimiento normal de otros microorganismos, lo que sugiere su utilización para el biocontrol de plagas en aras al fortalecimiento de los actuales estándares de calidad en los procesos ambientales.


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