BioSignal modelling for prediction of cardiac diseases using intra group selection method

2021 ◽  
Vol 15 (1) ◽  
pp. 151-160
Author(s):  
Hemant P. Kasturiwale ◽  
Sujata N. Kale

The Autonomous Nervous System (ANS) controls the nervous system and Heart Rate Variability (HRV) can be used as a diagnostic tool to diagnose heart defects. HRV can be classified into linear and nonlinear HRV indices which are used mostly to measure the efficiency of the model. For prediction of cardiac diseases, the selection and extraction features of machine learning model are effective. The available model used till date is based on HRV indices to predict the cardiac diseases accurately. The model could hardly throw light on specifics of indices, selection process and stability of the model. The proposed model is developed considering all facet electrocardiogram amplitude (ECG), frequency components, sampling frequency, extraction methods and acquisition techniques. The machine learning based model and its performance shall be tested using the standard BioSignal method, both on the data available and on the data obtained by the author. This is unique model developed by considering the vast number of mixtures sets and more than four complex cardiac classes. The statistical analysis is performed on a variety of databases such as MIT/BIH Normal Sinus Rhythm (NSR), MIT/BIH Arrhythmia (AR) and MIT/BIH Atrial Fibrillation (AF) and Peripheral Pule Analyser using feature compatibility techniques. The classifiers are trained for prediction with approximately 40000 sets of parameters. The proposed model reaches an average accuracy of 97.87 percent and is sensitive and précised. The best features are chosen from the different HRV features that will be used for classification. The present model was checked under all possible subject scenarios, such as the raw database and the non-ECG signal. In this sense, robustness is defined not only by the specificity parameter, but also by other measuring output parameters. Support Vector Machine (SVM), K-nearest Neighbour (KNN), Ensemble Adaboost (EAB) with Random Forest (RF) are tested in a 5% higher precision band and a lower band configuration. The Random Forest has produced better results, and its robustness has been established.

2020 ◽  
Vol 10 (24) ◽  
pp. 9151
Author(s):  
Yun-Chia Liang ◽  
Yona Maimury ◽  
Angela Hsiang-Ling Chen ◽  
Josue Rodolfo Cuevas Juarez

Air, an essential natural resource, has been compromised in terms of quality by economic activities. Considerable research has been devoted to predicting instances of poor air quality, but most studies are limited by insufficient longitudinal data, making it difficult to account for seasonal and other factors. Several prediction models have been developed using an 11-year dataset collected by Taiwan’s Environmental Protection Administration (EPA). Machine learning methods, including adaptive boosting (AdaBoost), artificial neural network (ANN), random forest, stacking ensemble, and support vector machine (SVM), produce promising results for air quality index (AQI) level predictions. A series of experiments, using datasets for three different regions to obtain the best prediction performance from the stacking ensemble, AdaBoost, and random forest, found the stacking ensemble delivers consistently superior performance for R2 and RMSE, while AdaBoost provides best results for MAE.


Animals ◽  
2020 ◽  
Vol 10 (5) ◽  
pp. 771
Author(s):  
Toshiya Arakawa

Mammalian behavior is typically monitored by observation. However, direct observation requires a substantial amount of effort and time, if the number of mammals to be observed is sufficiently large or if the observation is conducted for a prolonged period. In this study, machine learning methods as hidden Markov models (HMMs), random forests, support vector machines (SVMs), and neural networks, were applied to detect and estimate whether a goat is in estrus based on the goat’s behavior; thus, the adequacy of the method was verified. Goat’s tracking data was obtained using a video tracking system and used to estimate whether they, which are in “estrus” or “non-estrus”, were in either states: “approaching the male”, or “standing near the male”. Totally, the PC of random forest seems to be the highest. However, The percentage concordance (PC) value besides the goats whose data were used for training data sets is relatively low. It is suggested that random forest tend to over-fit to training data. Besides random forest, the PC of HMMs and SVMs is high. However, considering the calculation time and HMM’s advantage in that it is a time series model, HMM is better method. The PC of neural network is totally low, however, if the more goat’s data were acquired, neural network would be an adequate method for estimation.


2021 ◽  
Author(s):  
Jamal Ahmadov

Abstract The Tuscaloosa Marine Shale (TMS) formation is a clay- and liquid-rich emerging shale play across central Louisiana and southwest Mississippi with recoverable resources of 1.5 billion barrels of oil and 4.6 trillion cubic feet of gas. The formation poses numerous challenges due to its high average clay content (50 wt%) and rapidly changing mineralogy, making the selection of fracturing candidates a difficult task. While brittleness plays an important role in screening potential intervals for hydraulic fracturing, typical brittleness estimation methods require the use of geomechanical and mineralogical properties from costly laboratory tests. Machine Learning (ML) can be employed to generate synthetic brittleness logs and therefore, may serve as an inexpensive and fast alternative to the current techniques. In this paper, we propose the use of machine learning to predict the brittleness index of Tuscaloosa Marine Shale from conventional well logs. We trained ML models on a dataset containing conventional and brittleness index logs from 8 wells. The latter were estimated either from geomechanical logs or log-derived mineralogy. Moreover, to ensure mechanical data reliability, dynamic-to-static conversion ratios were applied to Young's modulus and Poisson's ratio. The predictor features included neutron porosity, density and compressional slowness logs to account for the petrophysical and mineralogical character of TMS. The brittleness index was predicted using algorithms such as Linear, Ridge and Lasso Regression, K-Nearest Neighbors, Support Vector Machine (SVM), Decision Tree, Random Forest, AdaBoost and Gradient Boosting. Models were shortlisted based on the Root Mean Square Error (RMSE) value and fine-tuned using the Grid Search method with a specific set of hyperparameters for each model. Overall, Gradient Boosting and Random Forest outperformed other algorithms and showed an average error reduction of 5 %, a normalized RMSE of 0.06 and a R-squared value of 0.89. The Gradient Boosting was chosen to evaluate the test set and successfully predicted the brittleness index with a normalized RMSE of 0.07 and R-squared value of 0.83. This paper presents the practical use of machine learning to evaluate brittleness in a cost and time effective manner and can further provide valuable insights into the optimization of completion in TMS. The proposed ML model can be used as a tool for initial screening of fracturing candidates and selection of fracturing intervals in other clay-rich and heterogeneous shale formations.


2018 ◽  
Vol 26 (1) ◽  
pp. 141-155 ◽  
Author(s):  
Li Luo ◽  
Fengyi Zhang ◽  
Yao Yao ◽  
RenRong Gong ◽  
Martina Fu ◽  
...  

Surgery cancellations waste scarce operative resources and hinder patients’ access to operative services. In this study, the Wilcoxon and chi-square tests were used for predictor selection, and three machine learning models – random forest, support vector machine, and XGBoost – were used for the identification of surgeries with high risks of cancellation. The optimal performances of the identification models were as follows: sensitivity − 0.615; specificity − 0.957; positive predictive value − 0.454; negative predictive value − 0.904; accuracy − 0.647; and area under the receiver operating characteristic curve − 0.682. Of the three models, the random forest model achieved the best performance. Thus, the effective identification of surgeries with high risks of cancellation is feasible with stable performance. Models and sampling methods significantly affect the performance of identification. This study is a new application of machine learning for the identification of surgeries with high risks of cancellation and facilitation of surgery resource management.


Sensors ◽  
2018 ◽  
Vol 18 (10) ◽  
pp. 3532 ◽  
Author(s):  
Nicola Mansbridge ◽  
Jurgen Mitsch ◽  
Nicola Bollard ◽  
Keith Ellis ◽  
Giuliana Miguel-Pacheco ◽  
...  

Grazing and ruminating are the most important behaviours for ruminants, as they spend most of their daily time budget performing these. Continuous surveillance of eating behaviour is an important means for monitoring ruminant health, productivity and welfare. However, surveillance performed by human operators is prone to human variance, time-consuming and costly, especially on animals kept at pasture or free-ranging. The use of sensors to automatically acquire data, and software to classify and identify behaviours, offers significant potential in addressing such issues. In this work, data collected from sheep by means of an accelerometer/gyroscope sensor attached to the ear and collar, sampled at 16 Hz, were used to develop classifiers for grazing and ruminating behaviour using various machine learning algorithms: random forest (RF), support vector machine (SVM), k nearest neighbour (kNN) and adaptive boosting (Adaboost). Multiple features extracted from the signals were ranked on their importance for classification. Several performance indicators were considered when comparing classifiers as a function of algorithm used, sensor localisation and number of used features. Random forest yielded the highest overall accuracies: 92% for collar and 91% for ear. Gyroscope-based features were shown to have the greatest relative importance for eating behaviours. The optimum number of feature characteristics to be incorporated into the model was 39, from both ear and collar data. The findings suggest that one can successfully classify eating behaviours in sheep with very high accuracy; this could be used to develop a device for automatic monitoring of feed intake in the sheep sector to monitor health and welfare.


2020 ◽  
Vol 2020 ◽  
pp. 1-10
Author(s):  
Faizan Ullah ◽  
Qaisar Javaid ◽  
Abdu Salam ◽  
Masood Ahmad ◽  
Nadeem Sarwar ◽  
...  

Ransomware (RW) is a distinctive variety of malware that encrypts the files or locks the user’s system by keeping and taking their files hostage, which leads to huge financial losses to users. In this article, we propose a new model that extracts the novel features from the RW dataset and performs classification of the RW and benign files. The proposed model can detect a large number of RW from various families at runtime and scan the network, registry activities, and file system throughout the execution. API-call series was reutilized to represent the behavior-based features of RW. The technique extracts fourteen-feature vector at runtime and analyzes it by applying online machine learning algorithms to predict the RW. To validate the effectiveness and scalability, we test 78550 recent malign and benign RW and compare with the random forest and AdaBoost, and the testing accuracy is extended at 99.56%.


Sensors ◽  
2021 ◽  
Vol 21 (21) ◽  
pp. 7417
Author(s):  
Alex J. Hope ◽  
Utkarsh Vashisth ◽  
Matthew J. Parker ◽  
Andreas B. Ralston ◽  
Joshua M. Roper ◽  
...  

Concussion injuries remain a significant public health challenge. A significant unmet clinical need remains for tools that allow related physiological impairments and longer-term health risks to be identified earlier, better quantified, and more easily monitored over time. We address this challenge by combining a head-mounted wearable inertial motion unit (IMU)-based physiological vibration acceleration (“phybrata”) sensor and several candidate machine learning (ML) models. The performance of this solution is assessed for both binary classification of concussion patients and multiclass predictions of specific concussion-related neurophysiological impairments. Results are compared with previously reported approaches to ML-based concussion diagnostics. Using phybrata data from a previously reported concussion study population, four different machine learning models (Support Vector Machine, Random Forest Classifier, Extreme Gradient Boost, and Convolutional Neural Network) are first investigated for binary classification of the test population as healthy vs. concussion (Use Case 1). Results are compared for two different data preprocessing pipelines, Time-Series Averaging (TSA) and Non-Time-Series Feature Extraction (NTS). Next, the three best-performing NTS models are compared in terms of their multiclass prediction performance for specific concussion-related impairments: vestibular, neurological, both (Use Case 2). For Use Case 1, the NTS model approach outperformed the TSA approach, with the two best algorithms achieving an F1 score of 0.94. For Use Case 2, the NTS Random Forest model achieved the best performance in the testing set, with an F1 score of 0.90, and identified a wider range of relevant phybrata signal features that contributed to impairment classification compared with manual feature inspection and statistical data analysis. The overall classification performance achieved in the present work exceeds previously reported approaches to ML-based concussion diagnostics using other data sources and ML models. This study also demonstrates the first combination of a wearable IMU-based sensor and ML model that enables both binary classification of concussion patients and multiclass predictions of specific concussion-related neurophysiological impairments.


2021 ◽  
Vol 2021 ◽  
pp. 1-14
Author(s):  
Hai-Bang Ly ◽  
Thuy-Anh Nguyen ◽  
Binh Thai Pham

Soil cohesion (C) is one of the critical soil properties and is closely related to basic soil properties such as particle size distribution, pore size, and shear strength. Hence, it is mainly determined by experimental methods. However, the experimental methods are often time-consuming and costly. Therefore, developing an alternative approach based on machine learning (ML) techniques to solve this problem is highly recommended. In this study, machine learning models, namely, support vector machine (SVM), Gaussian regression process (GPR), and random forest (RF), were built based on a data set of 145 soil samples collected from the Da Nang-Quang Ngai expressway project, Vietnam. The database also includes six input parameters, that is, clay content, moisture content, liquid limit, plastic limit, specific gravity, and void ratio. The performance of the model was assessed by three statistical criteria, namely, the correlation coefficient (R), mean absolute error (MAE), and root mean square error (RMSE). The results demonstrated that the proposed RF model could accurately predict soil cohesion with high accuracy (R = 0.891) and low error (RMSE = 3.323 and MAE = 2.511), and its predictive capability is better than SVM and GPR. Therefore, the RF model can be used as a cost-effective approach in predicting soil cohesion forces used in the design and inspection of constructions.


2020 ◽  
Vol 14 ◽  

Breast Cancer (BC) is amongst the most common and leading causes of deaths in women throughout the world. Recently, classification and data analysis tools are being widely used in the medical field for diagnosis, prognosis and decision making to help lower down the risks of people dying or suffering from diseases. Advanced machine learning methods have proven to give hope for patients as this has helped the doctors in early detection of diseases like Breast Cancer that can be fatal, in support with providing accurate outcomes. However, the results highly depend on the techniques used for feature selection and classification which will produce a strong machine learning model. In this paper, a performance comparison is conducted using four classifiers which are Multilayer Perceptron (MLP), Support Vector Machine (SVM), K-Nearest Neighbors (KNN) and Random Forest on the Wisconsin Breast Cancer dataset to spot the most effective predictors. The main goal is to apply best machine learning classification methods to predict the Breast Cancer as benign or malignant using terms such as accuracy, f-measure, precision and recall. Experimental results show that Random forest is proven to achieve the highest accuracy of 99.26% on this dataset and features, while SVM and KNN show 97.78% and 97.04% accuracy respectively. MLP shows the least accuracy of 94.07%. All the experiments are conducted using RStudio as the data mining tool platform.


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