scholarly journals Characterization of Inducible HSP70 Genes in an Antarctic Yeast, Glaciozyma antarctica PI12, in Response to Thermal Stress

2021 ◽  
Vol 9 (10) ◽  
pp. 2069
Author(s):  
Nur Athirah Yusof ◽  
Jennifer Charles ◽  
Wan Nur Shuhaida Wan Mahadi ◽  
Abdul Munir Abdul Murad ◽  
Nor Muhammad Mahadi
Keyword(s):  
Thermal Stress ◽  
Cellular Response ◽  
Atp Hydrolysis ◽  
Comparative Modeling ◽  
Physiological Adaptation ◽  
Ambient Temperatures ◽  
Wide Range ◽  
Antarctic Yeast ◽  
Glaciozyma Antarctica Pi12 ◽  
The Antarctic

The induction of highly conserved heat shock protein 70 (HSP70) is often related to a cellular response due to harmful stress or adverse life conditions. In this study, we determined the expression of Hsp70 genes in the Antarctic yeast, Glaciozyma antarctica, under different several thermal treatments for several exposure periods. The main aims of the present study were (1) to determine if stress-induced Hsp70 could be used to monitor the exposure of the yeast species G. antarctica to various types of thermal stress; (2) to analyze the structures of the G. antarctica HSP70 proteins using comparative modeling; and (3) to evaluate the relationship between the function and structure of HSP70 in G. antarctica. In this study, we managed to amplify and clone 2 Hsp70 genes from G. antarctica named GaHsp70-1 and GaHsp70-2. The cells of G. antarctica expressed significantly inducible Hsp70 genes after the heat and cold shock treatments. Interestingly, GaHsp70-1 showed 2–6-fold higher expression than GaHsp70-2 after the heat and cold exposure. ATP hydrolysis analysis on both G. antarctica HSP70s proved that these psychrophilic chaperones can perform activities in a wide range of temperatures, such as at 37, 25, 15, and 4 °C. The 3D structures of both HSP70s revealed several interesting findings, such as the substitution of a β-sheet to loop in the N-terminal ATPase binding domain and some modest residue substitutions, which gave the proteins the flexibility to function at low temperatures and retain their functional activity at ambient temperatures. In conclusion, both analyzed HSP70s played important roles in the physiological adaptation of G. antarctica.

Thermal stress responses in Antarctic yeast, Glaciozyma antarctica PI12, characterized by real-time quantitative PCR

Polar Biology ◽  
2012 ◽  
Vol 36 (3) ◽  
pp. 381-389 ◽  
Author(s):  
Sook Yee Boo ◽  
Clemente Michael Vui Ling Wong ◽  
Kenneth Francis Rodrigues ◽  
Nazalan Najimudin ◽  
Abdul Munir Abdul Murad ◽  
...  
Keyword(s):  
Thermal Stress ◽  
Real Time ◽  
Quantitative Pcr ◽  
Stress Responses ◽  
Real Time Quantitative Pcr ◽  
Antarctic Yeast ◽  
Glaciozyma Antarctica Pi12

Functional and structural analyses of an expansin-like protein from the antarctic yeast Glaciozyma antarctica PI12 reveal strategies of nutrient scavenging in the sea ice environment

2020 ◽  
Vol 144 ◽  
pp. 231-241
Author(s):  
Nooraisyah Mohamad Nor ◽  
Noor Haza Fazlin Hashim ◽  
Doris Huai Xia Quay ◽  
Nor Muhammad Mahadi ◽  
Rosli Md Illias ◽  
...  
Keyword(s):  
Sea Ice ◽  
Antarctic Yeast ◽  
Glaciozyma Antarctica Pi12 ◽  
The Antarctic

scholarly journals Not Just Transporters: Alternative Functions of ABC Transporters in Bacillus subtilis and Listeria monocytogenes

2021 ◽  
Vol 9 (1) ◽  
pp. 163
Author(s):  
Jeanine Rismondo ◽  
Lisa Maria Schulz
Keyword(s):  
Bacillus Subtilis ◽  
Listeria Monocytogenes ◽  
Abc Transporters ◽  
Organic Molecules ◽  
Atp Hydrolysis ◽  
The Past ◽  
Wide Range ◽  
Regulatory Functions ◽  
Complex Organic ◽  
Detoxification Mechanisms

ATP-binding cassette (ABC) transporters are usually involved in the translocation of their cognate substrates, which is driven by ATP hydrolysis. Typically, these transporters are required for the import or export of a wide range of substrates such as sugars, ions and complex organic molecules. ABC exporters can also be involved in the export of toxic compounds such as antibiotics. However, recent studies revealed alternative detoxification mechanisms of ABC transporters. For instance, the ABC transporter BceAB of Bacillus subtilis seems to confer resistance to bacitracin via target protection. In addition, several transporters with functions other than substrate export or import have been identified in the past. Here, we provide an overview of recent findings on ABC transporters of the Gram-positive organisms B. subtilis and Listeria monocytogenes with transport or regulatory functions affecting antibiotic resistance, cell wall biosynthesis, cell division and sporulation.

Fuel Droplet Evaporation in a Supercritical Environment

2002 ◽  
Vol 124 (4) ◽  
pp. 762-770 ◽  
Author(s):  
G. S. Zhu ◽  
S. K. Aggarwal
Keyword(s):  
Experimental Data ◽  
Phase Equilibrium ◽  
Ambient Pressure ◽  
Droplet Surface ◽  
Fuel Vapor ◽  
Phase Solubility ◽  
Liquid Density ◽  
Ambient Temperatures ◽  
Droplet Vaporization ◽  
Wide Range

This paper reports a numerical investigation of the transcritical droplet vaporization phenomena. The simulation is based on the time-dependent conservation equations for liquid and gas phases, pressure-dependent variable thermophysical properties, and a detailed treatment of liquid-vapor phase equilibrium at the droplet surface. The numerical solution of the two-phase equations employs an arbitrary Eulerian-Lagrangian, explicit-implicit method with a dynamically adaptive mesh. Three different equations of state (EOS), namely the Redlich-Kwong (RK), the Peng-Robinson (PR), and Soave-Redlich-Kwong (SRK) EOS, are employed to represent phase equilibrium at the droplet surface. In addition, two different methods are used to determine the liquid density. Results indicate that the predictions of RK-EOS are significantly different from those obtained by using the RK-EOS and SRK-EOS. For the phase-equilibrium of n-heptane-nitrogen system, the RK-EOS predicts higher liquid-phase solubility of nitrogen, higher fuel vapor concentration, lower critical-mixing-state temperature, and lower enthalpy of vaporization. As a consequence, it significantly overpredicts droplet vaporization rates, and underpredicts droplet lifetimes compared to those predicted by PR and SRK-EOS. In contrast, predictions using the PR-EOS and SRK-EOS show excellent agreement with each other and with experimental data over a wide range of conditions. A detailed investigation of the transcritical droplet vaporization phenomena indicates that at low to moderate ambient temperatures, the droplet lifetime first increases and then decreases as the ambient pressure is increased. At high ambient temperatures, however, the droplet lifetime decreases monotonically with pressure. This behavior is in accord with the reported experimental data.

scholarly journals Sesquiterpene emissions from vegetation: a review

2008 ◽  
Vol 5 (3) ◽  
pp. 761-777 ◽  
Author(s):  
T. R. Duhl ◽  
D. Helmig ◽  
A. Guenther
Keyword(s):  
Plant Species ◽  
Emission Rates ◽  
Sample Collection ◽  
Ambient Temperatures ◽  
Relative Contribution ◽  
Environmental Controls ◽  
Weather Events ◽  
Wide Range ◽  
Experimental Protocols ◽  
Selection Of Species

Abstract. This literature review summarizes the environmental controls governing biogenic sesquiterpene (SQT) emissions and presents a compendium of numerous SQT-emitting plant species as well as the quantities and ratios of SQT species they have been observed to emit. The results of many enclosure-based studies indicate that temporal SQT emission variations appear to be dominated mainly by ambient temperatures although other factors contribute (e.g., seasonal variations). This implies that SQT emissions have increased significance at certain times of the year, especially in late spring to mid-summer. The strong temperature dependency of SQT emissions also creates the distinct possibility of increasing SQT emissions in a warmer climate. Disturbances to vegetation (from herbivores and possibly violent weather events) are clearly also important in controlling short-term SQT emissions bursts, though the relative contribution of disturbance-induced emissions is not known. Based on the biogenic SQT emissions studies reviewed here, SQT emission rates among numerous species have been observed to cover a wide range of values, and exhibit substantial variability between individuals and across species, as well as at different environmental and phenological states. These emission rates span several orders of magnitude (10s–1000s of ng gDW-1 h−1). Many of the higher rates were reported by early SQT studies, which may have included artificially-elevated SQT emission rates due to higher-than-ambient enclosure temperatures and disturbances to enclosed vegetation prior to and during sample collection. When predicting landscape-level SQT fluxes, modelers must consider the numerous sources of variability driving observed SQT emissions. Characterizations of landscape and global SQT fluxes are highly uncertain given differences and uncertainties in experimental protocols and measurements, the high variability in observed emission rates from different species, the selection of species that have been studied so far, and ambiguities regarding controls over emissions. This underscores the need for standardized experimental protocols, better characterization of disturbance-induced emissions, screening of dominant plant species, and the collection of multiple replicates from several individuals within a given species or genus as well as a better understanding of seasonal dependencies of SQT emissions in order to improve the representation of SQT emission rates.

scholarly journals The AAA+ ATPase p97, a cellular multitool

2017 ◽  
Vol 474 (17) ◽  
pp. 2953-2976 ◽  
Author(s):  
Lasse Stach ◽  
Paul S. Freemont
Keyword(s):  
Atp Hydrolysis ◽  
Current Status ◽  
Cellular Functions ◽  
Aaa Atpase ◽  
Cellular Processes ◽  
Proteotoxic Stress ◽  
Binding Domains ◽  
Wide Range ◽  
Aaa Atpases ◽  
Substrate Proteins

The AAA+ (ATPases associated with diverse cellular activities) ATPase p97 is essential to a wide range of cellular functions, including endoplasmic reticulum-associated degradation, membrane fusion, NF-κB (nuclear factor kappa-light-chain-enhancer of activated B cells) activation and chromatin-associated processes, which are regulated by ubiquitination. p97 acts downstream from ubiquitin signaling events and utilizes the energy from ATP hydrolysis to extract its substrate proteins from cellular structures or multiprotein complexes. A multitude of p97 cofactors have evolved which are essential to p97 function. Ubiquitin-interacting domains and p97-binding domains combine to form bi-functional cofactors, whose complexes with p97 enable the enzyme to interact with a wide range of ubiquitinated substrates. A set of mutations in p97 have been shown to cause the multisystem proteinopathy inclusion body myopathy associated with Paget's disease of bone and frontotemporal dementia. In addition, p97 inhibition has been identified as a promising approach to provoke proteotoxic stress in tumors. In this review, we will describe the cellular processes governed by p97, how the cofactors interact with both p97 and its ubiquitinated substrates, p97 enzymology and the current status in developing p97 inhibitors for cancer therapy.

Energy intake and fur in summer- and winter-acclimated Siberian hamsters (Phodopus sungorus)

2001 ◽  
Vol 281 (2) ◽  
pp. R519-R527 ◽  
Author(s):  
Alexander S. Kauffman ◽  
Alessandra Cabrera ◽  
Irving Zucker
Keyword(s):  
Food Intake ◽  
Energy Intake ◽  
Ventral Surface ◽  
Phodopus Sungorus ◽  
Ambient Temperatures ◽  
Siberian Hamsters ◽  
Daily Food ◽  
Brown Adipose ◽  
Wide Range ◽  
The Impact

Few studies have directly addressed the impact of fur on seasonal changes in energy intake. The daily food intake of Siberian hamsters ( Phodopus sungorus) was measured under simulated summer and winter conditions in intact animals and those with varying amounts of pelage removed. Energy intake increased up to 44% above baseline control values for approximately 2–3 wk after complete shaving. Increases in food intake varied with condition and were greater in hamsters housed in short than long day lengths and at low (5°C) than moderate (23°C) ambient temperatures. Removal of 8 cm2 of dorsal fur, equivalent to 30% of the total dorsal fur surface, increased food intake, but removal of 4 cm2 had no effect. An 8-cm2 fur extirpation from the ventral surface did not increase food consumption. Food intake was not influenced differentially by fur removal from above brown adipose tissue hot spots. Fur plays a greater role in energy balance in winter- than summer-acclimated hamsters and conserves energy under a wide range of environmental conditions.

scholarly journals Expression pattern of heat shock proteins during acute thermal stress in the Antarctic sea urchin, Sterechinus neumayeri

2016 ◽  
Vol 89 (1) ◽  
Author(s):  
Karina González ◽  
Juan Gaitán-Espitia ◽  
Alejandro Font ◽  
César A. Cárdenas ◽  
Marcelo González-Aravena
Keyword(s):  
Thermal Stress ◽  
Heat Shock ◽  
Heat Shock Proteins ◽  
Expression Pattern ◽  
Sea Urchin ◽  
Sterechinus Neumayeri ◽  
Shock Proteins ◽  
The Antarctic

scholarly journals Warm temperatures, cool sponges: the effect of increased temperatures on the Antarctic sponge Isodictya sp.

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e8088 ◽  
Author(s):  
Marcelo González-Aravena ◽  
Nathan J. Kenny ◽  
Magdalena Osorio ◽  
Alejandro Font ◽  
Ana Riesgo ◽  
...  
Keyword(s):  
Thermal Stress ◽  
De Novo ◽  
Cold Water ◽  
Heat Exposure ◽  
Time Frame ◽  
Molecular Response ◽  
Short Term ◽  
Sres Scenarios ◽  
Ipcc Sres ◽  
The Antarctic

Although the cellular and molecular responses to exposure to relatively high temperatures (acute thermal stress or heat shock) have been studied previously, only sparse empirical evidence of how it affects cold-water species is available. As climate change becomes more pronounced in areas such as the Western Antarctic Peninsula, both long-term and occasional acute temperature rises will impact species found there, and it has become crucial to understand the capacity of these species to respond to such thermal stress. Here, we use the Antarctic sponge Isodictya sp. to investigate how sessile organisms (particularly Porifera) can adjust to acute short-term heat stress, by exposing this species to 3 and 5 °C for 4 h, corresponding to predicted temperatures under high-end 2080 IPCC-SRES scenarios. Assembling a de novo reference transcriptome (90,188 contigs, >93.7% metazoan BUSCO genes) we have begun to discern the molecular response employed by Isodictya to adjust to heat exposure. Our initial analyses suggest that TGF-β, ubiquitin and hedgehog cascades are involved, alongside other genes. However, the degree and type of response changed little from 3 to 5 °C in the time frame examined, suggesting that even moderate rises in temperature could cause stress at the limits of this organism’s capacity. Given the importance of sponges to Antarctic ecosystems, our findings are vital for discerning the consequences of short-term increases in Antarctic ocean temperature on these and other species.

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