scholarly journals Most Relevant Spectral Bands Identification for Brain Cancer Detection Using Hyperspectral Imaging

Sensors ◽  
2019 ◽  
Vol 19 (24) ◽  
pp. 5481 ◽  
Author(s):  
Beatriz Martinez ◽  
Raquel Leon ◽  
Himar Fabelo ◽  
Samuel Ortega ◽  
Juan F. Piñeiro ◽  
...  
Keyword(s):  
Hyperspectral Imaging ◽  
Brain Cancer ◽  
Near Infrared ◽  
Relevant Information ◽  
Support Vector ◽  
Algorithm Optimization ◽  
Spectral Bands ◽  
Tumor Identification ◽  
Spectral Ranges

Hyperspectral imaging (HSI) is a non-ionizing and non-contact imaging technique capable of obtaining more information than conventional RGB (red green blue) imaging. In the medical field, HSI has commonly been investigated due to its great potential for diagnostic and surgical guidance purposes. However, the large amount of information provided by HSI normally contains redundant or non-relevant information, and it is extremely important to identify the most relevant wavelengths for a certain application in order to improve the accuracy of the predictions and reduce the execution time of the classification algorithm. Additionally, some wavelengths can contain noise and removing such bands can improve the classification stage. The work presented in this paper aims to identify such relevant spectral ranges in the visual-and-near-infrared (VNIR) region for an accurate detection of brain cancer using in vivo hyperspectral images. A methodology based on optimization algorithms has been proposed for this task, identifying the relevant wavelengths to achieve the best accuracy in the classification results obtained by a supervised classifier (support vector machines), and employing the lowest possible number of spectral bands. The results demonstrate that the proposed methodology based on the genetic algorithm optimization slightly improves the accuracy of the tumor identification in ~5%, using only 48 bands, with respect to the reference results obtained with 128 bands, offering the possibility of developing customized acquisition sensors that could provide real-time HS imaging. The most relevant spectral ranges found comprise between 440.5–465.96 nm, 498.71–509.62 nm, 556.91–575.1 nm, 593.29–615.12 nm, 636.94–666.05 nm, 698.79–731.53 nm and 884.32–902.51 nm.

scholarly journals Forensic analysis of beverage stains using hyperspectral imaging

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Binu Melit Devassy ◽  
Sony George
Keyword(s):  
Hyperspectral Imaging ◽  
Crime Scene ◽  
Forensic Analysis ◽  
Classification Model ◽  
Support Vector ◽  
Additional Information ◽  
Non Invasive ◽  
Spectral Bands ◽  
Data Dimensionality Reduction ◽  
Gradient Based

AbstractDocumentation and analysis of crime scene evidences are of great importance in any forensic investigation. In this paper, we present the potential of hyperspectral imaging (HSI) to detect and analyze the beverage stains on a paper towel. To detect the presence and predict the age of the commonly used drinks in a crime scene, we leveraged the additional information present in the HSI data. We used 12 different beverages and four types of paper hand towel to create the sample stains in the current study. A support vector machine (SVM) is used to achieve the classification, and a convolutional auto-encoder is used to achieve HSI data dimensionality reduction, which helps in easy perception, process, and visualization of the data. The SVM classification model was re-established for a lighter and quicker classification model on the basis of the reduced dimension. We employed volume-gradient-based band selection for the identification of relevant spectral bands in the HSI data. Spectral data recorded at different time intervals up to 72 h is analyzed to trace the spectral changes. The results show the efficacy of the HSI techniques for rapid, non-contact, and non-invasive analysis of beverage stains.

scholarly journals Supervised Machine Learning Methods and Hyperspectral Imaging Techniques Jointly Applied for Brain Cancer Classification

Sensors ◽  
2021 ◽  
Vol 21 (11) ◽  
pp. 3827
Author(s):  
Gemma Urbanos ◽  
Alberto Martín ◽  
Guillermo Vázquez ◽  
Marta Villanueva ◽  
Manuel Villa ◽  
...  
Keyword(s):  
Machine Learning ◽  
Blood Vessel ◽  
Hyperspectral Imaging ◽  
Imaging Techniques ◽  
Venous Blood ◽  
Healthy Tissue ◽  
Supervised Machine Learning ◽  
Support Vector ◽  
Arterial Blood

Hyperspectral imaging techniques (HSI) do not require contact with patients and are non-ionizing as well as non-invasive. As a consequence, they have been extensively applied in the medical field. HSI is being combined with machine learning (ML) processes to obtain models to assist in diagnosis. In particular, the combination of these techniques has proven to be a reliable aid in the differentiation of healthy and tumor tissue during brain tumor surgery. ML algorithms such as support vector machine (SVM), random forest (RF) and convolutional neural networks (CNN) are used to make predictions and provide in-vivo visualizations that may assist neurosurgeons in being more precise, hence reducing damages to healthy tissue. In this work, thirteen in-vivo hyperspectral images from twelve different patients with high-grade gliomas (grade III and IV) have been selected to train SVM, RF and CNN classifiers. Five different classes have been defined during the experiments: healthy tissue, tumor, venous blood vessel, arterial blood vessel and dura mater. Overall accuracy (OACC) results vary from 60% to 95% depending on the training conditions. Finally, as far as the contribution of each band to the OACC is concerned, the results obtained in this work are 3.81 times greater than those reported in the literature.

scholarly journals Identification of peat type and humification by laboratory VNIR/SWIR hyperspectral imaging of peat profiles with focus on fen-bog transition in aapa mires

2020 ◽  
Author(s):  
L. Granlund ◽  
M. Keinänen ◽  
T. Tahvanainen
Keyword(s):  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Support Vector ◽  
High Resolution Imaging ◽  
Factors Affecting ◽  
Vector Machines ◽  
Resolution Imaging ◽  
Shortwave Infrared ◽  
Type Classification ◽  
Wide Potential

Abstract Aims Hyperspectral imaging (HSI) has high potential for analysing peat cores, but methodologies are deficient. We aimed for robust peat type classification and humification estimation. We also explored other factors affecting peat spectral properties. Methods We used two laboratory setups: VNIR (visible to near-infrared) and SWIR (shortwave infrared) for high resolution imaging of intact peat profiles with fen-bog transitions. Peat types were classified with support vector machines, indices were developed for von Post estimation, and K-means clustering was used to analyse stratigraphic patterns in peat quality. With separate experiments, we studied spectral effects of drying and oxidation. Results Despite major effects, oxidation and water content did not impede robust HSI classification. The accuracy between Carex peat and Sphagnum peat in validation was 80% with VNIR and 81% with SWIR data. The spectral humification indices had accuracies of 82% with VNIR and 56%. Stratigraphic HSI patterns revealed that 36% of peat layer shifts were inclined by over 20 degrees. Spectral indices were used to extrapolate visualisations of element concentrations. Conclusions HSI provided reliable information of basic peat quality and was useful in visual mapping, that can guide sampling for other analyses. HSI can manage large amounts of samples to widen the scope of detailed analysis beyond single profiles and it has wide potential in peat research beyond the exploratory scope of this paper. We were able to confirm the capacity of HSI to reveal shifts of peat quality, connected to ecosystem-scale change.

scholarly journals Image and Point Data Fusion for Enhanced Discrimination of Ore and Waste in Mining

Minerals ◽  
2020 ◽  
Vol 10 (12) ◽  
pp. 1110
Author(s):  
Feven Desta ◽  
Mike Buxton
Keyword(s):  
Near Infrared ◽  
Methodological Approach ◽  
Relevant Information ◽  
Waste Materials ◽  
Support Vector ◽  
Electromagnetic Spectrum ◽  
Sulphide Deposit ◽  
Data Volume ◽  
Point Data

Sensor technologies provide relevant information on the key geological attributes in mining. The integration of data from multiple sources is advantageous in making use of the synergy among the outputs for the enhanced characterisation of materials. Sensors produce various types of data. Thus, the fusion of these data requires innovative data-driven strategies. In the present study, the fusion of image and point data is proposed, aiming for the enhanced classification of ore and waste materials in a polymetallic sulphide deposit at 3%, 5% and 7% cut-off grades. The image data were acquired in the visible-near infrared (VNIR) and short-wave infrared (SWIR) regions of the electromagnetic spectrum. The point data cover the mid-wave infrared (MWIR) and long-wave infrared (LWIR) spectral regions. A multi-step methodological approach was developed for the fusion of the image and point data at multiple levels using the supervised and unsupervised classification techniques. Several possible combinations of the data blocks were evaluated to select the optimal combinations in an optimised way. The obtained results indicate that the individual image and point techniques resulted in a successful classification of ore and waste materials. However, the classification performance greatly improved with the fusion of image and point data, where the K-means and support vector classification (SVC) models provided acceptable results. The proposed approach enables a significant reduction in data volume while maintaining the relevant information in the spectra. This is principally beneficial for the integration of data from high-throughput and large data volume sources. Thus, the effectiveness and practicality of the approach can permit the enhanced separation of ore and waste materials in operational mines.

scholarly journals Rapid and Nondestructive Discrimination of Geographical Origins of Longjing Tea using Hyperspectral Imaging at Two Spectral Ranges Coupled with Machine Learning Methods

2020 ◽  
Vol 10 (3) ◽  
pp. 1173 ◽  
Author(s):  
Zhiqi Hong ◽  
Yong He
Keyword(s):  
Hyperspectral Imaging ◽  
Nutritional Value ◽  
Geographical Origin ◽  
Principal Component ◽  
Hyperspectral Images ◽  
Imaging Systems ◽  
Support Vector ◽  
Spectral Ranges ◽  
Tea Leaf ◽  
Non Destructive

Longjing tea is one of China’s protected geographical indication products with high commercial and nutritional value. The geographical origin of Longjing tea is an important factor influencing its commercial and nutritional value. Hyperspectral imaging systems covering the two spectral ranges of 380–1030 nm and 874–1734 nm were used to identify a single tea leaf of Longjing tea from six geographical origins. Principal component analysis (PCA) was conducted on hyperspectral images to form PCA score images. Differences among samples from different geographical origins were visually observed from the PCA score images. Support vector machine (SVM) and partial least squares discriminant analysis (PLS-DA) models were built using the full spectra at the two spectral ranges. Decent classification performances were obtained at the two spectral ranges, with the overall classification accuracy of the calibration and prediction sets over 84%. Furthermore, prediction maps for geographical origins identification of Longjing tea were obtained by applying the SVM models on the hyperspectral images. The overall results illustrate that hyperspectral imaging at both spectral ranges can be applied to identify the geographical origin of single tea leaves of Longjing tea. This study provides a new, rapid, and non-destructive alternative for Longjing tea geographical origins identification.

scholarly journals Nanocurcumin-Loaded UCNPs for Cancer Theranostics: Physicochemical Properties, In Vitro Toxicity, and In Vivo Imaging Studies

Nanomaterials ◽  
2021 ◽  
Vol 11 (9) ◽  
pp. 2234
Author(s):  
Anbharasi Lakshmanan ◽  
Roman A. Akasov ◽  
Natalya V. Sholina ◽  
Polina A. Demina ◽  
Alla N. Generalova ◽  
...  
Keyword(s):  
Near Infrared ◽  
Therapeutic Potential ◽  
Ex Vivo ◽  
Laboratory Animals ◽  
In Vitro Toxicity ◽  
Upconversion Nanoparticles ◽  
Lewis Lung Cancer ◽  
Spectral Bands

Formulation of promising anticancer herbal drug curcumin as a nanoscale-sized curcumin (nanocurcumin) improved its delivery to cells and organisms both in vitro and in vivo. We report on coupling nanocurcumin with upconversion nanoparticles (UCNPs) using Poly (lactic-co-glycolic Acid) (PLGA) to endow visualisation in the near-infrared transparency window. Nanocurcumin was prepared by solvent-antisolvent method. NaYF4:Yb,Er (UCNP1) and NaYF4:Yb,Tm (UCNP2) nanoparticles were synthesised by reverse microemulsion method and then functionalized it with PLGA to form UCNP-PLGA nanocarrier followed up by loading with the solvent-antisolvent process synthesized herbal nanocurcumin. The UCNP samples were extensively characterised with XRD, Raman, FTIR, DSC, TGA, UV-VIS-NIR spectrophotometer, Upconversion spectrofluorometer, HRSEM, EDAX and Zeta Potential analyses. UCNP1-PLGA-nanocurcumin exhibited emission at 520, 540, 660 nm and UCNP2-PLGA-nanocurmin showed emission at 480 and 800 nm spectral bands. UCNP-PLGA-nanocurcumin incubated with rat glioblastoma cells demonstrated moderate cytotoxicity, 60–80% cell viability at 0.12–0.02 mg/mL marginally suitable for therapeutic applications. The cytotoxicity of UCNPs evaluated in tumour spheroids models confirmed UCNP-PLGA-nanocurcumin therapeutic potential. As-synthesised curcumin-loaded nanocomplexes were administered in tumour-bearing laboratory animals (Lewis lung cancer model) and showed adequate contrast to enable in vivo and ex vivo study of UCNP-PLGA-nanocurcumin bio distribution in organs, with dominant distribution in the liver and lungs. Our studies demonstrate promise of nanocurcumin-loaded upconversion nanoparticles for theranostics applications.

scholarly journals CROP CLASSIFICATION ON SINGLE DATE SENTINEL-2 IMAGERY USING RANDOM FOREST AND SUPPOR VECTOR MACHINE

2018 ◽  
Vol XLII-5 ◽  
pp. 683-688 ◽  
Author(s):  
R. Saini ◽  
S. K. Ghosh
Keyword(s):  
Random Forest ◽  
Near Infrared ◽  
Vegetation Mapping ◽  
Good Choice ◽  
Machine Learning Algorithms ◽  
Support Vector ◽  
Tuning Parameters ◽  
Spectral Bands ◽  
Fodder Crops ◽  
Sentinel 2

<p><strong>Abstract.</strong> Mapping of the crop using satellite images is a challenging task due to complexities within field, and having the similar spectral properties with other crops in the region. Recently launched Sentinel-2 satellite has thirteen spectral bands, fast revisit time and resolution at three different level (10<span class="thinspace"></span>m, 20<span class="thinspace"></span>m, 60<span class="thinspace"></span>m), as well as the free availability of data, makes it a good choice for vegetation mapping. This study aims to classify crop using single date Sentinel-2 imagery in the Roorkee, district Haridwar, Uttarakhand, India. Classification is performed by using two most popular and efficient machine learning algorithms: Random Forest (RF) and Support Vector Machine (SVM). In this study, four spectral bands, i.e., Near Infrared, Red, Green, and Blue of Sentinel-2 satellite are stacked for the classification. Results show that overall accuracy of the classification achieved by RF and SVM using Sentinel-2 imagery are 84.22% and 81.85% respectively. This study demonstrates that both classifiers performed well by setting an optimal value of tuning parameters, but RF achieved 2.37% higher overall accuracy over SVM. Analysis of the results states that the class specific accuracies of High-Density Forest attain the highest accuracy whereas Fodder class reports the lowest accuracy. Fodder achieve lowest accuracy because there is an intermixing of pixels among Wheat and Fodder crops. In this study, it is found that RF shows better potential in classifying crops more accurately in comparison to SVM and Sentinel-2 has great potential in vegetation mapping domain in remote sensing.</p>

scholarly journals Distinction of surgically resected gastrointestinal stromal tumor by near-infrared hyperspectral imaging

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Daiki Sato ◽  
Toshihiro Takamatsu ◽  
Masakazu Umezawa ◽  
Yuichi Kitagawa ◽  
Kosuke Maeda ◽  
...  
Keyword(s):  
Machine Learning ◽  
Gastrointestinal Stromal Tumor ◽  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Submucosal Tumor ◽  
Stromal Tumor ◽  
Training Data ◽  
Support Vector ◽  
Gastric Gist ◽  
Mucosal Layer

AbstractThe diagnosis of gastrointestinal stromal tumor (GIST) using conventional endoscopy is difficult because submucosal tumor (SMT) lesions like GIST are covered by a mucosal layer. Near-infrared hyperspectral imaging (NIR-HSI) can obtain optical information from deep inside tissues. However, far less progress has been made in the development of techniques for distinguishing deep lesions like GIST. This study aimed to investigate whether NIR-HSI is suitable for distinguishing deep SMT lesions. In this study, 12 gastric GIST lesions were surgically resected and imaged with an NIR hyperspectral camera from the aspect of the mucosal surface. Thus, the images were obtained ex-vivo. The site of the GIST was defined by a pathologist using the NIR image to prepare training data for normal and GIST regions. A machine learning algorithm, support vector machine, was then used to predict normal and GIST regions. Results were displayed using color-coded regions. Although 7 specimens had a mucosal layer (thickness 0.4–2.5 mm) covering the GIST lesion, NIR-HSI analysis by machine learning showed normal and GIST regions as color-coded areas. The specificity, sensitivity, and accuracy of the results were 73.0%, 91.3%, and 86.1%, respectively. The study suggests that NIR-HSI analysis may potentially help distinguish deep lesions.

Fast inline tobacco classification by near-infrared hyperspectral imaging and support vector machine-discriminant analysis

2019 ◽  
Vol 11 (14) ◽  
pp. 1966-1975 ◽  
Author(s):  
Marcelo C. A. Marcelo ◽  
Frederico L. F. Soares ◽  
Jorge A. Ardila ◽  
Jailson C. Dias ◽  
Ricardo Pedó ◽  
...  
Keyword(s):  
Support Vector Machine ◽  
Discriminant Analysis ◽  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Classification Systems ◽  
Green Leaf ◽  
Support Vector ◽  
Chemical Characteristics ◽  
Tobacco Leaves

Classification systems are frequently used in tobacco Green Leaf Threshing (GLT) facilities to assess the chemical characteristics and quality of tobacco leaves.

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